Feinberg School of Medicine

Research Output

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Conference article
2019

Detecting potential pleiotropy across cardiovascular and neurological diseases using univariate, bivariate, and multivariate methods on 43,870 individuals from the eMERGE network

Zhang, X., Veturi, Y., Verma, S., Bone, W., Verma, A., Lucas, A., Hebbring, S., Denny, J. C., Stanaway, I. B., Jarvik, G. P., Crosslin, D., Larson, E. B., Rasmussen-Torvik, L., Pendergrass, S. A., Smoller, J. W., Hakonarson, H., Sleiman, P., Weng, C., Fasel, D., Wei, W. Q. & 4 others, Kullo, I., Schaid, D., Chung, W. K. & Ritchie, M. D., 2019, In : Pacific Symposium on Biocomputing. 24, 2019, p. 272-283 12 p.

Research output: Contribution to journalConference article

2 Scopus citations
2018

Convergent downstream candidate mechanisms of independent intergenic polymorphisms between co-classified diseases implicate epistasis among noncoding elements

Han, J., Li, J., Achour, I., Pesce, L., Foster, I., Li, H. & Lussier, Y. A., Jan 1 2018, In : Pacific Symposium on Biocomputing. 0, 212669, p. 524-535 12 p.

Research output: Contribution to journalConference article

1 Scopus citations

Measuring awe and critical thinking in a science museum

Price, C. A., Greenslit, J., Applebaum, L. R., Segovia, G., Slagel, C., Quinn, K. A. & Krogh-Jespersen, S., Jan 1 2018, In : Proceedings of International Conference of the Learning Sciences, ICLS. 3, 2018-June, p. 1473-1474 2 p.

Research output: Contribution to journalConference article

2017

Classifying user types on social media to inform who-what-where coordination during crisis response

Purohit, H. & Chan, J., 2017, In : Proceedings of the International ISCRAM Conference. 2017-May, p. 656-665 10 p.

Research output: Contribution to journalConference article

4 Scopus citations

Food watch: Detecting and characterizing eating episodes through feeding gestures

Zhang, S., Alharbi, R., Stogin, W., Pourhomayun, M., Spring, B. & Alshurafa, N., Jan 1 2017, In : BodyNets International Conference on Body Area Networks.

Research output: Contribution to journalConference article

1 Scopus citations

Genome-wide interaction with selected type 2 diabetes loci reveals novel loci for type 2 diabetes in african americans

Keaton, J. M., Hellwege, J. N., Ng, M. C. Y., Palmer, N. D., Pankow, J. S., Fornage, M., Wilson, J. G., Correa, A., Rasmussen-Torvik, L. J., Rotter, J. I., Chen, Y. D. I., Taylor, K. D., Rich, S. S., Wagenknecht, L. E., Freedman, B. I. & Bowden, D. W., 2017, In : Pacific Symposium on Biocomputing. 0, 212679, p. 242-253 12 p.

Research output: Contribution to journalConference article

5 Scopus citations

Imaging genomics

Shen, L. & Cooper, L. A. D., Jan 1 2017, In : Pacific Symposium on Biocomputing. 0, 212679, p. 51-57 7 p.

Research output: Contribution to journalConference article

2 Scopus citations

SmartNecklace: Designing a wearable multi-sensor system for smart eating detection

Cohen, E., Stogin, W., Kalantarian, H., Pfammatter, A. F., Spring, B. & Alshurafa, N., Jan 1 2017, In : BodyNets International Conference on Body Area Networks.

Research output: Contribution to journalConference article

2016

A people & purpose approach to humanitarian data information security and privacy

Chan, J. L., Bateman, L. & Olafsson, G., Jan 1 2016, In : Procedia Engineering. 159, p. 3-5 3 p.

Research output: Contribution to journalConference article

2 Scopus citations
2015

Tactile proprioceptive input in robotic rehabilitation after stroke

Tzorakoleftherakis, E., Bengtson, M. C., Mussa-Ivaldi, F., Scheidt, R. A. & Murphey, T. D., Jun 29 2015, In : Proceedings - IEEE International Conference on Robotics and Automation. 2015-June, June, p. 6475-6481 7 p., 7140109.

