Fingerprint The fingerprint is based on mining the text of the scientific documents related to the associated persons. Based on that an index of weighted terms is created, which defines the key subjects of research unit

RNA Sequence Analysis Medicine & Life Sciences
RNA Medicine & Life Sciences
Genome-Wide Association Study Medicine & Life Sciences
Single Nucleotide Polymorphism Medicine & Life Sciences
Bone Morphogenetic Protein 4 Medicine & Life Sciences
HapMap Project Medicine & Life Sciences
Gene Expression Profiling Medicine & Life Sciences
Genomics Medicine & Life Sciences

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No photo of Rex L Chisholm

Rex L Chisholm

Person: Academic

No photo of Elizabeth M McNally

Elizabeth M McNally

Person: Academic


Research Output 2000 2015

Evaluation of commercially available RNA amplification kits for RNA sequencing using very low input amounts of total RNA

Shanker, S., Paulson, A., Edenberg, H. J., Peak, A., Perera, A., Alekseyev, Y. O., Beckloff, N., Bivens, N. J., Donnelly, R., Gillaspy, A. F., Grove, D., Gu, W., Jafari, N., Kerley-Hamilton, J. S., Lyons, R. H., Tepper, C. & Nicolet, C. M., Jan 1 2015, In : Journal of Biomolecular Techniques. 26, 1, p. 4-18 15 p.

Research output: Contribution to journalArticle

RNA Sequence Analysis
Gene Expression Profiling
Complementary DNA
309 Citations

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium

Su, Z., Łabaj, P. P., Li, S., Thierry-Mieg, J., Thierry-Mieg, D., Shi, W., Wang, C., Schroth, G. P., Setterquist, R. A., Thompson, J. F., Jones, W. D., Xiao, W., Xu, W., Jensen, R. V., Kelly, R., Xu, J., Conesa, A., Furlanello, C., Gao, H., Hong, H. & 30 othersJafari, N., Letovsky, S., Liao, Y., Lu, F., Oakeley, E. J., Peng, Z., Praul, C. A., Santoyo-Lopez, J., Scherer, A., Shi, T., Smyth, G. K., Staedtler, F., Sykacek, P., Tan, X. X., Thompson, E. A., Vandesompele, J., Wang, M. D., Wang, J., Wolfinger, R. D., Zavadil, J., Auerbach, S. S., Bao, W., Binder, H., Blomquist, T., Brilliant, M. H., Bushel, P. R., Cai, W., Catalano, J. G., Chang, C. W. & Chen, T., Sep 1 2014, In : Nature biotechnology. 32, 9, p. 903-914 12 p.

Research output: Contribution to journalArticle

RNA Sequence Analysis
Quality Control
Quality control
Polymerase Chain Reaction
36 Citations

Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures

Munro, S. A., Lund, S. P., Pine, P. S., Binder, H., Clevert, D. A., Conesa, A., Dopazo, J., Fasold, M., Hochreiter, S., Hong, H., Jafari, N., Kreil, D. P., Łabaj, P. P., Li, S., Liao, Y., Lin, S. M., Meehan, J., Mason, C. E., Santoyo-Lopez, J., Setterquist, R. A. & 13 othersShi, L., Shi, W., Smyth, G. K., Stralis-Pavese, N., Su, Z., Tong, W., Wang, C., Wang, J., Xu, J., Ye, Z., Yang, Y., Yu, Y. & Salit, M., Jan 1 2014, In : Nature communications. 5, 5125.

Research output: Contribution to journalArticle

gene expression
Gene expression
Gene Expression

Grants 2007 2019

Vascular Endothelial Growth Factor A
Sea Urchins
Gene Regulatory Networks
Embryonic Structures
Cytokine Receptors
Eosinophilic Esophagitis