Medicine, Pulmonary Division

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Review article
2020

ALS: Management Problems

Brent, J. R., Franz, C. K., Coleman III, J. M. & Ajroud-Driss, S., Jan 1 2020, (Accepted/In press) In : Neurologic clinics.

Research output: Contribution to journalReview article

Cellular adaptation to hypoxia through hypoxia inducible factors and beyond

Lee, P., Chandel, N. S. & Simon, M. C., May 1 2020, In : Nature Reviews Molecular Cell Biology. 21, 5, p. 268-283 16 p.

Research output: Contribution to journalReview article

5 Scopus citations

CoRESTed development of regulatory T cells

Morales-Nebreda, L., Helmin, K. A. & Singer, B. D., Apr 1 2020, In : Journal of Clinical Investigation. 130, 4, p. 1618-1621 4 p.

Research output: Contribution to journalReview article

Mitochondrial TCA cycle metabolites control physiology and disease

Martínez-Reyes, I. & Chandel, N. S., Dec 1 2020, In : Nature communications. 11, 1, 102.

Research output: Contribution to journalReview article

Open Access
19 Scopus citations

The socrates project for difficult diagnosis at northwestern medicine

Singer, B. D., Goodwin, A. M., Patel, A. A. & Vaughan, D. E., Feb 2020, In : Journal of hospital medicine. 15, 2, p. 116-118 3 p.

Research output: Contribution to journalReview article

Open Access
1 Scopus citations

Tratamiento dirigido al complejo de ensamblaje de cadenas lineales de ubiquitina para modular la respuesta del huésped y mejorar el daño pulmonar inducido por el virus de la gripe A

Translated title of the contribution: Targeting the Linear Ubiquitin Assembly Complex to Modulate the Host Response and Improve Influenza A Virus Induced Lung InjuryBrazee, P. L. & Sznajder, J. I., Jan 1 2020, (Accepted/In press) In : Archivos de Bronconeumologia.

Research output: Contribution to journalReview article

Open Access
2019

Acute exacerbation of interstitial lung disease after procedures

Amundson, W. H., Racila, E., Allen, T., Dincer, H. E., Tomic, R., Bhargava, M., Perlman, D. M. & Kim, H. J., Apr 2019, In : Respiratory Medicine. 150, p. 30-37 8 p.

Research output: Contribution to journalReview article

2 Scopus citations

A practical guide to the measurement and analysis of DNA methylation

Singer, B. D., Oct 1 2019, In : American journal of respiratory cell and molecular biology. 61, 4, p. 417-428 12 p.

Research output: Contribution to journalReview article

3 Scopus citations

Challenges in severe community-acquired pneumonia: a point-of-view review

Torres, A., Chalmers, J. D., Dela Cruz, C. S., Dominedò, C., Kollef, M., Martin-Loeches, I., Niederman, M. & Wunderink, R. G., Feb 27 2019, In : Intensive Care Medicine. 45, 2, p. 159-171 13 p.

Research output: Contribution to journalReview article

7 Scopus citations

Clinical relevance of lung-restricted antibodies in lung transplantation

Akbarpour, M., Wu, Q., Liu, X., Sun, H., Lecuona, E., Tomic, R., Bhorade, S., Mohanakumar, T. & Bharat, A., Aug 2019, In : Human Immunology. 80, 8, p. 595-601 7 p.

Research output: Contribution to journalReview article

1 Scopus citations

DNA methylation as a transcriptional regulator of the immune system

Morales-Nebreda, L., McLafferty, F. S. & Singer, B. D., Feb 2019, In : Translational Research. 204, p. 1-18 18 p.

Research output: Contribution to journalReview article

20 Scopus citations

Immunometabolism of pro-repair cells

Singer, B. D. & Chandel, N. S., Jan 1 2019, In : Journal of Clinical Investigation. 129, 7, p. 2597-2607 11 p.

Research output: Contribution to journalReview article

6 Scopus citations

Introducing the new COPD pocket consultant guide app: Can a digital approach improve care? A statement of the COPD foundation

Thomashow, B., Crapo, J. D., Bradley Drummond, M., Han, M. L. K., Kalhan, R., Malanga, E., Malanga, V., Mannino, D. M., Rennard, S., Sciurba, F. C., Willard, K. S., Wise, R. & Yawn, B., Jan 1 2019, In : Chronic Obstructive Pulmonary Diseases. 6, 3, p. 210-220 11 p.

Research output: Contribution to journalReview article

Macrophages as a Source and Recipient of Wnt Signals

Malsin, E. S., Kim, S., Lam, A. P. & Gottardi, C. J., Jan 1 2019, In : Frontiers in immunology. 10, 1 p.

Research output: Contribution to journalReview article

Open Access
3 Scopus citations

Noninvasive ventilation in chronic obstructive pulmonary disease

Coleman III, J. M., Wolfe, L. F. & Kalhan, R., Jan 1 2019, In : Annals of the American Thoracic Society. 16, 9, p. 1091-1098 8 p.

Research output: Contribution to journalReview article

3 Scopus citations

Principles and Practice of Antibiotic Stewardship in the ICU

Pickens, C. I. & Wunderink, R. G., Jul 2019, In : CHEST. 156, 1, p. 163-171 9 p.

Research output: Contribution to journalReview article

4 Scopus citations

The human lung cell atlas: A high-resolution reference map of the human lung in health and disease

Schiller, H. B., Montoro, D. T., Simon, L. M., Rawlins, E. L., Meyer, K. B., Strunz, M., Vieira Braga, F. A., Timens, W., Koppelman, G. H., Budinger, G. R. S., Burgess, J. K., Waghray, A., Van Den Berge, M., Theis, F. J., Regev, A., Kaminski, N., Rajagopal, J., Teichmann, S. A., Misharin, A. V. & Nawijn, M. C., Jan 1 2019, In : American journal of respiratory cell and molecular biology. 61, 1, p. 31-41 11 p.

Research output: Contribution to journalReview article

12 Scopus citations

There is no smoke without mitochondria

Han, S. H. & Chandel, N. S., May 1 2019, In : American journal of respiratory cell and molecular biology. 60, 5, p. 489-491 3 p.

Research output: Contribution to journalReview article

Open Access

The role of macrophages in the resolution of inflammation

Watanabe, S., Alexander, M., Misharin, A. V. & Budinger, G. R. S., Jan 1 2019, In : Journal of Clinical Investigation. 129, 7, p. 2619-2628 10 p.

Research output: Contribution to journalReview article

15 Scopus citations

Use and Meaning of “Goals of Care” in the Healthcare Literature: a Systematic Review and Qualitative Discourse Analysis

Secunda, K., Wirpsa, M. J., Neely, K. J., Szmuilowicz, E., Wood, G. J., Panozzo, E., McGrath, J., Levenson, A., Peterson, J., Gordon, E. J. & Kruser, J. M., Jan 1 2019, (Accepted/In press) In : Journal of general internal medicine.

Research output: Contribution to journalReview article

2018

A beginner’s guide to analysis of RNA sequencing data

Koch, C. M., Chiu, S. F., Akbarpour, M., Bharat, A., Ridge, K. M., Bartom, E. T. & Winter, D. R., Aug 2018, In : American journal of respiratory cell and molecular biology. 59, 2, p. 145-157 13 p.

Research output: Contribution to journalReview article

7 Scopus citations

Challenges in pulmonary hypertension: Controversies in treating the tip of the iceberg a joint national institutes of health clinical center and pulmonary hypertension association symposium report

Elinoff, J. M., Agarwal, R., Barnett, C. F., Benza, R. L., Cuttica, M. J., Gharib, A. M., Gray, M. P., Hassoun, P. M., Hemnes, A. R., Humbert, M., Kolb, T. M., Lahm, T., Leopold, J. A., Mathai, S. C., McLaughlin, V. V., Preston, I. R., Rosenzweig, E. B., Shlobin, O. A., Steen, V. D., Zamanian, R. T. & 1 others, Solomon, M. A., Jul 15 2018, In : American journal of respiratory and critical care medicine. 198, 2, p. 166-174 9 p.

Research output: Contribution to journalReview article

9 Scopus citations

Defining impaired respiratory health a paradigm shift for pulmonary medicine

Reyfman, P. A., Washko, G. R., Dransfield, M. T., Spira, A., Han, M. L. K. & Kalhan, R., Aug 15 2018, In : American journal of respiratory and critical care medicine. 198, 4, p. 440-446 7 p.

Research output: Contribution to journalReview article

7 Scopus citations

Guidelines to Manage Community-Acquired Pneumonia

Wunderink, R. G., Dec 2018, In : Clinics in Chest Medicine. 39, 4, p. 723-731 9 p.

Research output: Contribution to journalReview article

1 Scopus citations

Initiation of Noninvasive Ventilation for Sleep Related Hypoventilation Disorders: Advanced Modes and Devices

Selim, B. J., Wolfe, L. F., Coleman III, J. M. & Dewan, N. A., Jan 1 2018, In : CHEST. 153, 1, p. 251-265 15 p.

Research output: Contribution to journalReview article

8 Scopus citations

Lung transplantation in scleroderma: Recent advances and lessons

Jablonski, R. P., Dematte, J. & Bhorade, S. M., Nov 1 2018, In : Current opinion in rheumatology. 30, 6, p. 562-569 8 p.

Research output: Contribution to journalReview article

6 Scopus citations

MERS, SARS and other coronaviruses as causes of pneumonia

Yin, Y. & Wunderink, R. G., Feb 1 2018, In : Respirology. 23, 2, p. 130-137 8 p.

Research output: Contribution to journalReview article

130 Scopus citations

Molecular mechanisms of cell death: Recommendations of the Nomenclature Committee on Cell Death 2018

Galluzzi, L., Vitale, I., Aaronson, S. A., Abrams, J. M., Adam, D., Agostinis, P., Alnemri, E. S., Altucci, L., Amelio, I., Andrews, D. W., Annicchiarico-Petruzzelli, M., Antonov, A. V., Arama, E., Baehrecke, E. H., Barlev, N. A., Bazan, N. G., Bernassola, F., Bertrand, M. J. M., Bianchi, K., Blagosklonny, M. V. & 149 others, Blomgren, K., Borner, C., Boya, P., Brenner, C., Campanella, M., Candi, E., Carmona-Gutierrez, D., Cecconi, F., Chan, F. K. M., Chandel, N. S., Cheng, E. H., Chipuk, J. E., Cidlowski, J. A., Ciechanover, A., Cohen, G. M., Conrad, M., Cubillos-Ruiz, J. R., Czabotar, P. E., D'Angiolella, V., Dawson, T. M., Dawson, V. L., De Laurenzi, V., De Maria, R., Debatin, K. M., Deberardinis, R. J., Deshmukh, M., Di Daniele, N., Di Virgilio, F., Dixit, V. M., Dixon, S. J., Duckett, C. S., Dynlacht, B. D., El-Deiry, W. S., Elrod, J. W., Fimia, G. M., Fulda, S., García-Sáez, A. J., Garg, A. D., Garrido, C., Gavathiotis, E., Golstein, P., Gottlieb, E., Green, D. R., Greene, L. A., Gronemeyer, H., Gross, A., Hajnoczky, G., Hardwick, J. M., Harris, I. S., Hengartner, M. O., Hetz, C., Ichijo, H., Jäättelä, M., Joseph, B., Jost, P. J., Juin, P. P., Kaiser, W. J., Karin, M., Kaufmann, T., Kepp, O., Kimchi, A., Kitsis, R. N., Klionsky, D. J., Knight, R. A., Kumar, S., Lee, S. W., Lemasters, J. J., Levine, B., Linkermann, A., Lipton, S. A., Lockshin, R. A., López-Otín, C., Lowe, S. W., Luedde, T., Lugli, E., MacFarlane, M., Madeo, F., Malewicz, M., Malorni, W., Manic, G., Marine, J. C., Martin, S. J., Martinou, J. C., Medema, J. P., Mehlen, P., Meier, P., Melino, S., Miao, E. A., Molkentin, J. D., Moll, U. M., Muñoz-Pinedo, C., Nagata, S., Nuñez, G., Oberst, A., Oren, M., Overholtzer, M., Pagano, M., Panaretakis, T., Pasparakis, M., Penninger, J. M., Pereira, D. M., Pervaiz, S., Peter, M. E., Piacentini, M., Pinton, P., Prehn, J. H. M., Puthalakath, H., Rabinovich, G. A., Rehm, M., Rizzuto, R., Rodrigues, C. M. P., Rubinsztein, D. C., Rudel, T., Ryan, K. M., Sayan, E., Scorrano, L., Shao, F., Shi, Y., Silke, J., Simon, H. U., Sistigu, A., Stockwell, B. R., Strasser, A., Szabadkai, G., Tait, S. W. G., Tang, D., Tavernarakis, N., Thorburn, A., Tsujimoto, Y., Turk, B., Vanden Berghe, T., Vandenabeele, P., Vander Heiden, M. G., Villunger, A., Virgin, H. W., Vousden, K. H., Vucic, D., Wagner, E. F., Walczak, H., Wallach, D., Wang, Y., Wells, J. A., Wood, W., Yuan, J., Zakeri, Z., Zhivotovsky, B., Zitvogel, L., Melino, G. & Kroemer, G., Mar 1 2018, In : Cell Death and Differentiation. 25, 3, p. 486-541 56 p.

Research output: Contribution to journalReview article

728 Scopus citations

Patients’ perceptions and patient-reported outcomes in progressive-fibrosing interstitial lung diseases

Swigris, J. J., Brown, K. K., Abdulqawi, R., Buch, K., Dilling, D. F., Koschel, D., Thavarajah, K., Tomic, R. & Inoue, Y., Jan 1 2018, In : European Respiratory Review. 27, 150, 180075.

Research output: Contribution to journalReview article

5 Scopus citations

Reducing Readmissions in Patients With Both Heart Failure and COPD

Kalhan, R. & Mutharasan, R. K., Nov 2018, In : CHEST. 154, 5, p. 1230-1238 9 p.

Research output: Contribution to journalReview article

3 Scopus citations

Regulation of redox balance in cancer and T cells

Kong, H. & Chandel, N. S., May 18 2018, In : Journal of Biological Chemistry. 293, 20, p. 7499-7507 9 p.

Research output: Contribution to journalReview article

29 Scopus citations

Resistance Trends and Treatment Options in Gram-Negative Ventilator-Associated Pneumonia

Rhodes, N. J., Cruce, C. E., O’Donnell, J. N., Wunderink, R. G. & Hauser, A. R., Feb 1 2018, In : Current Infectious Disease Reports. 20, 2, 3.

Research output: Contribution to journalReview article

9 Scopus citations

Secondary pulmonary arterial hypertension: to treat or not to treat?

Tomic, R. & Hertz, M. I., Jun 1 2018, In : Current opinion in organ transplantation. 23, 3, p. 324-329 6 p.

Research output: Contribution to journalReview article

1 Scopus citations

Shaping eosinophil identity in the tissue contexts of development, homeostasis, and disease

Abdala-Valencia, H., Coden, M. E., Chiarella, S. E., Jacobsen, E. A., Bochner, B. S., Lee, J. J. & Berdnikovs, S., Jul 2018, In : Journal of Leukocyte Biology. 104, 1, p. 95-108 14 p.

Research output: Contribution to journalReview article

25 Scopus citations

Sleep disorders in traumatic brain injury

Wolfe, L. F., Sahni, A. S. & Attarian, H., Jan 1 2018, In : NeuroRehabilitation. 43, 3, p. 257-266 10 p.

Research output: Contribution to journalReview article

2 Scopus citations

Testing for Respiratory Viruses in Adults With Severe Lower Respiratory Infection

Walter, J. M. & Wunderink, R. G., Nov 2018, In : CHEST. 154, 5, p. 1213-1222 10 p.

Research output: Contribution to journalReview article

5 Scopus citations

The antiviral effects of na,K-ATPase inhibition: A minireview

Amarelle, L. & Lecuona, E., Aug 2018, In : International journal of molecular sciences. 19, 8, 2154.

Research output: Contribution to journalReview article

6 Scopus citations

The Antiviral Effects of Na,K-ATPase Inhibition: A Minireview

Amarelle, L. & Lecuona, E., Jul 24 2018, In : International journal of molecular sciences. 19, 8

Research output: Contribution to journalReview article

The immune landscape of non-small-cell lung cancer utility of cytologic and histologic samples obtained through minimally invasive pulmonary procedures

Beattie, J., Yarmus, L., Wahidi, M., Rivera, M. P., Gilbert, C., Maldonado, F., Czarnecka, K., Argento, A., Chen, A., Herth, F. & Sterman, D. H., Jul 1 2018, In : American journal of respiratory and critical care medicine. 198, 1, p. 24-38 15 p.

Research output: Contribution to journalReview article

4 Scopus citations

The mitochondria in lung fibrosis: friend or foe?

Malsin, E. S. & Kamp, D. W., Dec 2018, In : Translational Research. 202, p. 1-23 23 p.

Research output: Contribution to journalReview article

4 Scopus citations

Ubiquitin-proteasome signaling in lung injury

Magnani, N. D., Dada, L. A. & Sznajder, J. I., Aug 2018, In : Translational Research. 198, p. 29-39 11 p.

Research output: Contribution to journalReview article

3 Scopus citations

WHO/ILO work-related burden of disease and injury: Protocol for systematic reviews of occupational exposure to dusts and/or fibres and of the effect of occupational exposure to dusts and/or fibres on pneumoconiosis

Mandrioli, D., Schlünssen, V., Ádám, B., Cohen, R. A., Colosio, C., Chen, W., Fischer, A., Godderis, L., Göen, T., Ivanov, I. D., Leppink, N., Mandic-Rajcevic, S., Masci, F., Nemery, B., Pega, F., Prüss-Üstün, A., Sgargi, D., Ujita, Y., van der Mierden, S., Zungu, M. & 1 others, Scheepers, P. T. J., Oct 2018, In : Environment International. 119, p. 174-185 12 p.

Research output: Contribution to journalReview article

28 Scopus citations
2017

A checklist is associated with increased quality of reporting preclinical biomedical research: A systematic review

Han, S. H., Olonisakin, T. F., Pribis, J. P., Zupetic, J., Yoon, J. H., Holleran, K. M., Jeong, K., Shaikh, N., Rubio, D. M. & Lee, J. S., Sep 2017, In : PloS one. 12, 9, e0183591.

Research output: Contribution to journalReview article

Open Access
27 Scopus citations

An official American thoracic society systematic review: The effect of nighttime intensivist staffing on mortality and length of stay among intensive care unit patients

Kerlin, M. P., Adhikari, N. K. J., Rose, L., Wilcox, M. E., Bellamy, C. J., Costa, D. K., Gershengorn, H. B., Halpern, S. D., Kahn, J. M., Lane-Fall, M. B., Wallace, D. J., Weiss, C. H., Wunsch, H. & Cooke, C. R., Feb 1 2017, In : American journal of respiratory and critical care medicine. 195, 3, p. 383-393 11 p.

Research output: Contribution to journalReview article

30 Scopus citations

ATS Core Curriculum 2017: Part III. Adult Critical care medicine series editor: Jason T. Poston Part III Editors: Jakob I. McSparron, Margaret M. Hayes, and Andrew M. Luks

McSparron, J. I., Hayes, M. M., Poston, J. T., Seaburg, L. A., Morris, A. E., Antkowiak, M., Farkas, J., Athale, J., Stephens, R. S., Dodd, K. W., Prekker, M. E., Hountras, P., Cuttica, M. J., Soffler, M., Hibbert, K. A., Leclair, T., Clouser, R. & Luks, A. M., Aug 2017, In : Annals of the American Thoracic Society. 14, p. S182-S195

Research output: Contribution to journalReview article

ATS Core Curriculum 2017: Part I. Adult sleep medicine

Jamil, S. M., Conwell, W. D., Poston, J. T., Patel, S., Billings, M., Boland, E., Gehrman, P., Chang, M., Martin, J. L., Khadadah, S., Kaminska, M., Sharma, R., Wolfe, L., Yafawi, J. Z. D., Hammond, T., De Cruz, S., Balachandran, J. & Wang, T., Aug 2017, In : Annals of the American Thoracic Society. 14, p. S150-S164

Research output: Contribution to journalReview article

1 Scopus citations

Cardiomyocytes of the heart and pulmonary veins: Novel contributors to asthma?

Folmsbee, S. S. & Gottardi, C. J., Nov 2017, In : American journal of respiratory cell and molecular biology. 57, 5, p. 512-518 7 p.

Research output: Contribution to journalReview article

3 Scopus citations

Effects of hypercapnia on the lung

Shigemura, M., Lecuona, E. & Sznajder, J. I., Apr 15 2017, In : Journal of Physiology. 595, 8, p. 2431-2437 7 p.

Research output: Contribution to journalReview article

8 Scopus citations

International ERS/ESICM/ESCMID/ALAT guidelines for the management of hospital-acquired pneumonia and ventilator-associated pneumonia

Torres, A., Niederman, M. S., Chastre, J., Ewig, S., Fernandez-Vandellos, P., Hanberger, H., Kollef, M., Bassi, G. L., Luna, C. M., Martin-Loeches, I., Paiva, J. A., Read, R. C., Rigau, D., Timsit, J. F., Welte, T. & Wunderink, R., Sep 1 2017, In : European Respiratory Journal. 50, 3, 00582.

Research output: Contribution to journalReview article

167 Scopus citations

Leukotrienes and sex: Strange bedfellows?

Smith, L. J., Aug 1 2017, In : Journal of Clinical Investigation. 127, 8, p. 2895-2896 2 p.

Research output: Contribution to journalReview article

1 Scopus citations