Research output: Contribution to journalConference article

8 Scopus citations
2014

Fluorescence micro-tomography of frozen-hydrated whole cells using the bionanoprobe

Chen, S., Flachenecker, C., Paunesku, T., Yuan, Y., Liu, W., Deng, J., Jin, Q., Wak, R., Lai, B., Hornberger, B., Roehrig, C., Von Osinski, J., Bolbat, M., Maser, J., Shu, D., Gleber, S., Finney, L., Brister, K., Jacobsen, C., Woloschak, G. & 1 others, Vogt, S., Aug 1 2014, In : Microscopy and Microanalysis. 20, 3, p. 668-669 2 p.

Research output: Contribution to journalConference article

Innovative research design - A journey into the information typhoon

Chan, J. L. & Comes, T., Jan 1 2014, In : Procedia Engineering. 78, p. 52-58 7 p.

Research output: Contribution to journalConference article

17 Scopus citations
2013

Integrated cTAKES for concept mention detection and normalization

Liu, H., Wagholikar, K., Jonnalagadda, S. & Sohn, S., Jan 1 2013, In : CEUR Workshop Proceedings. 1179

Research output: Contribution to journalConference article

1 Scopus citations

Mapping the subcellular localization of Fe3O 4@TiO2 nanoparticles by X-ray Fluorescence Microscopy

Yuan, Y., Chen, S., Gleber, S. C., Lai, B., Brister, K., Flachenecker, C., Wanzer, B., Paunesku, T., Vogt, S. & Woloschak, G. E., Jan 1 2013, In : Journal of Physics: Conference Series. 463, 1, 012020.

Research output: Contribution to journalConference article

1 Scopus citations

Multi-criteria optimization based experimental design for parameter estimation of a double feedback gene switching model

Maheshwari, V., Kandpal, M. & Samavedham, L., Jan 1 2013, In : IFAC Proceedings Volumes (IFAC-PapersOnline). 12, PART 1, p. 333-337 5 p.

Research output: Contribution to journalConference article

2 Scopus citations
2012

Discrimination of springs with vision, proprioception, and artificial skin stretch cues

Gurari, N., Wheeler, J., Shelton, A. & Okamura, A. M., Dec 1 2012, In : Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 7282 LNCS, PART 1, p. 160-172 13 p.

Research output: Contribution to journalConference article

1 Scopus citations
2010

Monitoring cerebrovascular pressure reactivity with rheoencephalography

Brady, K. M., Mytar, J. O., Kibler, K. K., Easley, R. B., Koehler, R. C., Czosnyka, M., Smielewski, P., Zweifel, C., Bodo, M., Pearce, F. J. & Armonda, R. A., Jan 1 2010, In : Journal of Physics: Conference Series. 224, 1, 012089.

Research output: Contribution to journalConference article

7 Scopus citations

Tracking the arcuate fasciculus in patients with aphasia

Schnell, S., Copland, D., Heath, S., Van Hees, S., Holmes, A., De Zubicaray, G. & McMahon, K., 2010, In : Procedia - Social and Behavioral Sciences. 6, p. 86-87 2 p.

Research output: Contribution to journalConference article

2009

Empowering the autonomy of children with cognitive and physical impairments by inertial head tracking

Raya, R., Ceres, R., Rocon, E. & Pons, J. L., Sep 2009, In : Procedia Chemistry. 1, 1, p. 726-729 4 p.

Research output: Contribution to journalConference article

Open Access

On the use of inertial measurement units for real-time quantification of pathological tremor amplitude and frequency

Gallego, J. A., Rocon, E., Roa, J. O., Moreno, J. C., Koutsou, A. D. & Pons, J. L., Sep 2009, In : Procedia Chemistry. 1, 1, p. 1219-1222 4 p.

Research output: Contribution to journalConference article

Open Access
7 Scopus citations

Optical stimulation in mice lacking the TRPV1 channel

Suh, E., Matic, A. I., Otting, M., Walsh, J. T. & Richter, C. P., Jun 1 2009, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 7180, 71800S.

Research output: Contribution to journalConference article

17 Scopus citations

Stimulation of the human auditory nerve with optical radiation

Fishman, A., Matic, A. I., Winkler, P., Mierzwinski, J., Beuth, W., Siedlecki, Z., Teudt, I., Maier, H. & Richter, C. P., 2009, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 7180, 71800M.

Research output: Contribution to journalConference article

3 Scopus citations
2007

EMD: A novel technique for the study of tremor time series

Rocon de Lima, E., Andrade, A. O., Pons, J. L., Kyberd, P. & Nasuto, S. J., 2007, In : IFMBE Proceedings. 14, 1, p. 992-996 5 p.

