Life Sciences Graduate Programs

Research Output

Evaluation of a remote training approach for teaching seniors to use a telehealth system

Lai, A. M., Kaufman, D. R., Starren, J. & Shea, S., Nov 1 2009, In : International Journal of Medical Informatics. 78, 11, p. 732-744 13 p.

Research output: Contribution to journalArticle

24 Scopus citations

Evaluation of consumer health website accessibility by users with sensory and physical disabilities.

Chiang, M. F. & Starren, J., 2004, In : Medinfo. MEDINFO. 11, Pt 2, p. 1128-1132 5 p.

Research output: Contribution to journalArticle

8 Scopus citations

Evaluation of data discretization methods to derive platform independent isoform expression signatures for multi-class tumor subtyping

Jung, S., Bi, Y. & Davuluri, R. V., Nov 10 2015, In : BMC Genomics. 16, 11, S3.

Research output: Contribution to journalArticle

6 Scopus citations

Evaluation of gene prediction software using a genomic data set: Application to Arabidopsis thaliana sequences

Pavy, N., Rombauts, S., Déhais, P., Mathé, C., Ramana, D. V. V., Leroy, P. & Rouzé, P., Nov 1999, In : Bioinformatics. 15, 11, p. 887-899 13 p.

Research output: Contribution to journalArticle

72 Scopus citations

Evaluation of the google search appliance for patient cohort discovery.

Oberg, R., Rasmussen, L., Melski, J., Peissig, P. & Starren, J., Jan 1 2008, In : AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 1 p.

Research output: Contribution to journalArticle

4 Scopus citations

Evidence for chromosome 2p16.3 polycystic ovary syndrome susceptibility locus in affected women of European ancestry

Mutharasan, P., Galdones, E., Bernabé, B. P., Garcia, O. A., Jafari, N., Shea, L. D., Woodruff, T. K., Legro, R. S., Dunaif, A. & Urbanek, M., Jan 2013, In : Journal of Clinical Endocrinology and Metabolism. 98, 1, p. E185-E190

Research output: Contribution to journalArticle

85 Scopus citations

Ewald, J Richard

Hain, T. C., Jan 1 2014, Encyclopedia of the Neurological Sciences. Elsevier Inc., p. 232 1 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Expression analysis of BACE2 in brain and peripheral tissues

Bennett, B. D., Babu-Khan, S., Loeloff, R., Louis, J. C., Curran, E., Citron, M. & Vassar, R., Jul 7 2000, In : Journal of Biological Chemistry. 275, 27, p. 20647-20651 5 p.

Research output: Contribution to journalArticle

238 Scopus citations

Expression and functional reconstitution of IL-18 receptor in K562 leukemia cells

Zhang, B., Cao, Z. Y., Wu, K. F. & Lin, Y. M., Oct 1 2003, In : Leukemia Research. 27, 10, p. 971-972 2 p.

Research output: Contribution to journalLetter

3 Scopus citations

Expression and production of bioactive human interleukin-18 in transgenic tobacco plants

Zhang, B., Yang, Y. H., Lin, Y. M., Rao, Q., Zheng, G. G. & Wu, K. F., Oct 1 2003, In : Biotechnology Letters. 25, 19, p. 1629-1635 7 p.

Research output: Contribution to journalArticle

18 Scopus citations

Expression and regulation of interleukin-23 subunits in human peripheral blood mononuclear cells and hematopoietic cell lines in response to various inducers

Ma, X. T., Zhang, X. J., Zhang, B., Geng, Y. Q., Lin, Y. M., Li, G. & Wu, K. F., Oct 1 2004, In : Cell Biology International. 28, 10, p. 689-697 9 p.

Research output: Contribution to journalArticle

18 Scopus citations

Expression and significance of IL-18 in the bone marrow of patients with hematological diseases

Zhang, B., Rao, Q., Zheng, G., Cao, Z., Ma, X., Li, G., Lin, Y., Geng, Y. & Wu, K., Feb 1 2003, In : Chinese Medical Journal. 116, 2, p. 218-221 4 p.

Research output: Contribution to journalArticle

5 Scopus citations

Expression of bioactive human M-CSF soluble receptor in transgenic tobacco plants

Zheng, G. G., Yang, Y. H., Rao, Q., Lin, Y. M., Zhang, B. & Wu, K. F., Apr 1 2006, In : Protein Expression and Purification. 46, 2, p. 367-373 7 p.

Research output: Contribution to journalArticle

3 Scopus citations

Expression of IL-18 and its receptor in human leukemia cells

Zhang, B., Ma, X. T., Zheng, G. G., Li, G., Rao, Q. & Wu, K. F., Sep 1 2003, In : Leukemia Research. 27, 9, p. 813-822 10 p.

