Research Output

Filter
Chapter
2020

Challenging Proteostasis: Role of the Chaperone Network to Control Aggregation-Prone Proteins in Human Disease

Sinnige, T., Yu, A. & Morimoto, R. I., Jan 1 2020, Advances in Experimental Medicine and Biology. Springer, p. 53-68 16 p. (Advances in Experimental Medicine and Biology; vol. 1243).

Research output: Chapter in Book/Report/Conference proceedingChapter

2019

In vitro and in vivo assays for mitochondrial fission and fusion

Hoppins, S., Lackner, L. L., Lee, J. E. & Mears, J. A., Jan 1 2019, (Accepted/In press) Methods in Cell Biology. Academic Press Inc, (Methods in Cell Biology).

Research output: Chapter in Book/Report/Conference proceedingChapter

The caenorhabditis genetics center (CGC) and the caenorhabditis elegans natural diversity resource

Daul, A. L., Andersen, E. C. & Rougvie, A. E., Jan 1 2019, The Biological Resources of Model Organisms. CRC Press, p. 69-94 26 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2018

DNA mechanics and topology

Brahmachari, S. & Marko, J. F., Jan 1 2018, Advances in Experimental Medicine and Biology. Springer New York LLC, p. 11-39 29 p. (Advances in Experimental Medicine and Biology; vol. 1092).

Research output: Chapter in Book/Report/Conference proceedingChapter

Nuclear pore complex in genome organization and gene expression in yeast

Randise-Hinchliff, C. & Brickner, J. H., Jan 1 2018, Nuclear Pore Complexes in Genome Organization, Function and Maintenance. Springer International Publishing, p. 87-109 23 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Recent Advances in the Genetic Manipulation of Methylosinus trichosporium OB3b

Ro, S. Y. & Rosenzweig, A. C., Jan 1 2018, Methods in Enzymology. Academic Press Inc, p. 335-349 15 p. (Methods in Enzymology; vol. 605).

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations

Single-molecule magnetic tweezer analysis of topoisomerases

Gunn, K. H., Marko, J. F. & Mondragón, A., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 139-152 14 p. (Methods in Molecular Biology; vol. 1703).

Research output: Chapter in Book/Report/Conference proceedingChapter

Spermatids

Zirkin, B. R. & Goldberg, E., Jan 1 2018, Encyclopedia of Reproduction. Elsevier, p. 42-46 5 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Spermatogenesis: Overview

Goldberg, E. & Zirkin, B. R., Jan 1 2018, Encyclopedia of Reproduction. Elsevier, p. 13-18 6 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2017

A recessive genetic screen for components of the RNA interference pathway performed in mouse embryonic stem cells

Trombly, M. I. & Wang, X., Jan 1 2017, Methods in Molecular Biology. Humana Press Inc, p. 111-129 19 p. (Methods in Molecular Biology; vol. 1622).

Research output: Chapter in Book/Report/Conference proceedingChapter

Bioinformatics analysis of top-down mass spectrometry data with proSight lite

Dehart, C. J., Fellers, R. T., Fornelli, L., Kelleher, N. L. & Thomas, P. M., Jan 1 2017, Methods in Molecular Biology. Humana Press Inc, p. 381-394 14 p. (Methods in Molecular Biology; vol. 1558).

Research output: Chapter in Book/Report/Conference proceedingChapter

10 Scopus citations
2016

A method for label-free, differential top-down proteomics

Ntai, I., Toby, T. K., Leduc, R. D. & Kelleher, N. L., Feb 1 2016, Methods in Molecular Biology. Humana Press Inc, p. 121-133 13 p. (Methods in Molecular Biology; vol. 1410).

Research output: Chapter in Book/Report/Conference proceedingChapter

19 Scopus citations

Protein aggregation and degradation

Morimoto, R. I. & Kirstein, J., 2016, Molecular and Cellular Biology of Aging. Vigh, J., Campisi, J. & Lithgow, G. (eds.). Gerontological Society of America

Research output: Chapter in Book/Report/Conference proceedingChapter

Screening for expressed nonribosomal peptide synthetases and polyketide synthases using LC-MS/MS-based proteomics

Chen, Y., McClure, R. A. & Kelleher, N. L., Feb 1 2016, Methods in Molecular Biology. Humana Press Inc., p. 135-147 13 p. (Methods in Molecular Biology; vol. 1401).

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations
2014

Approaches to studying subnuclear organization and gene-nuclear pore interactions

Egecioglu, D. E., D'Urso, A., Brickner, D. G., Light, W. H. & Brickner, J. H., 2014, Methods in Cell Biology. Academic Press Inc, p. 463-485 23 p. (Methods in Cell Biology; vol. 122).