Research output: Contribution to journalConference article

Evaluation of a new sitting concept designed for prevention of pressure ulcer on the buttock using finite element analysis

Lim, D., Lin, F., Hendrix, R. & Makhsous, M., Jan 1 2007, In : IFMBE Proceedings. 14, 1, p. 2885-2888 4 p.

Research output: Contribution to journalConference article

Heat map visualizations allow comparison of multiple clustering results and evaluation of dataset quality: Application to microarray data

Sharko, J., Grinstein, G. G., Marx, K. A., Zhou, J., Cheng, C. H., Odelberg, S. & Simon, H-G., Oct 23 2007, In : Proceedings of the International Conference on Information Visualisation. p. 521-526 6 p., 4272030.

Research output: Contribution to journalConference article

11 Scopus citations

TumorAGENT – An interdisciplinary tumor database for translational research in breast cancer

Kurek, R., Babel, R., Clare, S., Endress, A., Faessler, V., Fischbach, O., Keckeisen, M., Loeffler, H., Neubauer, H., Solomayer, E., Wallwiener, D. & Fehm, T., 2007, In : IFMBE Proceedings. 14, 1, p. 413-416 4 p.

Research output: Contribution to journalConference article

1 Scopus citations
2006
4 Scopus citations

Question answering experiments and resources

Katz, B., Marton, G., Felshin, S., Loreto, D., Lu, B., Mora, F., Uzuner, O., McGraw-Herdeg, M., Cheung, N., Luo, Y., Radul, A., Shen, Y. & Zaccak, G., Dec 1 2006, In : NIST Special Publication.

Research output: Contribution to journalConference article

2005

Pulse duration spectra and measurements for laser scanning microscope systems

Wokosin, D. L., Jul 21 2005, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5700, p. 1-13 13 p., 02.

Research output: Contribution to journalConference article

5 Scopus citations
2004

3D tissue distribution patterns characterized by micro-CT

Wagoner Johnson, A. J., Wojtowicz, A. M., Dellinger, J. G., Jamison, R. D., Ignatiev, K. I. & Stock, S. R., Dec 1 2004, In : Materials Research Society Symposium Proceedings. EXS, 1, p. 65-67 3 p., F5.18.

Research output: Contribution to journalConference article

2 Scopus citations

Abnormal intrinsic and reflex stiffness related to impaired voluntary movement

Mirbagheri, M. M., Tsao, C. C. & Rymer, W. Z., Dec 1 2004, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 26 VII, p. 4680-4683 4 p.

Research output: Contribution to journalConference article

4 Scopus citations

A device for radiofrequency assisted hepatic resection

Haemmerich, D., Schutt, D. J., Will, J. A., Striegel, R. M., Webster, J. G. & Mahvi, D. M., Dec 1 2004, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 26 IV, p. 2503-2506 4 p.

Research output: Contribution to journalConference article

8 Scopus citations

Analysis of the surface electrocardiogram to predict termination of atrial fibrillation: The 2004 computers in cardiology/physioNet challenge

Petrutiu, S., Sahakian, A. V., Ng, J. & Swiryn, S., Dec 1 2004, In : Computers in Cardiology. 31, p. 105-108 4 p.

Research output: Contribution to journalConference article

30 Scopus citations

An autonomous control and monitoring system for a lower limb orthosis: The gait project case

Moreno, J. C., Brunetti, F. J. & Pons, J. L., 2004, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 26 III, p. 2125-2128 4 p.

Research output: Contribution to journalConference article

6 Scopus citations

An evaluation of Ultrasonic motors as driving technology in impedance controlled robots

Pons, J. L., Rodríguez, H. & Rocon, E., Jul 5 2004, In : Proceedings - IEEE International Conference on Robotics and Automation. 2004, 4, p. 4065-4070 6 p.

Research output: Contribution to journalConference article

A novel system for the assessment of mitral annular geometry and analysis of 3D motion of the mitral annulus from 3D echocardiography

Saracino, G., Daimon, M., Greenberg, N. L., Shiota, T. & Thomas, J. D., Dec 1 2004, In : Computers in Cardiology. 31, p. 69-72 4 p.

Research output: Contribution to journalConference article

5 Scopus citations

A subject-specific FEM model for evaluating buttock tissue response under sitting load

Lin, F., Moran, B., Bankard, J., Hendrix, R. & Makhsous, M., Dec 1 2004, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 26 VII, p. 5088-5091 4 p.