Research output: Contribution to journalArticle

16 Scopus citations

Expression of LL-37/hCAP-18 gene in human leukemia cells

Yang, Y. H., Zheng, G. G., Li, G., Zhang, B., Song, Y. H. & Wu, K. F., Oct 1 2003, In : Leukemia Research. 27, 10, p. 947-950 4 p.

Research output: Contribution to journalArticle

22 Scopus citations

Expression of ovarian inhibin during pregnancy in the rat

Woodruff, T. K., Ackland, J., Rahal, J. O., Schwartz, N. B. & Mayo, K. E., Mar 1991, In : Endocrinology. 128, 3, p. 1647-1654 8 p.

Research output: Contribution to journalArticle

12 Scopus citations

Expressiveness of the Breast Imaging Reporting and Database System (BI-RADS)

Starren, J. & Johnson, S. M., Jan 1 1997, In : Journal of the American Medical Informatics Association. 4, SUPPL., p. 655-659 5 p.

Research output: Contribution to journalArticle

12 Scopus citations

Eye movements as probes of lexico-semantic processing in a patient with primary progressive aphasia

Seckin, M., Mesulam, M. M., Rademaker, A. W., Voss, J. L., Weintraub, S., Rogalski, E. J. & Hurley, R. S., Jan 2 2016, In : Neurocase. 22, 1, p. 65-75 11 p.

Research output: Contribution to journalArticle

2 Scopus citations

Factors Affecting Fertility Decision-Making Among Transgender Adolescents and Young Adults

Chen, D., Kyweluk, M. A., Sajwani, A., Gordon, E. J., Johnson, E. K., Finlayson, C. A. & Woodruff, T. K., Apr 1 2019, In : LGBT Health. 6, 3, p. 107-115 9 p.

Research output: Contribution to journalArticle

Open Access
8 Scopus citations

False recognition of incidentally learned pictures and words in primary progressive aphasia

Rogalski, E., Blum, D., Rademaker, A. & Weintraub, S., Jan 1 2007, In : Neuropsychologia. 45, 2, p. 368-377 10 p.

Research output: Contribution to journalArticle

12 Scopus citations

Federal demonstation project tackles diabetes with telemedicine.

Starren, J., Jan 1 2005, In : Caring : National Association for Home Care magazine. 24, 1, p. 6-10 5 p.

Research output: Contribution to journalArticle

Female fertility in the cancer setting: availability and quality of online health information

de Man, A. M., Rashedi, A., Nelen, W., Anazodo, A., Rademaker, A., de Roo, S., Beerendonk, C. & Woodruff, T. K., Jul 2 2020, In : Human Fertility. 23, 3, p. 170-178 9 p.

Research output: Contribution to journalArticle

3 Scopus citations

Female oncofertility attitude and knowledge: A survey of reproductive health professionals in Shanghai, China

Wang, Y., Chen, H., Ju, K., Kopp, M. F., Johnson, S. B., Farrell, K. K., Yuan, G., Ataman, L. M., Zheng, W., Woodruff, T. K. & Xiao, S., Feb 2019, In : Future Oncology. 15, 4, p. 371-379 9 p.

Research output: Contribution to journalArticle

1 Scopus citations

Female reproductive disorders: the roles of endocrine-disrupting compounds and developmental timing

Crain, D. A., Janssen, S. J., Edwards, T. M., Heindel, J., Ho, S. M., Hunt, P., Iguchi, T., Juul, A., McLachlan, J. A., Schwartz, J., Skakkebaek, N., Soto, A. M., Swan, S., Walker, C., Woodruff, T. K., Woodruff, T. J., Giudice, L. C. & Guillette, L. J., Oct 2008, In : Fertility and Sterility. 90, 4, p. 911-940 30 p.

Research output: Contribution to journalArticle

280 Scopus citations

Fertility Lost-Fertility Found: Narratives from the Leading Edge of Oncofertility

Woodruff, T. K., 2017, In : Narrative inquiry in bioethics. 7, 2, p. 147-150 4 p.

Research output: Contribution to journalArticle

2 Scopus citations

Fertility-Related Care for Gender and Sex Diverse Individuals: A Provider Needs-Assessment Survey

Johnson, E. K., Chen, DI., Gordon, E. J., Rosoklija, I., Holl, J. L. & Finlayson, C., Jan 2016, In : Transgender Health. 1, 1, p. 197-201 5 p.

Research output: Contribution to journalArticle

Open Access
5 Scopus citations

Fluctuating vestibulo-ocular reflex in ménière's disease

Yacovino, D. A., Hain, T. C. & Musazzi, M., Jan 1 2017, In : Otology and Neurotology. 38, 2, p. 244-247 4 p.

Research output: Contribution to journalArticle

7 Scopus citations

Fly-QMA: Automated analysis of mosaic imaginal discs in Drosophila

Bernasek, S. M., Peláez, N., Carthew, R. W., Bagheri, N. & Amaral, L. A. N., Jan 1 2020, In : PLoS computational biology. 16, 3, e1007406.

Research output: Contribution to journalArticle

Open Access

Follicle microenvironment-associated alterations in gene expression in the mouse oocyte and its polar body

Jiao, Z. X. & Woodruff, T. K., Apr 2013, In : Fertility and Sterility. 99, 5, p. 1453-1459e1

Research output: Contribution to journalArticle

9 Scopus citations

Frequency of serum creatinine changes in the absence of iodinated contrast material: Implications for studies of contrast nephrotoxicity

Newhouse, J. H., Kho, D., Rao, Q. A. & Starren, J., Aug 15 2008, In : American Journal of Roentgenology. 191, 2, p. 376-382 7 p.

Research output: Contribution to journalArticle

235 Scopus citations

Frontotemporal networks and behavioral symptoms in primary progressive aphasia

D'Anna, L., Mesulam, M. M., Thiebaut De Schotten, M., Dell'Acqua, F., Murphy, D., Wieneke, C., Martersteck, A., Cobia, D., Rogalski, E. & Catani, M., Apr 12 2016, In : Neurology. 86, 15, p. 1393-1399 7 p.

Research output: Contribution to journalArticle

15 Scopus citations

FTO-Dependent N6-Methyladenosine Modifications Inhibit Ovarian Cancer Stem Cell Self-Renewal by Blocking cAMP Signaling

Huang, H., Wang, Y., Kandpal, M., Zhao, G., Cardenas, H., Ji, Y., Chaparala, A., Tanner, E. J., Chen, J., Davuluri, R. V. & Matei, D., Aug 15 2020, In : Cancer Research. 80, 16, p. 3200-3214 15 p.

Research output: Contribution to journalArticle

Function, therapeutic potential and cell biology of BACE proteases: Current status and future prospects

Vassar, R., Kuhn, P. H., Haass, C., Kennedy, M. E., Rajendran, L., Wong, P. C. & Lichtenthaler, S. F., Jul 2014, In : Journal of neurochemistry. 130, 1, p. 4-28 25 p.

Research output: Contribution to journalReview article

214 Scopus citations

Functional Connectivity is Reduced in Early-stage Primary Progressive Aphasia When Atrophy is not Prominent

Bonakdarpour, B., Rogalski, E. J., Wang, A., Sridhar, J., Mesulam, M. M. & Hurley, R. S., May 1 2017, In : Alzheimer Disease and Associated Disorders. 31, 2, p. 101-106 6 p.

Research output: Contribution to journalArticle

8 Scopus citations

Gene expression profiling of isogenic cells with different TP53 gene dosage reveals numerous genes that are affected by TP53 dosage and identifies CSPG2 as a direct target of p53

Yoon, H., Liyanarachchi, S., Wright, F. A., Davuluri, R., Lockman, J. C., De la Chapelle, A. & Pellegata, N. S., Nov 26 2002, In : Proceedings of the National Academy of Sciences of the United States of America. 99, 24, p. 15632-15637 6 p.

Research output: Contribution to journalArticle

69 Scopus citations

Gene expression profiling of the human natural killer cell response to Fc receptor activation: Unique enhancement in the presence of interleukin-12

Campbell, A. R., Regan, K., Bhave, N., Pattanayak, A., Parihar, R., Stiff, A. R., Trikha, P., Scoville, S. D., Liyanarachchi, S., Kondadasula, S. V., Lele, O., Davuluri, R. V., Payne, P. R. O. & Carson, W. E., Oct 15 2015, In : BMC Medical Genomics. 8, 1, 66.

Research output: Contribution to journalArticle

8 Scopus citations

Genetic bases of epidermolysis bullosa simplex and epidermolytic hyperkeratosis

Fuchs, E., Coulombe, P., Cheng, J., Chan, Y. M., Hutton, E., Syder, A., Degenstein, L., Yu, Q. C., Letai, A. & Vassar, R., Jan 1 1994, In : Journal of Investigative Dermatology. 103, 5 SUPPL., p. S25-S30

Research output: Contribution to journalArticle

67 Scopus citations
26 Scopus citations

Genetic predisposition to papillary thyroid carcinoma: Involvement of FOXE1, TSHR, and a novel lincRNA Gene, PTCSC2

