Biochemistry and Molecular Genetics

Search results

• Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition

  Hoyland, C. N. (Contributor), Aldridge, C. (Contributor), Cleverley, R. M. (Contributor), Duchêne, M.-C. (Contributor), Minasov, G. (Contributor), Onopriyenko, O. (Contributor), Sidiq, K. (Contributor), Stogios, P. J. (Contributor), Anderson, W. F. (Contributor), Daniel, R. A. (Contributor), Savchenko, A. (Contributor), Vollmer, W. (Contributor) & Lewis, R. J. (Contributor), Protein Data Bank (PDB), May 21 2014

  DOI: 10.2210/pdb4OX5/pdb, https://www.wwpdb.org/pdb?id=pdb_00004ox5

  Dataset

• Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition

  Hoyland, C. N. (Contributor), Aldridge, C. (Contributor), Cleverley, R. M. (Contributor), Duchêne, M.-C. (Contributor), Minasov, G. (Contributor), Onopriyenko, O. (Contributor), Sidiq, K. (Contributor), Stogios, P. J. (Contributor), Anderson, W. F. (Contributor), Daniel, R. A. (Contributor), Savchenko, A. (Contributor), Vollmer, W. (Contributor) & Lewis, R. J. (Contributor), Protein Data Bank (PDB), Jun 11 2014

  DOI: 10.2210/pdb4OX3/pdb, https://www.wwpdb.org/pdb?id=pdb_00004ox3

  Dataset

• MassIVE MSV000087113 - A novel regulatory mechanism of U2 spliceosome proteostasis that controls the transcriptome and therapy response in cancer

  Goo, Y. A. (Creator), MassIVE, 2021

  DOI: 10.25345/c5tr42, https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?accession=MSV000087113

  Dataset

• Crystal structure of Probable acetyltransferase

  Brunzelle, J. S. (Contributor), Wu, R. (Contributor), Korolev, S. V. (Contributor), Collart, F. R. (Contributor), Joachimiak, A. (Contributor) & Anderson, W. F. (Contributor), Protein Data Bank (PDB), Jul 29 2003

  DOI: 10.2210/pdb1NSL/pdb, https://www.wwpdb.org/pdb?id=pdb_00001nsl

  Dataset

• 5F7S : Cycloalternan-degrading enzyme from Trueperella pyogenes

  Anderson, W. F. (Contributor), RCSB-PDB, 2015

  DOI: 10.2210/pdb5f7s/pdb, https://www.rcsb.org/structure/5F7S

  Dataset

• 5T79 : X-Ray Crystal Structure of a Novel Aldo-keto Reductases for the Biocatalytic Conversion of 3-hydroxybutanal to 1,3-butanediol

  Brunzelle, J. (Contributor), Evdokimova, E. (Contributor), Anderson, W. F. (Contributor), Savchenko, A. (Contributor) & Yakunin, A. F. (Contributor), RCSB-PDB, 2017

  DOI: 10.2210/pdb5t79/pdb, https://www.rcsb.org/structure/5T79

  Dataset

• 1HRU : THE STRUCTURE OF THE YRDC GENE PRODUCT FROM E.COLI

  Teplova, M. (Contributor), Tereshko, V. (Contributor), Sanishvili, R. (Contributor), Joachimiak, A. (Contributor), Bushueva, T. (Contributor), Anderson, W. F. (Contributor) & Egli, M. (Contributor), RCSB-PDB, 2001

  DOI: 10.2210/pdb1hru/pdb, https://www.rcsb.org/structure/1HRU

  Dataset

• 3IGX : 1.85 Angstrom Resolution Crystal Structure of Transaldolase B (talA) from Francisella tularensis.

  Minasov, G. (Contributor) & Anderson, W. F. (Contributor), RCSB-PDB, 2009

  DOI: 10.2210/pdb3igx/pdb, https://www.rcsb.org/structure/3IGX

  Dataset

• Genome-wide detection of enhancer-hijacking events from Hi-C data in re-arranged genomes

  Yue, F. (Creator), Code Ocean, 2021

  DOI: 10.24433/co.1323561.v1, https://codeocean.com/capsule/4345093/tree/v1

  Dataset

• 4R3C : Crystal structure of p38 alpha MAP kinase in complex with a novel isoform selective drug candidate

  Roy, S. M. (Contributor), Grum-Tokars, V. L. (Contributor), Minasov, G. (Contributor), Anderson, W. F. (Contributor) & Watterson, D. M. (Contributor), RCSB-PDB, 2015

  DOI: 10.2210/pdb4r3c/pdb, https://www.rcsb.org/structure/4R3C

  Dataset

• Cycloalternan-degrading enzyme from Trueperella pyogenes in complex with isomaltose

  Light, S. H. (Contributor), Cahoon, L. A. (Contributor), Mahasenan, K. V. (Contributor), Lee, M. (Contributor), Boggess, B. (Contributor), Halavaty, A. S. (Contributor), Mobashery, S. (Contributor), Freitag, N. E. (Contributor) & Anderson, W. F. (Contributor), Protein Data Bank (PDB), Dec 14 2016