Research output: Contribution to journalConference article

9 Scopus citations

Beta A versus beta B: Is it merely a matter of expression?

Thompson, T. B., Cook, R. W., Chapman, S. C., Jardetzky, T. S. & Woodruff, T. K., Oct 15 2004, In : Molecular and Cellular Endocrinology. 225, 1-2, p. 9-17 9 p.

Research output: Contribution to journalConference article

55 Scopus citations

Gabor filter-based automated strain computation from tagged MR images

Manglik, T., Cernicanu, A., Pai, V., Kim, D., Chen, T., Dugal, P., Batchu, B. & Axel, L., Jan 1 2004, In : Lecture Notes in Computer Science. 3217, 1 PART 2, p. 1064-1066 3 p.

Research output: Contribution to journalConference article

Open Access
2 Scopus citations

Hysteresis compensation in a magnetostrictive linear position sensor

Seco, F., Martín, J. M., Pons, J. L. & Jiménez, A. R., Feb 1 2004, In : Sensors and Actuators, A: Physical. 110, 1-3, p. 247-253 7 p.

Research output: Contribution to journalConference article

28 Scopus citations

Interaction between cellular voltage-sensitive conductance and network parameters in a model of neocortex can generate epileptiform bursting

Van Drongelen, W., Lee, H. C., Koch, H., Elsen, F., Carroll, M. S., Hereld, M. & Stevens, R. L., Jan 1 2004, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 26 VI, p. 4003-4005 3 p.

Research output: Contribution to journalConference article

7 Scopus citations

Left ventricle quantification in 3D echocardiography using a geometric deformable model

Hang, X., Greenberg, N. L. & Thomas, J. D., Dec 1 2004, In : Computers in Cardiology. 31, p. 649-652 4 p.

Research output: Contribution to journalConference article

5 Scopus citations

Measurement of ankle spasticity in children with cerebral palsy using a manual spasticity evaluator

Peng, Q., Shah, P. K., Selles, R. W., Gaebler-Spira, D. J. & Zhang, L. Q., Dec 1 2004, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 26 VII, p. 4896-4899 4 p.

Research output: Contribution to journalConference article

12 Scopus citations

Mechanical actions of individual muscles at the human elbow joint and their roles in protecting/unloading the ulnar collateral ligament

Peng, Q., Schafer, D., Hsu, J., Koh, J. & Zhang, L. Q., Dec 1 2004, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 26 VII, p. 4704-4705 2 p.

Research output: Contribution to journalConference article

1 Scopus citations

MicroCT of sea urchin ossicles supplemented with microbeam diffraction

Stock, S. R., Ignatiev, K. I., Veis, A., DeCarlo, F. & Almer, J. D., Dec 1 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5535, p. 11-20 10 p., 02.

Research output: Contribution to journalConference article

3 Scopus citations

Modelling of piezoelectric transducers applied to piezoelectric motors: A comparative study and new perspective

Pons, J. L., Rodríguez, H., Seco, F., Ceres, R. & Calderón, L., Feb 1 2004, In : Sensors and Actuators, A: Physical. 110, 1-3, p. 336-343 8 p.

Research output: Contribution to journalConference article

15 Scopus citations

Motor imagery classification by means of source analysis methods

Qin, L., Deng, J., Ding, L. & He, B., Dec 1 2004, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 26 VI, p. 4356-4358 3 p.

Research output: Contribution to journalConference article

2 Scopus citations

Newt limb regeneration studied with synchrotron microCT

Stock, S. R., Ignatiev, K. I., Simon, H-G. & De Carlo, F., Dec 1 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5535, p. 748-756 9 p., 86.

Research output: Contribution to journalConference article

2 Scopus citations

NMR and μSR investigation of spin dynamics in {Mo72Fe 30} molecular clusters

Micotti, E., Procissi, D., Lascialfari, A., Carretta, P., Kögerler, P., Borsa, F., Luban, M. & Baines, C., May 1 2004, In : Journal of Magnetism and Magnetic Materials. 272-276, p. 1099-1101 3 p.

Research output: Contribution to journalConference article

5 Scopus citations

Pathological calcifications studied with microCT

Stock, S. R., Rajamannan, N. M., Brooks, E. R., Langman, C. & Pachman, L. M., Dec 1 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5535, p. 424-431 8 p., 45.

Research output: Contribution to journalConference article

2 Scopus citations