He, H., Li, W., Liyanarachchi, S., Jendrzejewski, J., Srinivas, M., Davuluri, R. V., Nagy, R. & De La Chapelle, A., Jan 1 2015, In : Journal of Clinical Endocrinology and Metabolism. 100, 1, p. E164-E172

Research output: Contribution to journalArticle

59 Scopus citations

Genetic predisposition to papillary thyroid carcinoma: involvement of FOXE1, TSHR, and a novel lincRNA gene, PTCSC2

He, H., Li, W., Liyanarachchi, S., Jendrzejewski, J., Srinivas, M., Davuluri, R. V., Nagy, R. & de la Chapelle, A., Jan 1 2015, In : The Journal of clinical endocrinology and metabolism. 100, 1, p. E164-E172

Research output: Contribution to journalArticle

Gene transfer of pro-IL-18 and IL-1β converting enzyme cDNA induces potent antitumor effects in L1210 cells

Zhang, B., Wu, K. F., Lin, Y. M., Ma, X. T., Rao, Q., Zheng, G. G., Cao, Z. Y., Li, G. & Song, Y. H., Apr 2004, In : Leukemia. 18, 4, p. 817-825 9 p.

Research output: Contribution to journalArticle

16 Scopus citations

Genome-wide analysis of alternative promoters of human genes using a custom promoter tiling array

Singer, G. A. C., Wu, J., Yan, P., Plass, C., Huang, T. H. M. & Davuluri, R. V., Jul 25 2008, In : BMC Genomics. 9, 349.

Research output: Contribution to journalArticle

32 Scopus citations

Genome-wide analysis of core promoter elements from conserved human and mouse orthologous pairs

Jin, V. X., Singer, G. A. C., Agosto-Pérez, F. J., Liyanarachchi, S. & Davuluri, R. V., 2006, In : BMC bioinformatics. 7, 114.

Research output: Contribution to journalArticle

52 Scopus citations

Genome-wide analysis of host-chromosome binding sites for Epstein-Barr Virus Nuclear Antigen 1 (EBNA1)

Lu, F., Wikramasinghe, P., Norseen, J., Tsai, K., Wang, P., Showe, L., Davuluri, R. V. & Lieberman, P. M., 2010, In : Virology Journal. 7, 262.

Research output: Contribution to journalArticle

54 Scopus citations

Genome-wide mapping of RNA pol-II promoter usage in mouse tissues by chiP-Seq

Pal, S., Gupta, R. & Davuluri, R. V., 2014, Cancer Genomics and Proteomics: Methods and Protocols. Humana Press Inc., p. 1-9 9 p. (Methods in Molecular Biology; vol. 1176).

Research output: Chapter in Book/Report/Conference proceedingChapter

Genome-wide mapping of RNA Pol-II promoter usage in mouse tissues by ChIP-seq

Pal, S., Gupta, R. & Davuluri, R. V., 2014, Cancer Genomics and Proteomics: Methods and Protocols. Humana Press Inc., p. 1-9 9 p. (Methods in Molecular Biology; vol. 1176).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Genome-wide mapping of RNA Pol-II promoter usage in mouse tissues by ChIP-seq

Sun, H., Wu, J., Wickramasinghe, P., Pal, S., Gupta, R., Bhattacharyya, A., Agosto-Perez, F. J., Showe, L. C., Huang, T. H. M. & Davuluri, R. V., 2011, In : Nucleic acids research. 39, 1, p. 190-201 12 p.

Research output: Contribution to journalArticle

37 Scopus citations

Genome-Wide Mapping of RNA Pol-II Promoter Usage in Mouse Tissues by ChIP-Seq

Sharmistha, P., Gupta, R. & Davuluri, R. V., 2014, Cancer Genomics and Proteomics Methods in Molecular Biology Volume 1176. Wajapeyee, N. (ed.). New York: Springer, p. 1-9

Research output: Chapter in Book/Report/Conference proceedingChapter

Genomic structure and alternative splicing of murine R2B receptor protein tyrosine phosphatases (PTPκ, μ, ρ and PCP-2) _apdat 2040211

Besco, J., Popesco, M. C., Davuluri, R. V., Frostholm, A. & Rotter, A., 2004, In : BMC Genomics. 5, 14.

Research output: Contribution to journalArticle

18 Scopus citations

Geography of follicle formation in the embryonic mouse ovary impacts activation pattern during the first wave of folliculogenesis

Cordeiro, M. H., Kim, S. Y., Ebbert, K., Duncan, F. E., Ramalho-Santos, J. & Woodruff, T. K., Oct 1 2015, In : Biology of reproduction. 93, 4, 88.

Research output: Contribution to journalArticle

9 Scopus citations