Research Output

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Review article
2019

Identification and Quantification of Proteoforms by Mass Spectrometry

Schaffer, L. V., Millikin, R. J., Miller, R. M., Anderson, L. C., Fellers, R. T., Ge, Y., Kelleher, N. L., LeDuc, R. D., Liu, X., Payne, S. H., Sun, L., Thomas, P. M., Tucholski, T., Wang, Z., Wu, S., Wu, Z., Yu, D., Shortreed, M. R. & Smith, L. M., May 2019, In : Proteomics. 19, 10, 1800361.

Research output: Contribution to journalReview article

20 Scopus citations
2018

How many human proteoforms are there?

Aebersold, R., Agar, J. N., Amster, I. J., Baker, M. S., Bertozzi, C. R., Boja, E. S., Costello, C. E., Cravatt, B. F., Fenselau, C., Garcia, B. A., Ge, Y., Gunawardena, J., Hendrickson, R. C., Hergenrother, P. J., Huber, C. G., Ivanov, A. R., Jensen, O. N., Jewett, M. C., Kelleher, N. L., Kiessling, L. L. & 33 others, Krogan, N. J., Larsen, M. R., Loo, J. A., Ogorzalek Loo, R. R., Lundberg, E., Maccoss, M. J., Mallick, P., Mootha, V. K., Mrksich, M., Muir, T. W., Patrie, S. M., Pesavento, J. J., Pitteri, S. J., Rodriguez, H., Saghatelian, A., Sandoval, W., Schlüter, H., Sechi, S., Slavoff, S. A., Smith, L. M., Snyder, M. P., Thomas, P. M., Uhlén, M., Van Eyk, J. E., Vidal, M., Walt, D. R., White, F. M., Williams, E. R., Wohlschlager, T., Wysocki, V. H., Yates, N. A., Young, N. L. & Zhang, B., Feb 14 2018, In : Nature Chemical Biology. 14, 3, p. 206-214 9 p.

Research output: Contribution to journalReview article

113 Scopus citations
2016

Advances in protein complex analysis by chemical cross-linking coupled with mass spectrometry (CXMS) and bioinformatics

Tran, B. Q., Goodlett, D. R. & Goo, Y. A., Jan 2016, In : Biochimica et Biophysica Acta - Proteins and Proteomics. 1864, 1, p. 123-129 7 p.

Research output: Contribution to journalReview article

23 Scopus citations
2014

Deep and quantitative top-down proteomics in clinical and translational research

Kelleher, N. L., Thomas, P. M., Ntai, I., Compton, P. D. & Leduc, R. D., Jan 1 2014, In : Expert Review of Proteomics. 11, 6, p. 649-651 3 p.

Research output: Contribution to journalReview article

28 Scopus citations
2013

Developing top down proteomics to maximize proteome and sequence coverage from cells and tissues

Ahlf, D. R., Thomas, P. M. & Kelleher, N. L., Oct 1 2013, In : Current Opinion in Chemical Biology. 17, 5, p. 787-794 8 p.

Research output: Contribution to journalReview article

36 Scopus citations
2011

Searching for the Noninvasive Biomarker Holy Grail: Are Urine Proteomics the Answer?

Voss, J., Goo, Y. A., Cain, K., Woods, N., Jarrett, M., Smith, L., Shulman, R. & Heitkemper, M., Jul 1 2011, In : Biological Research for Nursing. 13, 3, p. 235-242 8 p.

Research output: Contribution to journalReview article

13 Scopus citations
2010

Advances in proteomic prostate cancer biomarker discovery

Goo, Y. A. & Goodlett, D. R., Sep 1 2010, In : Journal of Proteomics. 73, 10, p. 1839-1850 12 p.

Research output: Contribution to journalReview article

51 Scopus citations

The emerging process of Top Down mass spectrometry for protein analysis: Biomarkers, protein-therapeutics, and achieving high throughput

Kellie, J. F., Tran, J. C., Lee, J. E., Ahlf, D. R., Thomas, H. M., Ntai, I., Catherman, A. D., Durbin, K. R., Zamdborg, L., Vellaichamy, A., Thomas, P. M. & Kelleher, N. L., Sep 1 2010, In : Molecular BioSystems. 6, 9, p. 1532-1539 8 p.

Research output: Contribution to journalReview article

72 Scopus citations
2008

Minimum information specification for in situ hybridization and immunohistochemistry experiments (MISFISHIE)

Deutsch, E. W., Ball, C. A., Berman, J. J., Bova, G. S., Brazma, A., Bumgarner, R. E., Campbell, D., Causton, H. C., Christiansen, J. H., Daian, F., Dauga, D., Davidson, D. R., Gimenez, G., Goo, Y. A., Grimmond, S., Henrich, T., Herrmann, B. G., Johnson, M. H., Korb, M., Mills, J. C. & 20 others, Oudes, A. J., Parkinson, H. E., Pascal, L. E., Pollet, N., Quackenbush, J., Ramialison, M., Ringwald, M., Salgado, D., Sansone, S. A., Sherlock, G., Stoeckert, C. J., Swedlow, J., Taylor, R. C., Walashek, L., Warford, A., Wilkinson, D. G., Zhou, Y., Zon, L. I., Liu, A. Y. & True, L. D., Mar 1 2008, In : Nature biotechnology. 26, 3, p. 305-312 8 p.

Research output: Contribution to journalReview article

86 Scopus citations
2006

Development of the Minimum Information Specification for In Situ Hybridization and Immunohistochemistry Experiments (MISFISHIE)

Deutsch, E. W., Ball, C. A., Bova, G. S., Brazma, A., Bumgarner, R. E., Campbell, D., Causton, H. C., Christiansen, J., Davidson, D., Eichner, L. J., Goo, Y. A., Grimmond, S., Henrich, T., Johnson, M. H., Korb, M., Mills, J. C., Oudes, A., Parkinson, H. E., Pascal, L. E., Quackenbush, J. & 11 others, Ramialison, M., Ringwald, M., Sansone, S. A., Sherlock, G., Stoeckert, C. J., Swedlow, J., Taylor, R. C., Walashek, L., Zhou, Y., Liu, A. Y. & True, L. D., Sep 4 2006, In : OMICS A Journal of Integrative Biology. 10, 2, p. 205-208 4 p.

Research output: Contribution to journalReview article

16 Scopus citations