Biochemistry and Molecular Genetics

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  • 2021

    Chromatin reprogramming via contact guidance-induced nuclear deformation promotes stem cell differentiation

    Agrawal, V., Wang, X., Li, Y., Virk, R. K. A., Patel, P. A., Jain, S., Rivera-Bolanos, N., Frederick, J., Roth, E., Bleher, R., Duan, C., Jiang, B., Ntziachristos, P., Backman, V. & Ameer, G. A., 2021, Bio-Optics: Design and Application, BODA 2021. Optica Publishing Group (formerly OSA), DTu1A.1. (Optics InfoBase Conference Papers).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • 2020

    Plasma start-up experiment and modelling on the TST-2 spherical tokamak

    Takase, Y., Ejiri, A., Tsujii, N., Yajima, S., Aoi, Y., Iida, Y., Iwasaki, K., Kawamata, Y., Ko, Y., Matsuzaki, K., Moeller, C. P., Peng, Y., Rice, J., Sakamoto, S., Yamazaki, H. & Yoshida, Y., Sep 16 2020, 23rd Topical Conference on Radiofrequency Power in Plasmas. Bonoli, P. T., Pinsker, R. I. & Wang, X. (eds.). American Institute of Physics Inc., 80009. (AIP Conference Proceedings; vol. 2254).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    Open Access
  • 2017

    HiCComp: Multiple-level comparative analysis of Hi-C data by triplet network

    Zhang, Y., Zhang, B., Zheng, W. J., Tang, J. & Yue, F., Dec 15 2017, Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017. Yoo, I., Zheng, J. H., Gong, Y., Hu, X. T., Shyu, C.-R., Bromberg, Y., Gao, J. & Korkin, D. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 92-96 5 p. (Proceedings - 2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017; vol. 2017-January).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    1 Scopus citations
  • 2016

    CS2A: A Compressed Suffix Array-Based Method for Short Read Alignment

    Huo, H., Sun, Z., Li, S., Vitter, J. S., Wang, X., Yu, Q. & Huan, J., Dec 15 2016, Proceedings - DCC 2016: 2016 Data Compression Conference. Marcellin, M. W., Bilgin, A., Serra-Sagrista, J. & Storer, J. A. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 271-278 8 p. 7786171. (Data Compression Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    11 Scopus citations

  • Transcriptional enhancers: Bridging the genome and phenome

    Ren, B. & Yue, F., 2016, 21st Century Genetics Genes at Work, 2015. Grodzicker, T., Stillman, B. & Stewart, D. (eds.). Cold Spring Harbor Laboratory Press, p. 17-26 10 p. (Cold Spring Harbor Symposia on Quantitative Biology; vol. 80).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    Open Access
    22 Scopus citations
  • 2013

    Classifying aging genes into DNA repair or non-DNA repair-related categories

    Fang, Y., Wang, X., Michaelis, E. K. & Fang, J., 2013, Intelligent Computing Theories and Technology - 9th International Conference, ICIC 2013, Proceedings. p. 20-29 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7996 LNAI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    13 Scopus citations
  • 2010

    CloudProphet: Automating Performance Prediction for Cloud Services

    Li, Z., Zhang, M., Zhu, Z., Chen, Y., Greenburg, A. & Wang, Y.-M., 2010, Proceedings of USENIX Symposium on Networked Systems Design and Implementation (NSDI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Scanning multiple samples simultaneously in tube-based microCT systems

    Stock, S. R., Rajamannan, N. M., Spelsberg, T. C., Malayannan, S., Riaz, R., Polavarapu, M., Hsu, E. L., Hsu, W. K., Chen, Y. & Zhang, M., 2010, Developments in X-Ray Tomography VII. 78041J. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 7804).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • 2008

    A new approach for tree alignment based on local re-optimization

    Yue, F. & Tang, J., Sep 17 2008, BioMedical Engineering and Informatics: New Development and the Future - Proceedings of the 1st International Conference on BioMedical Engineering and Informatics, BMEI 2008. p. 34-38 5 p. 4548631. (BioMedical Engineering and Informatics: New Development and the Future - Proceedings of the 1st International Conference on BioMedical Engineering and Informatics, BMEI 2008; vol. 1).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    3 Scopus citations
  • 2007

    A divide-and-conquer implementation of three sequence alignment and ancestor inference

    Yue, F. & Tang, J., 2007, Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007. p. 143-150 8 p. 4413048. (Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    9 Scopus citations

  • A heuristic for phylogenetic reconstruction using transposition

    Yue, F., Zhang, M. & Tang, J., 2007, Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE. p. 802-808 7 p. 4375652. (Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    1 Scopus citations
  • 2002

    Regulation and biochemistry of exopolysaccharide synthesis of the fire blight pathogen Erwinia amylovora and pear pathogens from Korea and Japan

    Geider, K., Du, Z., Hildebrand, M., Kim, W. S., Menggad, M. & Schollmeyer, M., 2002, IX International Workshop on Fire Blight. International Society for Horticultural Science, p. 457-461 5 p. (Acta Horticulturae; vol. 590).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    1 Scopus citations