  DOI: 10.2210/pdb5I0E/pdb, https://www.wwpdb.org/pdb?id=pdb_00005i0e

  Dataset

• Additional file 4 of MBD5 and MBD6 stabilize the BAP1 complex and promote BAP1-dependent cancer

  Tsuboyama, N. (Creator), Szczepanski, A. P. (Creator), Zhao, Z. (Creator) & Wang, L. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.21256770, https://springernature.figshare.com/articles/dataset/Additional_file_4_of_MBD5_and_MBD6_stabilize_the_BAP1_complex_and_promote_BAP1-dependent_cancer/21256770

  Dataset

• Crystal Structure of Ferredoxin-NADP Reductase from Salmonella typhimurium

  Anderson, W. F. (Contributor), Protein Data Bank (PDB), Feb 3 2009

  DOI: 10.2210/pdb3FPK/pdb, https://www.wwpdb.org/pdb?id=pdb_00003fpk

  Dataset

• 3GBX : Serine hydroxymethyltransferase from Salmonella typhimurium

  Anderson, W. F. (Contributor), RCSB-PDB, 2009

  DOI: 10.2210/pdb3gbx/pdb, https://www.rcsb.org/structure/3GBX

  Dataset

• Zic2, an enhancer-binding factor required for embryonic stem cell specification

  Luo, Z. (Contributor), Gao, X. (Contributor) & Shilatifard, A. (Contributor), Gene Expression Omnibus, Sep 8 2014

  https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE61188

  Dataset

• A study of Ali et al., Unprocessed Files_June 2022

  Ali, E. S. (Contributor) & Ben-Sahra, I. (Creator), Mendeley Data, 2022

  DOI: 10.17632/9zd4vncrf4.1, https://data.mendeley.com/datasets/9zd4vncrf4

  Dataset

• 2.35 Angstrom resolution structure of WecB (VC0917), a UDP-N-acetylglucosamine 2-epimerase from Vibrio cholerae.

  Anderson, W. F. (Contributor), Protein Data Bank (PDB), Aug 12 2008

  DOI: 10.2210/pdb3DZC/pdb, https://www.wwpdb.org/pdb?id=pdb_00003dzc

  Dataset

• 3OEX : Crystal Structure of Type I 3-Dehydroquinate Dehydratase (aroD) from Salmonella typhimurium with close loop conformation.

  Light, S. H. (Contributor), Minasov, G. (Contributor), Shuvalova, L. (Contributor) & Anderson, W. F. (Contributor), RCSB-PDB, 2010

  DOI: 10.2210/pdb3oex/pdb, https://www.rcsb.org/structure/3OEX

  Dataset

• Dodecameric structure of spermidine N-acetyltransferase from Vibrio cholerae in intermediate state

  Filippova, E. V. (Contributor), Weigand, S. (Contributor), Osipiuk, J. (Contributor), Kiryukhina, O. (Contributor), Joachimiak, A. (Contributor) & Anderson, W. F. (Contributor), Protein Data Bank (PDB), Oct 7 2015

  DOI: 10.2210/pdb4YGO/pdb, https://www.wwpdb.org/pdb?id=pdb_00004ygo

  Dataset

• High resolution structure of putative organic hydroperoxide resistance protein from Vibrio cholerae O1 biovar eltor str. N16961

  Anderson, W. F. (Contributor), Protein Data Bank (PDB), Oct 21 2008

  DOI: 10.2210/pdb3EER/pdb, https://www.wwpdb.org/pdb?id=pdb_00003eer

  Dataset

• 3EER : High resolution structure of putative organic hydroperoxide resistance protein from Vibrio cholerae O1 biovar eltor str. N16961

  Anderson, W. F. (Contributor), RCSB-PDB, 2008

  DOI: 10.2210/pdb3eer/pdb, https://www.rcsb.org/structure/3EER

  Dataset

• Stably-paused genes revealed through inhibition of transcription initiation by the TFIIH inhibitor Triptolide

  Chen, F. (Contributor), Gao, X. (Contributor), Shilatifard, A. (Contributor) & Shilatifard, A. (Contributor), ArrayExpress, 2015

  https://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-63314

  Dataset

• 1.55 Angstrom Crystal Structure of an Acetyl Esterase from Salmonella typhimurium

  Anderson, W. F. (Contributor), Protein Data Bank (PDB), Feb 24 2009

  DOI: 10.2210/pdb3GA7/pdb, https://www.wwpdb.org/pdb?id=pdb_00003ga7

  Dataset

• 3H0P : 2.0 Angstrom Crystal Structure of an Acyl Carrier Protein S-malonyltransferase from Salmonella typhimurium.

  Anderson, W. F. (Contributor), RCSB-PDB, 2009

  DOI: 10.2210/pdb3h0p/pdb, https://www.rcsb.org/structure/3H0P

  Dataset

• 3EEV : Crystal Structure of Chloramphenicol Acetyltransferase VCA0300 from Vibrio cholerae O1 biovar eltor

  Anderson, W. F. (Contributor), RCSB-PDB, 2008

  DOI: 10.2210/pdb3eev/pdb, https://www.rcsb.org/structure/3EEV

  Dataset