Research output: Chapter in Book/Report/Conference proceedingChapter

9 Scopus citations

Gonadotropin Signaling in the Ovary

Hunzicker-Dunn, M. & Mayo, K. E., Dec 23 2014, Knobil and Neill's Physiology of Reproduction: Two-Volume Set. Elsevier Inc, Vol. 1. p. 895-945 51 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

20 Scopus citations

Protocols for Structural and Functional Analysis of Particulate Methane Monooxygenase from Methylocystis Species Strain Rockwell (ATCC 49242)

Sirajuddin, S. & Rosenzweig, A. C., 2014, Hydrocarbon and Lipid Microbiology Protocols: Biochemical Methods. McGenity, T. J., Timmis, K. N. & Nogales, B. (eds.). Springer Berlin Heidelberg, p. 149-160 12 p. (Springer Protocols Handbooks).

Research output: Chapter in Book/Report/Conference proceedingChapter

2013

Evaluation of electron crystallographic data from images of two-dimensional crystals

Unger, V. M., Jan 1 2013, Electron Crystallography of Soluble and Membrane Proteins: Methods and Protocols. Humana Press Inc, p. 211-227 17 p. (Methods in Molecular Biology; vol. 955).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Meiotic Product

Ruvinsky, I., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. Elsevier Inc, p. 344 1 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Mononegavirales

Lamb, R. A., May 21 2013, Fields Virology: Sixth Edition. Wolters Kluwer Health Adis (ESP), Vol. 1.

Research output: Chapter in Book/Report/Conference proceedingChapter

8 Scopus citations

Paramyxoviridae

Lamb, R. A. & Parks, G. D., May 21 2013, Fields Virology: Sixth Edition. Wolters Kluwer Health Adis (ESP), Vol. 1.

Research output: Chapter in Book/Report/Conference proceedingChapter

93 Scopus citations

Paramyxoviridae: the viruses and their replication

Lamb, R. A. & Parks, G. D., 2013, Fields Virology: Sixth Edition. Fields, B. N., Knipe, D. M. & Howley, P. M. (eds.). Lippincott, Williams, and Wilkins, Vol. 1. p. 957-995 39 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Proton channels of influenza A and B viruses

Ma, C., Pinto, L. H. & Lamb, R. A., 2013, Textbook of Influenza: 2nd Edition. Webster, R. G., Monto, A. S., Braciale, T. J. & Lamb, R. A. (eds.). John Wiley & Sons, Ltd., p. 101-113 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Segregation

Ruvinsky, I., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. Elsevier Inc, p. 353 1 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Structural Biology of Copper Transport

Flores, A. G., Pope, C. R. & Unger, V. M., 2013, Metals in Cells. Culotta, V. & Scott, R. A. (eds.). John Wiley & Sons, p. 175-182 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2012

Activation and inhibition of JAK-STAT signal transduction by RNA viruses

Horvath, C. M., Nov 1 2012, Jak-Stat Signaling: From Basics to Disease. Springer-Verlag Wien, Vol. 9783709108918. p. 371-385 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Biological Robustness and the Role of MicroRNAs. A Network Perspective

Peláez, N. & Carthew, R. W., Jan 1 2012, Current Topics in Developmental Biology. Academic Press Inc, p. 237-255 19 p. (Current Topics in Developmental Biology; vol. 99).

Research output: Chapter in Book/Report/Conference proceedingChapter

58 Scopus citations

Structure and Function of Copper Uptake Transporters

Pope, C. R., Flores, A. G., Kaplan, J. H. & Unger, V. M., Jan 1 2012, Current Topics in Membranes. Academic Press Inc., p. 97-112 16 p. (Current Topics in Membranes; vol. 69).

Research output: Chapter in Book/Report/Conference proceedingChapter

20 Scopus citations

The regulation and function of the heat shock response

Guisbert, E. & Morimoto, R. I., 2012, Protein Quality Control in Neurodegenerative Diseases. Morimoto, R. & Christen, Y. (eds.). Springer Berlin Heidelberg, p. 1-18 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Toward a Molecular Understanding of Metal Transport by P 1B -Type ATPases

Rosenzweig, A. C. & Argüello, J. M., 2012, Current Topics in Membranes. Academic Press Inc, p. 113-136 24 p. (Current Topics in Membranes; vol. 69).

Research output: Chapter in Book/Report/Conference proceedingChapter

36 Scopus citations
2011

Metal reconstitution of particulate methane Monooxygenase and heterologous expression of the pmoB subunit

Smith, S. M., Balasubramanian, R. & Rosenzweig, A. C., 2011, Methods in Enzymology. Academic Press Inc, p. 195-210 16 p. (Methods in Enzymology; vol. 495).

Research output: Chapter in Book/Report/Conference proceedingChapter

18 Scopus citations

The Mitotic Chromosome: Structure and Mechanics

Marko, J. F., Nov 14 2011, Genome Organization and Function in the Cell Nucleus. Wiley-VCH, p. 449-485 37 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

5 Scopus citations
2010

Approaches for natural product detection and structural elucidation using mass spectrometry with high mass accuracy

Ntai, I. & Kelleher, N. L., Jan 1 2010, Methodologies for Metabolomics: Experimental Strategies and Techniques. Cambridge University Press, p. 174-184 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

A recessive genetic screen for components of the RNA interference pathway in mouse embryonic stem cells

Trombly, M. I. & Wang, X., Dec 1 2010, RNAi and MicroRNA-Mediated Gene Regulation in Stem Cells: Methods, Protocols, and Applications. Zhang, B. & Stellwag, E. (eds.). p. 45-63 19 p. (Methods in Molecular Biology; vol. 650).

