Medicine, Infectious Diseases Division

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2018

Brief report: Circulating markers of fibrosis are associated with immune reconstitution status in HIV-infected men

Tobolowsky, F. A., Wada, N., Martinez-Maza, O., Magpantay, L., Koletar, S. L., Palella, F. J., Brown, T. T. & Lake, J. E., Jan 2018, In : PloS one. 13, 1, e0191606.

Research output: Contribution to journalArticle

Cancer risk in HIV patients with incomplete viral suppression after initiation of antiretroviral therapy

AIDS Research (CFAR) Network of Integrated Clinical Systems (CNICS), Jun 2018, In : PloS one. 13, 6, e0197665.

Research output: Contribution to journalArticle

1 Scopus citations

Carotid artery atherosclerosis is associated with mortality in HIV-positive women and men

Hanna, D. B., Moon, J. Y., Haberlen, S. A., French, A. L., Palella, F. J., Gange, S. J., Witt, M. D., Kassaye, S., Lazar, J. M., Tien, P. C., Feinstein, M. J., Kingsley, L. A., Post, W. S., Kaplan, R. C., Hodis, H. N. & Anastos, K., Oct 23 2018, In : AIDS (London, England). 32, 16, p. 2393-2403 11 p.

Research output: Contribution to journalArticle

9 Scopus citations
Open Access
13 Scopus citations

Clinical characteristics of non-tuberculous mycobacterial pulmonary infections in Bamako, Mali

Kone, B., Sarro, Y. S., Maiga, M., Sanogo, M., Somboro, A. M., Diarra, B., Togo, A. C. G., Coulibaly, N., Dembele, B. P. P., Goita, D., Baya, B., Kone, A., Diabaté, S., Polis, M. A., Belson, M., Dao, S., Orsega, S., Achenbach, C. J., Murphy, R. L., Diallo, S. & 1 others, Siddiqui, S., Feb 1 2018, In : Epidemiology and Infection. 146, 3, p. 354-358 5 p.

Research output: Contribution to journalArticle

8 Scopus citations
9 Scopus citations

Comparative genomics analysis of Clostridium difficile epidemic strain DH/NAP11/106

Kociolek, L. K., Gerding, D. N., Hecht, D. W. & Ozer, E. A., Apr 2018, In : Microbes and Infection. 20, 4, p. 245-253 9 p.

Research output: Contribution to journalArticle

9 Scopus citations

Comprehensive innate immune profiling of chikungunya virus infection in pediatric cases

Michlmayr, D., Pak, T. R., Rahman, A. H., Amir, E. A. D., Kim, E. Y., Kim-Schulze, S., Suprun, M., Stewart, M. G., Thomas, G. P., Balmaseda, A., Wang, L., Zhu, J., Suaréz-Fariñas, M., Wolinsky, S. M., Kasarskis, A. & Harris, E., Aug 2018, In : Molecular Systems Biology. 14, 8, e7862.

Research output: Contribution to journalArticle

17 Scopus citations

Correlation between hospital-level antibiotic consumption and incident health care facility-onset Clostridium difficile infection

Crew, P. E., Rhodes, N. J., O'Donnell, J. N., Miglis, C., Gilbert, E. M., Zembower, T. R., Qi, C., Silkaitis, C., Sutton, S. H. & Scheetz, M. H., Mar 2018, In : American Journal of Infection Control. 46, 3, p. 270-275 6 p.

Research output: Contribution to journalArticle

3 Scopus citations

CRL4AMBRA1 targets Elongin C for ubiquitination and degradation to modulate CRL5 signaling

Chen, S. H., Jang, G. M., Hüttenhain, R., Gordon, D. E., Du, D., Newton, B. W., Johnson, J. R., Hiatt, J., Hultquist, J. F., Johnson, T. L., Liu, Y. L., Burton, L. A., Ye, J., Reichermeier, K. M., Stroud, R. M., Marson, A., Debnath, J., Gross, J. D. & Krogan, N. J., Sep 14 2018, In : EMBO Journal. 37, 18, e97508.

Research output: Contribution to journalArticle

2 Scopus citations

Cytomegalovirus infection in heart transplantation: A single center experience

Echenique, I. A., Angarone, M. P., Rich, J. D., Anderson, A. S. & Stosor, V., Aug 2018, In : Transplant Infectious Disease. 20, 4, e12896.

Research output: Contribution to journalArticle

2 Scopus citations

Deceased organ donor screening for human immunodeficiency virus, hepatitis B virus and hepatitis C virus: Discordant serology and nucleic acid testing results

Theodoropoulos, N., Nowicki, M. J., Chinchilla-Reyes, C., Dionne, S., Jaramillo, A., Mone, T., Hasz, R., Jendrisak, M. D., Ladner, D. P. & Ison, M. G., Feb 1 2018, In : Transplant Infectious Disease. 20, 1, e12821.

Research output: Contribution to journalArticle

6 Scopus citations

Differences by HIV serostatus in coronary artery disease severity and likelihood of percutaneous coronary intervention following stress testing

Feinstein, M. J., Poole, B., Engel Gonzalez, P., Pawlowski, A. E., Schneider, D., Provias, T. S., Palella, F. J., Achenbach, C. J. & Lloyd-Jones, D. M., Jun 1 2018, In : Journal of Nuclear Cardiology. 25, 3, p. 872-883 12 p.

Research output: Contribution to journalArticle

3 Scopus citations
7 Scopus citations

Discordant rapid HIV tests: lessons from a low-resource community

Adetunji, A. A., Kuti, M. A., Audu, R. A., Muyibi, S. A., Imhansoloeva, M., Mosuro, O. A., Solanke, E. A., Akpa, O. M., Irabor, A. E., Ladipo, M. M. A., Berzins, B., Robertson, K., Ogunniyi, A., Adewole, I. F. & Taiwo, B. O., Jan 2018, In : HIV Medicine. 19, 1, p. 72-76 5 p.

Research output: Contribution to journalArticle

1 Scopus citations

Disparities in HIV Viral Load Suppression by Race/Ethnicity among Men Who Have Sex with Men in the HIV Outpatient Study

Buchacz, K., Armon, C., Tedaldi, E., Palella, F. J., Novak, R. M., Ward, D., Hart, R., Durham, M. D. & Brooks, J. T., Apr 2018, In : AIDS research and human retroviruses. 34, 4, p. 357-364 8 p.

Research output: Contribution to journalArticle

2 Scopus citations

DNA methylation of telomere-related genes and cancer risk

Joyce, B. T., Zheng, Y., Nannini, D., Zhang, Z., Liu, L., Gao, T., Kocherginsky, M., Murphy, R., Yang, H., Achenbach, C. J., Roberts, L. R., Hoxha, M., Shen, J., Vokonas, P., Schwartz, J., Baccarelli, A. & Hou, L., Aug 2018, In : Cancer Prevention Research. 11, 8, p. 511-522 12 p.

Research output: Contribution to journalArticle

4 Scopus citations

Dolutegravir-induced hyperglycaemia in a patient living with HIV.

McLaughlin, M., Walsh, S. & Galvin, S., Jan 1 2018, In : J Antimicrob Chemother. 73, 1, p. 258-260 3 p.

Research output: Contribution to journalArticle

3 Scopus citations

Dolutegravir Plus Lamivudine Maintains Human Immunodeficiency Virus-1 Suppression Through Week 48 in a Pilot Randomized Trial

Taiwo, B. O., Marconi, V. C., Berzins, B., Moser, C. B., Nyaku, A. N., Fichtenbaum, C. J., Benson, C. A., Wilkin, T., Koletar, S. L., Colasanti, J., Acosta, E. P., Li, J. Z. & Sax, P. E., May 17 2018, In : Clinical Infectious Diseases. 66, 11, p. 1794-1797 4 p.

Research output: Contribution to journalArticle

43 Scopus citations

Efavirenz and lopinavir levels in HIV-infected women and their nursing infants, in Mali

Oumar, A. A., Bagayoko-Maiga, K., Bahachimi, A., Maiga, M., Cere, M. C., Diarra, Z., Chatelut, E., Sylla, M., Murphy, R. L., Dao, S. & Gandia, P., Sep 2018, In : Journal of Pharmacology and Experimental Therapeutics. 366, 3, p. 479-484 6 p.

Research output: Contribution to journalArticle

1 Scopus citations

Elevated HLA-A expression impairs HIV control through inhibition of NKG2A-expressing cells

Ramsuran, V., Naranbhai, V., Horowitz, A., Qi, Y., Martin, M. P., Yuki, Y., Gao, X., Walker-Sperling, V., Del Prete, G. Q., Schneider, D. K., Lifson, J. D., Fellay, J., Deeks, S. G., Martin, J. N., Goedert, J. J., Wolinsky, S. M., Michael, N. L., Kirk, G. D., Buchbinder, S., Haas, D. & 6 others, Ndung'u, T., Goulder, P., Parham, P., Walker, B. D., Carlson, J. M. & Carrington, M., Jan 5 2018, In : Science. 359, 6371, p. 86-90 5 p.

Research output: Contribution to journalArticle

42 Scopus citations

Environmental reservoirs for exoS+ and exoU+ strains of Pseudomonas aeruginosa

Rutherford, V., Yom, K., Ozer, E. A., Pura, O., Hughes, A., Murphy, K. R., Cudzilo, L., Mitchell, D. & Hauser, A. R., Aug 2018, In : Environmental Microbiology Reports. 10, 4, p. 485-492 8 p.

Research output: Contribution to journalArticle

5 Scopus citations

Fab-based inhibitors reveal ubiquitin independent functions for HIV Vif neutralization of APOBEC3 restriction factors

Binning, J. M., Smith, A. M., Hultquist, J. F., Craik, C. S., Caretta Cartozo, N., Campbell, M. G., Burton, L., La Greca, F., McGregor, M. J., Ta, H. M., Bartholomeeusen, K., Peterlin, B. M., Krogan, N. J., Sevillano, N., Cheng, Y. & Gross, J. D., Jan 2018, In : PLoS pathogens. 14, 1, e1006830.

Research output: Contribution to journalArticle

6 Scopus citations

Genomic Epidemiology Reconstructs the Introduction and Spread of Zika Virus in Central America and Mexico

Thézé, J., Li, T., du Plessis, L., Bouquet, J., Kraemer, M. U. G., Somasekar, S., Yu, G., de Cesare, M., Balmaseda, A., Kuan, G., Harris, E., Wu, C. H., Ansari, M. A., Bowden, R., Faria, N. R., Yagi, S., Messenger, S., Brooks, T., Stone, M., Bloch, E. M. & 9 others, Busch, M., Muñoz-Medina, J. E., González-Bonilla, C. R., Wolinsky, S., López, S., Arias, C. F., Bonsall, D., Chiu, C. Y. & Pybus, O. G., Jun 13 2018, In : Cell Host and Microbe. 23, 6, p. 855-864.e7

Research output: Contribution to journalArticle

25 Scopus citations
3 Scopus citations

Impact of antiretroviral therapy on the risk of herpes zoster among human immunodeficiency virus-infected individuals in Tanzania

Kawai, K., Hawkins, C. A., Hertzmark, E., Francis, J. M., Sando, D., Muya, A. N., Ulenga, N. & Fawzi, W. W., Jan 1 2018, In : American Journal of Tropical Medicine and Hygiene. 98, 2, p. 396-401 6 p.

Research output: Contribution to journalArticle

1 Scopus citations

Impact of electronic health record-based, pharmacist-driven valganciclovir dose optimization in solid organ transplant recipients

Hensler, D., Richardson, C. L., Brown, J., Tseng, C., Decamp, P. J., Yang, A., Pawlowski, A., Ho, B. & Ison, M. G., Apr 2018, In : Transplant Infectious Disease. 20, 2, e12849.

Research output: Contribution to journalArticle

6 Scopus citations

Impact of glycemic status on longitudinal cognitive performance in men with and without HIV infection

Yang, J., Jacobson, L. P., Becker, J. T., Levine, A., Martin, E. M., Munro, C. A., Palella, F. J., Lake, J. E., Sacktor, N. C. & Brown, T. T., Jan 1 2018, In : AIDS. 32, 13, p. 1849-1860 12 p.

Research output: Contribution to journalArticle

2 Scopus citations

Increased T cell trafficking as adjunct therapy for HIV-1

Fryer, H. R., Wolinsky, S. M. & McLean, A. R., Mar 2018, In : PLoS computational biology. 14, 3, e1006028.

Research output: Contribution to journalArticle

1 Scopus citations

Infectious Complications in Critically Ill Liver Failure Patients

Cheung, A., Tanna, S. D. & Ison, M. G., Jan 1 2018, In : Seminars in Respiratory and Critical Care Medicine. 39, 5, p. 578-587 10 p.

Research output: Contribution to journalArticle

Influenza virus infection causes global RNAPII termination defects

Zhao, N., Sebastiano, V., Moshkina, N., Mena, N., Hultquist, J., Jimenez-Morales, D., Ma, Y., Rialdi, A., Albrecht, R., Fenouil, R., Sánchez-Aparicio, M. T., Ayllon, J., Ravisankar, S., Haddad, B., Ho, J. S. Y., Low, D., Jin, J., Yurchenko, V., Prinjha, R. K., Tarakhovsky, A. & 13 others, Squatrito, M., Pinto, D., Allette, K., Byun, M., Smith, M. L., Sebra, R., Guccione, E., Tumpey, T., Krogan, N., Greenbaum, B., van Bakel, H., García-Sastre, A. & Marazzi, I., Sep 1 2018, In : Nature Structural and Molecular Biology. 25, 9, p. 885-893 9 p.

Research output: Contribution to journalArticle

7 Scopus citations

Insurance status and mortality among patients with AIDS

the Studies of the Ocular Complications of AIDS Research Group, Jan 2018, In : HIV Medicine. 19, 1, p. 7-17 11 p.

Research output: Contribution to journalArticle

1 Scopus citations

Killer cell immunoglobulin-like receptor 3DL1 variation modifies HLA-B*57 protection against HIV-1

Martin, M. P., Naranbhai, V., Shea, P. R., Qi, Y., Ramsuran, V., Vince, N., Gao, X., Thomas, R., Brumme, Z. L., Carlson, J. M., Wolinsky, S. M., Goedert, J. J., Walker, B. D., Segal, F. P., Deeks, S. G., Haas, D. W., Migueles, S. A., Connors, M., Michael, N., Fellay, J. & 12 others, Gostick, E., Llewellyn-Lacey, S., Price, D. A., Lafont, B. A., Pymm, P., Saunders, P. M., Widjaja, J., Wong, S. C., Vivian, J. P., Rossjohn, J., Brooks, A. G. & Carrington, M., May 1 2018, In : Journal of Clinical Investigation. 128, 5, p. 1903-1912 10 p.

Research output: Contribution to journalArticle

13 Scopus citations

Long-Term kidney function, proteinuria, and associated risks among HIV-infected and uninfected men

Palella, F. J., Li, X., Gupta, S. K., Estrella, M. M., Phair, J. P., Margolick, J. B., Detels, R., Kingsley, L. & Jacobson, L. P., Jun 19 2018, In : AIDS. 32, 10, p. 1247-1256 10 p.

Research output: Contribution to journalArticle

2 Scopus citations

Low T-cell subsets prior to development of virus-associated cancer in HIV-seronegative men who have sex with men

Dutta, A., Uno, H., Lorenz, D. R., Wolinsky, S. M. & Gabuzda, D., Nov 1 2018, In : Cancer Causes and Control. 29, 11, p. 1131-1142 12 p.

Research output: Contribution to journalArticle

1 Scopus citations

Low thigh muscle mass is associated with coronary artery stenosis among HIV-infected and HIV-uninfected men: The Multicenter AIDS Cohort Study (MACS)

Tibuakuu, M., Zhao, D., Saxena, A., Brown, T. T., Jacobson, L. P., Palella, F. J., Witt, M. D., Koletar, S. L., Margolick, J. B., Guallar, E., Korada, S. K. C., Budoff, M. J., Post, W. S. & Michos, E. D., Mar 1 2018, In : Journal of cardiovascular computed tomography. 12, 2, p. 131-138 8 p.

Research output: Contribution to journalArticle

4 Scopus citations

Lymphopenia is associated with late onset Pneumocystis jirovecii pneumonia in solid organ transplantation

Werbel, W. A., Ison, M. G., Angarone, M. P., Yang, A. & Stosor, V., Jun 2018, In : Transplant Infectious Disease. 20, 3, e12876.

Research output: Contribution to journalArticle

13 Scopus citations

Measuring the impact of varying denominator definitions on standardized antibiotic consumption rates: Implications for antimicrobial stewardship programmes

Avedissian, S. N., Scheetz, M. H., Zembower, T. R., Silkaitis, C., Maxwell, R., Jenkins, C., Postelnick, M. J., Sutton, S. H. & Rhodes, N. J., Jan 1 2018, In : Journal of Antimicrobial Chemotherapy. 73, 10, p. 2876-2882 7 p.

Research output: Contribution to journalArticle

1 Scopus citations

Metabolic health across the BMI spectrum in HIV-infected and HIV-uninfected men

Lake, J. E., Li, X., Palella, F. J., Erlandson, K. M., Wiley, D., Kingsley, L., Jacobson, L. P. & Brown, T. T., Jan 2 2018, In : AIDS. 32, 1, p. 49-57 9 p.

Research output: Contribution to journalArticle

4 Scopus citations

MiRNA-processing gene methylation and cancer risk

Joyce, B. T., Zheng, Y., Zhang, Z., Liu, L., Kocherginsky, M., Murphy, R., Achenbach, C. J., Musa, J., Wehbe, F., Just, A., Shen, J., Vokonas, P., Schwartz, J., Baccarelli, A. A. & Hou, L., May 2018, In : Cancer Epidemiology Biomarkers and Prevention. 27, 5, p. 550-557 8 p.

Research output: Contribution to journalArticle

4 Scopus citations

mTOR signaling mediates effects of common gamma-chain cytokines on T cell proliferation and exhaustion: implications for HIV-1 persistence and cure research

Taylor, H. E., Calantone, N. A. & D'Aquila, R. T., Nov 28 2018, In : AIDS (London, England). 32, 18, p. 2847-2851 5 p.

Research output: Contribution to journalArticle

1 Scopus citations

Multicenter AIDS Cohort Study Quantitative Coronary Plaque Progression Study: Rationale and design

Nakanishi, R., Post, W. S., Osawa, K., Jayawardena, E., Kim, M., Sheidaee, N., Nezarat, N., Rahmani, S., Kim, N., Hathiramani, N., Susarla, S., Palella, F., Witt, M., Blaha, M. J., Brown, T. T., Kingsley, L., Haberlen, S. A., Dailing, C. & Budoff, M. J., Jan 1 2018, In : Coronary Artery Disease. 29, 1, p. 23-29 7 p.

Research output: Contribution to journalArticle

3 Scopus citations

Multimorbidity among Persons Living with Human Immunodeficiency Virus in the United States

North American AIDS Cohort Collaboration on Research and Design (NA-ACCORD), Apr 3 2018, In : Clinical Infectious Diseases. 66, 8, p. 1230-1238 9 p.

Research output: Contribution to journalArticle

31 Scopus citations

Mycobacterium africanum (Lineage 6) shows slower sputum smear conversion on tuberculosis treatment than Mycobacterium tuberculosis (Lineage 4) in Bamako, Mali

Diarra, B., Kone, M., Togo, A. C. G., Sarro, Y. D. S., Cisse, A. B., Somboro, A., Degoga, B., Tolofoudie, M., Kone, B., Sanogo, M., Baya, B., Kodio, O., Maiga, M., Belson, M., Orsega, S., Krit, M., Dao, S., Maiga, I. I., Murphy, R. L., Rigouts, L. & 3 others, Doumbia, S., Diallo, S. & de Jong, B. C., Dec 2018, In : PloS one. 13, 12, e0208603.

Research output: Contribution to journalArticle

2 Scopus citations

Parenting desires among individuals living with HIV in the United States

Cohn, SE., Haddad, LB. & Steth, AN., Oct 2018, In : OFID. 5, 10

Research output: Contribution to journalArticle

Parenting Desires among Individuals Living with Human Immunodeficiency Virus in the United States

Cohn, S. E., Haddad, L. B., Sheth, A. N., Hayford, C., Chmiel, J. S., Janulis, P. F. & Schmandt, J., Oct 1 2018, In : Open Forum Infectious Diseases. 5, 10, ofy232.

Research output: Contribution to journalArticle

2 Scopus citations

Promoter methylation of PGC1A and PGC1B predicts cancer incidence in a veteran cohort

Kresovich, J. K., Joyce, B. T., Gao, T., Zheng, Y., Zhang, Z., Achenbach, C. J., Murphy, R. L., Just, A. C., Shen, J., Yang, H., Vokonas, P., Schwartz, J., Baccarelli, A. A. & Hou, L., Jun 2018, In : Epigenomics. 10, 6, p. 733-743 11 p.

Research output: Contribution to journalArticle

4 Scopus citations

Protein Interaction Mapping Identifies RBBP6 as a Negative Regulator of Ebola Virus Replication

Batra, J., Hultquist, J. F., Liu, D., Shtanko, O., Von Dollen, J., Satkamp, L., Jang, G. M., Luthra, P., Schwarz, T. M., Small, G. I., Arnett, E., Anantpadma, M., Reyes, A., Leung, D. W., Kaake, R., Haas, P., Schmidt, C. B., Schlesinger, L. S., LaCount, D. J., Davey, R. A. & 3 others, Amarasinghe, G. K., Basler, C. F. & Krogan, N. J., Dec 13 2018, In : Cell. 175, 7, p. 1917-1930.e13

Research output: Contribution to journalArticle

26 Scopus citations
3 Scopus citations