Research output: Chapter in Book/Report/Conference proceedingChapter

C. elegans as a Model System to Study the Biology of Protein Aggregation and Toxicity

Kikis, E. A., Ben-Zhi, A. & Morimoto, R. I., 2010, Protein Misfolding Diseases: Current and Emerging Principles and Therapies. Ramirez-Alvarado, M., Kelly, J. & Dobson, C. (eds.). Wiley Press, p. 175-190

Research output: Chapter in Book/Report/Conference proceedingChapter

Caenorhabditis Elegans as a Model System to Study the Biology of Protein Aggregation and Toxicity

Kikis, E. A., Ben-Zvi, A. & Morimoto, R. I., Jul 2 2010, Protein Misfolding Diseases: Current and Emerging Principles and Therapies. John Wiley and Sons, p. 175-190 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Protein homeostasis in models of aging and age-related conformational disease

Kikis, E. A., Gidalevitz, T. & Morimoto, R. I., Dec 1 2010, Protein Metabolism and Homeostasis in Aging. Tavernarakis, N. (ed.). p. 138-159 22 p. (Advances in Experimental Medicine and Biology; vol. 694).

Research output: Chapter in Book/Report/Conference proceedingChapter

106 Scopus citations

Structural studies of ribonuclease P

Mondragon, A., Jan 1 2010, Ribonuclease P. Vol. 10. p. 63-78 16 p. (Protein Reviews; vol. 10).

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

The heat shock response and the stress of misfolded proteins

Morimoto, R. I. & Westerheide, S. D., Dec 1 2010, Handbook of Cell Signaling, 2/e. Elsevier Inc, Vol. 3. p. 2231-2239 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Two-Domain Multicopper Oxidase

Lawton, T. J. & Rosenzweig, A. C., 2010, Handbook of Metalloproteins: Volumes 4 & 5. Messerschmidt, A. (ed.). John Wiley and Sons Ltd., p. 591-599 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2009

Micromechanics of Single Supercoiled DNA Molecules: The IMA Volumes in Mathematics and its Application

Marko, J. F., 2009, Mathematics of DNA Structure, Function and Interactions: The IMA Volumes in Mathematics and its Application. Benham, C. J., Harvey, S., Olson, W. K., Sumners, D. W. L. & Swigon, D. (eds.). Springer

Research output: Chapter in Book/Report/Conference proceedingChapter

2008

Influenza

Lamb, R. A., Jan 1 2008, Encyclopedia of Virology. Mahy, B. W. J. & van Regenmortel, M. H. V. (eds.). Elsevier Ltd., p. 95-104 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations

Particulate Methane Monooxygenase

Rosenzweig, A. C., 2008, Handbook of Metalloproteins: Volumes 4 & 5. Messerschmidt, A. (ed.). John Wiley and Sons Ltd., p. 615-622 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Polyglutamine Aggregates as a Model for Protein-misfolding Diseases

Kim, S., Morley, J. F., Ben-Zvi, A. & Morimoto, R. I., Jan 31 2008, Protein Folding Handbook. Wiley-VCH Verlag GmbH, Vol. 3. p. 1175-1199 25 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

The Sonic Hedgehog Signaling Pathway

Iannaccone, P., Holmgren, R., Lamm, M. L. G., Ahlgren, S., Lakiza, O., Yoon, J. W. & Walterhouse, D., 2008, Inborn Errors of Development. Epstein, CJ., Erickson, RP. & Wynshaw-Boris, A. (eds.). Second edition ed. Oxford: Oxford University Press, p. 263-279

Research output: Chapter in Book/Report/Conference proceedingChapter

2007

Cell Signaling by Peptide Hormones

Mayo, K. E., 2007, Frontiers in Reproductive Endocrinology: A Comprehensive Review and Update. Rockland, MA: BioSymposium, Inc., p. 109-119

Research output: Chapter in Book/Report/Conference proceedingChapter

Hormone Action Mediated by Nuclear Receptors

Mayo, K. E., 2007, Frontiers in Reproductive Endocrinology: A Comprehensive Review and Update. Rockland, MA: BioSymposium, Inc., p. 129-138

Research output: Chapter in Book/Report/Conference proceedingChapter

HSP90 Co-chaperones in saccharomyces cerevisiae

Tesic, M. & Gaber, R. F., Dec 1 2007, Yeast as a Tool in Cancer Research. Springer Netherlands, p. 141-177 37 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Mononegavirales

Lamb, R. A., 2007, Fields Virology. Knipe, D. M. & Howley, P. M. (eds.). Philadelphia: Lippincott, Williams and Wilkins, p. 1357-1361

Research output: Chapter in Book/Report/Conference proceedingChapter

Multiple roles for Wnt signaling in the development of the vertebrate neural crest

Heeg-Truesdell, E. & LaBonne, C., Jan 4 2007, Wnt Signaling in Embryonic Development. Sokol, S. (ed.). p. 203-221 19 p. (Advances in Developmental Biology; vol. 17).

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations