Surgery, Thoracic Surgery Division

Research Output 1967 2019

2019

All work and no play: Addressing medical students’ concerns about duty hours on the surgical clerkship

Barnum, T. J., Halverson, A. L., Helenowski, I. & Odell, D. D., Aug 1 2019, In : American journal of surgery. 218, 2, p. 419-423 5 p.

Research output: Contribution to journalArticle

Medical Students
Students
Internal Medicine
Workload
Logistic Models
Safety Management
Quality Improvement
Morbidity
Nurses
Administrative Personnel
4 Citations (Scopus)

Bronchus-associated lymphoid tissue–resident Foxp3 + T lymphocytes prevent antibody-mediated lung rejection

Li, W., Gauthier, J. M., Higashikubo, R., Hsiao, H. M., Tanaka, S., Vuong, L., Ritter, J. H., Tong, A. Y., Wong, B. W., Hachem, R. R., Puri, V., Bharat, A., Krupnick, A. S., Hsieh, C. S., Baldwin, W. M., Kelly, F. L., Palmer, S. M., Gelman, A. E. & Kreisel, D., Feb 1 2019, In : Journal of Clinical Investigation. 129, 2, p. 556-568 13 p.

Research output: Contribution to journalArticle

Bronchi
T-Lymphocytes
Lung
Antibodies
Transplants
1 Citation (Scopus)

Clinical relevance of lung-restricted antibodies in lung transplantation

Akbarpour, M., Wu, Q., Liu, X., Sun, H., Lecuona, E., Tomic, R., Bhorade, S. M., Mohanakumar, T. & Bharat, A., Jan 1 2019, In : Human Immunology.

Research output: Contribution to journalReview article

Lung Transplantation
Lung
Antibodies
Allografts
HLA Antigens
4 Citations (Scopus)

Conducting high-quality research in cardiothoracic surgical education: Recommendations from the Thoracic Education Cooperative Group

Antonoff, M. B., Nguyen, S., Nguyen, T. C. & Odell, D. D., Feb 1 2019, In : Journal of Thoracic and Cardiovascular Surgery. 157, 2, p. 820-827.e1

Research output: Contribution to journalArticle

Thorax
Education
Research
Ethics
Sample Size

Erratum: Metformin Targets Mitochondrial Electron Transport to Reduce Air-Pollution-Induced Thrombosis (Cell Metabolism (2019) 29(2) (335–347.e5), (S1550413118305862) (10.1016/j.cmet.2018.09.019))

Soberanes, S., Misharin, A., Jairaman, A., Morales-Nebreda, L., McQuattie-Pimentel, A. C., Cho, T., Hamanaka, R. B., Meliton, A. Y., Reyfman, P. A., Walter, J. M., Chen, C. I., Chi, M., Chiu, S., Gonzalez-Gonzalez, F. J., Antalek, M., Abdala-Valencia, H., Chiarella, S. E., Sun, K. A., Woods, P. S., Ghio, A. J. & 12 others, Jain, M., Perlman, H. R., Ridge, K. M., Morimoto, R. I., Sznajder, J. I., Balch, W. E., Bhorade, S. M., Bharat, A., Prakriya, M., Chandel, N., Mutlu, G. M. & Budinger, GR. S., Feb 5 2019, In : Cell Metabolism. 29, 2, 1 p.

Research output: Contribution to journalComment/debate

Metformin
Air Pollution
Electron Transport
Names
Publications
3 Citations (Scopus)

Evaluation of adherence to the Commission on Cancer lung cancer quality measures

Odell, D. D., Feinglass, J. M., Engelhardt, K., Papastefan, S., Meyerson, S. L., Bharat, A., DeCamp, M. M. & Bilimoria, K. Y., Mar 1 2019, In : Journal of Thoracic and Cardiovascular Surgery. 157, 3, p. 1219-1235 17 p.

Research output: Contribution to journalArticle

Lung Neoplasms
Adjuvant Chemotherapy
Drug Therapy
Ambulatory Surgical Procedures
Non-Small Cell Lung Carcinoma

Gut microbiota can impact chronic murine lung allograft rejection

Wu, Q., Turturice, B., Wagner, S., Huang, Y., Gupta, P. K., Schott, C., Metwally, A., Ranjan, R., Perkins, D., Alegre, M. L., Finn, P., Budinger, GR. S., Shilling, R. & Bharat, A., Jan 1 2019, In : American journal of respiratory cell and molecular biology. 60, 1, p. 131-134 4 p.

Research output: Contribution to journalLetter

Allografts
Lung
Gastrointestinal Microbiome

Hidden treasures in contemporary RNA sequencing

Mangul, S., Yang, H. T., Eskin, E. & Zaitlen, N., Jan 1 2019, SpringerBriefs in Computer Science. Springer, p. 1-93 93 p. (SpringerBriefs in Computer Science).

Research output: Chapter in Book/Report/Conference proceedingChapter

RNA
Cells
Tissue
Immune system
Gene expression

How bioinformatics and open data can boost basic science in countries and universities with limited resources

Mangul, S., Martin, L. S., Langmead, B., Sanchez-Galan, J. E., Toma, I., Hormozdiari, F., Pevzner, P. & Eskin, E., Mar 1 2019, In : Nature biotechnology. 37, 3, p. 324-326 3 p.

Research output: Contribution to journalArticle

Scanning Transmission Electron Microscopy
Bioinformatics
Computational Biology
Hardware
Research
2 Citations (Scopus)

How Many Observations are Needed to Assess a Surgical Trainee's State of Operative Competency?

Williams, R. G., Swanson, D. B., Fryer, J. P., Meyerson, S. L., Bohnen, J. D., Dunnington, G. L., Scully, R. E., Schuller, M. C. & George, B. C., Feb 1 2019, In : Annals of Surgery. 269, 2, p. 377-382 6 p.

Research output: Contribution to journalArticle

Laparoscopic Cholecystectomy
Diagnosis-Related Groups
Operative Surgical Procedures
Certification
Analysis of Variance

Identifying and Addressing High Priority Issues in General Surgery Training and Education

Fryer, J. P., Schuller, M., Wnuk, G., Meyerson, S. L., Zwischenberger, J., Meier, A., Williams, R. & George, B., Jan 1 2019, In : Journal of Surgical Education. 76, 1, p. 50-54 5 p.

Research output: Contribution to journalArticle

Internship and Residency
surgery
Learning
Safety
Education
1 Citation (Scopus)

Improving the usability and archival stability of bioinformatics software

Mangul, S., Martin, L. S., Eskin, E. & Blekhman, R., Feb 27 2019, In : Genome biology. 20, 1, 47.

Research output: Contribution to journalReview article

Open Access
bioinformatics
Computational Biology
Software
software
Publications

Long-Term Impact of Cytomegalovirus Serologic Status on Lung Transplantation in the United States

Kurihara, C., Fernandez, R., Safaeinili, N., Akbarpour, M., Wu, Q., Budinger, GR. S. & Bharat, A., Apr 1 2019, In : Annals of Thoracic Surgery. 107, 4, p. 1046-1052 7 p.

Research output: Contribution to journalArticle

Lung Transplantation
Cytomegalovirus
Tissue Donors
Mortality
Bronchiolitis Obliterans
1 Citation (Scopus)

Measuring the quality of multi-disciplinary thoracic oncology care

Wakeam, E., Odell, D. D. & Samson, P., Jan 1 2019, In : Journal of Thoracic Disease. 11, p. S562-S565

Research output: Contribution to journalReview article

Thorax
Quality of Health Care

MiCoP: Microbial community profiling method for detecting viral and fungal organisms in metagenomic samples

Lapierre, N., Mangul, S., Alser, M., Mandric, I., Wu, N. C., Koslicki, D. & Eskin, E., Jun 6 2019, In : BMC Genomics. 20, 423.

Research output: Contribution to journalArticle

Open Access
Metagenomics
Microbiota
Eukaryota
Viruses
Databases
1 Citation (Scopus)

Multidimensional assessment of the host response in mechanically ventilated patients with suspected pneumonia

Walter, J. M., Ren, Z., Yacoub, T., Reyfman, P. A., Shah, R. D., Abdala-Valencia, H., Nam, K., Morgan, V. K., Anekalla, K. R., Joshi, N., McQuattie-Pimentel, A. C., Chen, C. I., Chi, M., Han, S. H., Gonzalez-Gonzalez, F. J., Soberanes, S., Aillon, R. P., Watanabe, S., Williams, K. J. N., Lu, Z. & 13 others, Paonessa, J., Hountras, P., Breganio, M., Borkowski, N., Donnelly, H. K., Allen, J. P., Amaral, L. A. N., Bharat, A., Misharin, A., Bagheri, N., Hauser, A. R., Budinger, GR. S. & Wunderink, R. G., May 15 2019, In : American journal of respiratory and critical care medicine. 199, 10, p. 1225-1237 13 p.

Research output: Contribution to journalArticle

Bacterial Pneumonia
Pneumonia
Macrophages
Bronchoalveolar Lavage Fluid
Alveolar Macrophages

Optimizing health before elective thoracic surgery: Systematic review of modifiable risk factors and opportunities for health services research

Stokes, S. M., Wakeam, E., Antonoff, M. B., Backhus, L. M., Meguid, R. A., Odell, D. D. & Varghese, T. K., Jan 1 2019, In : Journal of Thoracic Disease. 11, p. S537-S554

Research output: Contribution to journalReview article

Health Services Research
Thoracic Surgery
Hope
Health
Thorax

The effect of gender on operative autonomy in general surgery residents

Procedural Learning and Safety Collaborative, Jan 1 2019, In : Surgery (United States).

Research output: Contribution to journalArticle

Education
Sex Characteristics
Logistic Models
Regression Analysis
Smartphone
1 Citation (Scopus)

The role of donor-derived exosomes in lung allograft rejection

Ravichandran, R., Bansal, S., Rahman, M., Sharma, M., Liu, W., Bharat, A., Hachem, R., Omar, A., Smith, M. A. & Mohanakumar, T., Jan 1 2019, In : Human Immunology.

Research output: Contribution to journalReview article

Exosomes
Allografts
Tissue Donors
Lung
Autoantigens
Right Ventricular Dysfunction
Extracorporeal Membrane Oxygenation
Lung Transplantation
2018
2 Citations (Scopus)

A beginner’s guide to analysis of RNA sequencing data

Koch, C. M., Chiu, S. F., Akbarpour, M., Bharat, A., Ridge, K. M., Bartom, E. T. & Winter, D. R., Aug 1 2018, In : American journal of respiratory cell and molecular biology. 59, 2, p. 145-157 13 p.

Research output: Contribution to journalReview article

RNA Sequence Analysis
RNA
Publications
Research Personnel
Bioinformatics
2 Citations (Scopus)

A novel strategy for cardiopulmonary support during lung transplantation

Fernandez, R., DeCamp Jr, M. M. & Bharat, A., Feb 1 2018, In : Journal of Thoracic Disease. 10, 2, p. E142-E144

Research output: Contribution to journalArticle

Lung Transplantation
Heart Ventricles
Cardiopulmonary Bypass
Extracorporeal Membrane Oxygenation
Disease Susceptibility
5 Citations (Scopus)

Association of body mass index with lung transplantation survival in the United States following implementation of the lung allocation score

Fernandez, R., Safaeinili, N., Kurihara, C., Odell, D. D., Jain, M., DeCamp Jr, M. M., Budinger, GR. S. & Bharat, A., Apr 1 2018, In : Journal of Thoracic and Cardiovascular Surgery. 155, 4, p. 1871-1879.e3

Research output: Contribution to journalArticle

Lung Transplantation
Body Mass Index
Lung
Survival
Mortality
2 Citations (Scopus)

Association of cardiomyopathy with MYBPC3 D389V and MYBPC3 Δ25bp intronic deletion in south asian descendants

Viswanathan, S. K., Roy-Puckelwartz, M. J., Mehta, A., Ramachandra, C. J. A., Jagadeesan, A., Fritsche-Danielson, R., Bhat, R. V., Wong, P., Kandoi, S., Schwanekamp, J. A., Kuffel, G., Pesce, L. L., Zilliox, M. J., Durai, U. N. B., Verma, R. S., Molokie, R. E., Suresh, D. P., Khoury, P. R., Thomas, A., Sanagala, T. & 6 others, Tang, H. C., Becker, R. C., Knoll, R., Shim, W., McNally, E. M. & Sadayappan, S., Jun 1 2018, In : JAMA cardiology. 3, 6, p. 481-488 8 p.

Research output: Contribution to journalArticle

Cardiomyopathies
Cardiac Myocytes
Genotype
Phenotype
Induced Pluripotent Stem Cells

A young man with progressive esophageal neoplasms

Shen, Y., Shen, J., Phan, K., Tian, D., D'Amico, T. A., Berry, M. F., Blackmon, S. H., Meyerson, S. L., D'Journo, X. B., Chen, Y. J., Baron, G., Hou, Y. & Tan, L., Nov 1 2018, In : Journal of Thoracic Disease. 10, 11, p. 5985-5990 6 p.

Research output: Contribution to journalArticle

Esophageal Neoplasms
1 Citation (Scopus)
Extracorporeal Membrane Oxygenation
Adult Respiratory Distress Syndrome
Intravenous Administration
Severe Acute Respiratory Syndrome
Water-Electrolyte Balance

Comparing apples to oranges: Short-term mortality after surgery versus stereotactic body radiotherapy for early-stage non-small cell lung cancer

Engelhardt, K. E., Odell, D. D. & DeCamp Jr, M. M., Jun 1 2018, In : Journal of Thoracic Disease. 10, p. S1974-S1976

Research output: Contribution to journalEditorial

Radiosurgery
Malus
Non-Small Cell Lung Carcinoma
Mortality
1 Citation (Scopus)

Convergent downstream candidate mechanisms of independent intergenic polymorphisms between co-classified diseases implicate epistasis among noncoding elements

Han, J., Li, J., Achour, I., Pesce, L. L., Foster, I., Li, H. & Lussier, Y. A., Jan 1 2018, In : Pacific Symposium on Biocomputing. 0, 212669, p. 524-535 12 p.

Research output: Contribution to journalConference article

Polymorphism
Single Nucleotide Polymorphism
Messenger RNA
Odds Ratio
Proteins
3 Citations (Scopus)

Effect of Ongoing Assessment of Resident Operative Autonomy on the Operating Room Environment

Fryer, J. P., Teitelbaum, E. N., George, B. C., Schuller, M. C., Meyerson, S. L., Theodorou, C. M., Kang, J., Yang, A., Zhao, L. & DaRosa, D., Mar 1 2018, In : Journal of Surgical Education. 75, 2, p. 333-343 11 p.

Research output: Contribution to journalArticle

Operating Rooms
autonomy
resident
supervision
surgery
39 Citations (Scopus)

Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics

Barbeira, A. N., Dickinson, S. P., Bonazzola, R., Zheng, J., Wheeler, H. E., Torres, J. M., Torstenson, E. S., Shah, K. P., Garcia, T., Edwards, T. L., Stahl, E. A., Huckins, L. M., Aguet, F., Ardlie, K. G., Cummings, B. B., Gelfand, E. T., Getz, G., Hadley, K., Handsaker, R. E., Huang, K. H. & 225 others, Kashin, S., Karczewski, K. J., Lek, M., Li, X., MacArthur, D. G., Nedzel, J. L., Nguyen, D. T., Noble, M. S., Segrè, A. V., Trowbridge, C. A., Tukiainen, T., Abell, N. S., Balliu, B., Barshir, R., Basha, O., Battle, A., Bogu, G. K., Brown, A., Brown, C. D., Castel, S. E., Chen, L. S., Chiang, C., Conrad, D. F., Damani, F. N., Davis, J. R., Delaneau, O., Dermitzakis, E. T., Engelhardt, B. E., Eskin, E., Ferreira, P. G., Frésard, L., Gamazon, E. R., Garrido-Martín, D., Gewirtz, A. D. H., Gliner, G., Gloudemans, M. J., Guigo, R., Hall, I. M., Han, B., He, Y., Hormozdiari, F., Howald, C., Jo, B., Kang, E. Y., Kim, Y., Kim-Hellmuth, S., Lappalainen, T., Li, G., Li, X., Liu, B., Mangul, S., McCarthy, M. I., McDowell, I. C., Mohammadi, P., Monlong, J., Montgomery, S. B., Muñoz-Aguirre, M., Ndungu, A. W., Nobel, A. B., Oliva, M., Ongen, H., Palowitch, J. J., Panousis, N., Papasaikas, P., Park, Y. S., Parsana, P., Payne, A. J., Peterson, C. B., Quan, J., Reverter, F., Sabatti, C., Saha, A., Sammeth, M., Scott, A. J., Shabalin, A. A., Sodaei, R., Stephens, M., Stranger, B. E., Strober, B. J., Sul, J. H., Tsang, E. K., Urbut, S., Van De Bunt, M., Wang, G., Wen, X., Wright, F. A., Xi, H. S., Yeger-Lotem, E., Zappala, Z., Zaugg, J. B., Zhou, Y. H., Akey, J. M., Bates, D., Chan, J., Claussnitzer, M., Demanelis, K., Diegel, M., Doherty, J. A., Feinberg, A. P., Fernando, M. S., Halow, J., Hansen, K. D., Haugen, E., Hickey, P. F., Hou, L., Jasmine, F., Jian, R., Jiang, L., Johnson, A., Kaul, R., Kellis, M., Kibriya, M. G., Lee, K., Li, J. B., Li, Q., Lin, J., Lin, S., Linder, S., Linke, C., Liu, Y., Maurano, M. T., Molinie, B., Nelson, J., Neri, F. J., Park, Y., Pierce, B. L., Rinaldi, N. J., Rizzardi, L. F., Sandstrom, R., Skol, A., Smith, K. S., Snyder, M. P., Stamatoyannopoulos, J., Tang, H., Wang, L., Wang, M., Van Wittenberghe, N., Wu, F., Zhang, R., Nierras, C. R., Branton, P. A., Carithers, L. J., Guan, P., Moore, H. M., Rao, A., Vaught, J. B., Gould, S. E., Lockart, N. C., Martin, C., Struewing, J. P., Volpi, S., Addington, A. M., Koester, S. E., Little, A. R., Brigham, L. E., Hasz, R., Hunter, M., Johns, C., Johnson, M., Kopen, G., Leinweber, W. F., Lonsdale, J. T., McDonald, A., Mestichelli, B., Myer, K., Roe, B., Salvatore, M., Shad, S., Thomas, J. A., Walters, G., Washington, M., Wheeler, J., Bridge, J., Foster, B. A., Gillard, B. M., Karasik, E., Kumar, R., Miklos, M., Moser, M. T., Jewell, S. D., Montroy, R. G., Rohrer, D. C., Valley, D. R., Davis, D. A., Mash, D. C., Undale, A. H., Smith, A. M., Tabor, D. E., Roche, N. V., McLean, J. A., Vatanian, N., Robinson, K. L., Sobin, L., Barcus, M. E., Valentino, K. M., Qi, L., Hunter, S., Hariharan, P., Singh, S., Um, K. S., Matose, T., Tomaszewski, M. M., Barker, L. K., Mosavel, M., Siminoff, L. A., Traino, H. M., Flicek, P., Juettemann, T., Ruffier, M., Sheppard, D., Taylor, K., Trevanion, S. J., Zerbino, D. R., Craft, B., Goldman, M., Haeussler, M., Kent, W. J., Lee, C. M., Paten, B., Rosenbloom, K. R., Vivian, J., Zhu, J., Nicolae, D. L., Cox, N. J. & Im, H. K., Dec 1 2018, In : Nature communications. 9, 1, 1825.

Research output: Contribution to journalArticle

Open Access
phenotype
gene expression
Genome-Wide Association Study
Gene expression
Genes
3 Citations (Scopus)
Severe Acute Respiratory Syndrome
Extracorporeal Membrane Oxygenation
Adult Respiratory Distress Syndrome
Artificial Respiration
Vital Capacity
3 Citations (Scopus)

Identifying the substrate proteins of U-box E3s E4B and CHIP by orthogonal ubiquitin transfer

Bhuripanyo, K., Wang, Y., Liu, X., Zhou, L., Liu, R., Duong, D., Zhao, B., Bi, Y., Zhou, H., Chen, G., Seyfried, N. T., Chazin, W. J., Kiyokawa, H. & Yin, J., Jan 1 2018, In : Science Advances. 4, 1, e1701393.

Research output: Contribution to journalArticle

HSC70 Heat-Shock Proteins
Ubiquitin
Cyclin-Dependent Kinase 4
Proteins
Phosphoric Monoester Hydrolases
2 Citations (Scopus)

Immunopathogenesis of Primary Graft Dysfunction After Lung Transplantation

Bharat, A. & Kreisel, D., Mar 1 2018, In : Annals of Thoracic Surgery. 105, 3, p. 671-674 4 p.

Research output: Contribution to journalEditorial

Primary Graft Dysfunction
Lung Transplantation
4 Citations (Scopus)

Indoleamine 2,3-dioxygenase 1 and overall survival of patients diagnosed with esophageal cancer

Rosenberg, A. J., Wainwright, D. A., Rademaker, A. W., Galvez, C., Genet, M., Zhai, L., Lauing, K. L., Mulcahy, M. F., Hayes, J. P., Odell, D. D., Horbinski, C. M., Komanduri, S., Tetreault, M-P., Kim, K-Y. A. & Villaflor, V. M., May 1 2018, In : Oncotarget. 9, 34, p. 23482-23493 12 p.

Research output: Contribution to journalArticle

Indoleamine-Pyrrole 2,3,-Dioxygenase
Esophageal Neoplasms
Survival
Ligands
Squamous Cell Carcinoma

Inflammatory pathways are upregulated in the nasal epithelium in patients with idiopathic pulmonary fibrosis

Sala, M. A., Balderas-Martínez, Y. I., Buendía-Roldan, I., Abdala-Valencia, H., Nam, K., Jain, M., Bhorade, S. M., Bharat, A., Reyfman, P. A., Ridge, K. M., Pardo, A., Sznajder, J. I., Budinger, GR. S., Misharin, A. & Selman, M., Nov 26 2018, In : Respiratory Research. 19, 1, 233.

Research output: Contribution to journalArticle

Idiopathic Pulmonary Fibrosis
Nasal Mucosa
Nose
Up-Regulation
RNA Sequence Analysis
1 Citation (Scopus)

Is the operative autonomy granted to a resident consistent with operative performance quality

Procedural Learning and Safety Collaborative, Sep 1 2018, In : Surgery (United States). 164, 3, p. 566-570 5 p.

Research output: Contribution to journalArticle

Internship and Residency
Surgeons
1 Citation (Scopus)

Metformin Targets Mitochondrial Electron Transport to Reduce Air-Pollution-Induced Thrombosis

Soberanes, S., Misharin, A. V., Jairaman, A., Morales-Nebreda, L., McQuattie-Pimentel, A. C., Cho, T., Hamanaka, R. B., Meliton, A. Y., Reyfman, P. A., Walter, J. M., Chen, C-I., Chi, M., Chiu, S., Gonzalez-Gonzalez, F. J., Antalek, M., Abdala-Valencia, H., Chiarella, S. E., Sun, K. A., Woods, P. S., Ghio, A. J. & 12 others, Jain, M., Perlman, H., Ridge, K. M., Morimoto, R. I., Sznajder, J. I., Balch, W. E., Bhorade, S. M., Bharat, A., Prakriya, M., Chandel, N. S., Mutlu, G. M. & Budinger, G. R. S., Oct 11 2018, In : Cell Metabolism.

Research output: Contribution to journalArticle

Metformin
Air Pollution
Electron Transport
Particulate Matter
Alveolar Macrophages
1 Citation (Scopus)

One size does not fit all: Nuances in postoperative N2 non–small cell lung cancer management

Kruser, T. J., Mohindra, N. A. & DeCamp Jr, M. M., Jul 1 2018, In : Journal of Thoracic and Cardiovascular Surgery. 156, 1, p. 370-373 4 p.

Research output: Contribution to journalEditorial

Non-Small Cell Lung Carcinoma
2 Citations (Scopus)

PD-1 expression on CD8 + T cells regulates their differentiation within lung allografts and is critical for tolerance induction

Takahashi, T., Hsiao, H. M., Tanaka, S., Li, W., Higashikubo, R., Scozzi, D., Bharat, A., Ritter, J. H., Krupnick, A. S., Gelman, A. E. & Kreisel, D., Jan 1 2018, In : American Journal of Transplantation. 18, 1, p. 216-225 10 p.

Research output: Contribution to journalArticle

Allografts
Lung Transplantation
Cell Death
T-Lymphocytes
Lung
2 Citations (Scopus)

Pericardial Disease Associated with Malignancy

Schusler, R. & Meyerson, S. L., Oct 1 2018, In : Current Cardiology Reports. 20, 10, 92.

Research output: Contribution to journalReview article

Recurrence
Pericardiocentesis
Neoplasms
Drainage
Sclerosing Solutions
4 Citations (Scopus)

Population-based differences in the outcome and presentation of lung cancer patients based upon racial, histologic, and economic factors in all lung patients and those with metastatic disease

Varlotto, J. M., Voland, R., McKie, K., Flickinger, J. C., DeCamp Jr, M. M., Maddox, D., Rava, P., Fitzgerald, T. J., Graeber, G., Rassaei, N., Oliveira, P., Ali, S., Belani, C., Glanzman, J., Wakelee, H. A., Patel, M., Baima, J., Zhang, J. & Walsh, W., Apr 1 2018, In : Cancer medicine. 7, 4, p. 1211-1220 10 p.

Research output: Contribution to journalArticle

Lung Neoplasms
Economics
Lung
Survival
Insurance
10 Citations (Scopus)

Relationship of procedural numbers with meaningful procedural autonomy in general surgery residents

Stride, H. P., George, B. C., Williams, R. G., Bohnen, J. D., Eaton, M. J., Schuller, M. C., Zhao, L., Yang, A., Meyerson, S. L., Scully, R., Dunnington, G. L., Torbeck, L., Mullen, J. T., Mandell, S. P., Choti, M., Foley, E., Are, C., Auyang, E., Chipman, J., Choi, J. & 9 others, Meier, A., Smink, D., Terhune, K. P., Wise, P., DaRosa, D., Soper, N. J., Zwischenberger, J. B., Lillemoe, K. & Fryer, J. P., Mar 1 2018, In : Surgery (United States). 163, 3, p. 488-494 7 p.

Research output: Contribution to journalArticle

Herniorrhaphy
Mental Competency
Ventral Hernia
Appendectomy
Colectomy

Reply

Rajaram, R. & DeCamp Jr, M. M., Jan 1 2018, In : Annals of Thoracic Surgery. 105, 1, p. 337-338 2 p.

Research output: Contribution to journalLetter

4 Citations (Scopus)

ROP: Dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues

Mangul, S., Yang, H. T., Strauli, N., Gruhl, F., Porath, H. T., Hsieh, K., Chen, L., Daley, T., Christenson, S., Wesolowska-Andersen, A., Spreafico, R., Rios, C., Eng, C., Smith, A. D., Hernandez, R. D., Ophoff, R. A., Santana, J. R., Levanon, E. Y., Woodruff, P. G., Burchard, E. & 4 others, Seibold, M. A., Shifman, S., Eskin, E. & Zaitlen, N., Feb 15 2018, In : Genome biology. 19, 1, 36.

Research output: Contribution to journalArticle

Open Access
RNA Sequence Analysis
Diving
diving
RNA
sequence analysis
2 Citations (Scopus)

Short-Term Outcomes of Tracheal Resection in The Society of Thoracic Surgeons Database

Stanifer, B. P., Andrei, A-C., Liu, M., Meyerson, S. L., Bharat, A., Odell, D. D. & DeCamp, M. M., Dec 1 2018, In : Annals of Thoracic Surgery. 106, 6, p. 1612-1618 7 p.

Research output: Contribution to journalArticle

Databases
Mortality
Morbidity
Thorax
Thoracic Surgery

Single-Cell Transcriptomic Analysis of Human Lung Provides Insights into the Pathobiology of Pulmonary Fibrosis

Reyfman, P. A., Walter, J. M., Joshi, N., Anekalla, K. R., McQuattie-Pimentel, A. C., Chiu, S., Fernandez, R., Akbarpour, M., Chen, C-I., Ren, Z., Verma, R., Abdala-Valencia, H., Nam, K., Chi, M., Han, S., Gonzalez-Gonzalez, F. J., Soberanes, S., Watanabe, S., Williams, K. J. N., Flozak, A. S. & 29 others, Nicholson, T. T., Morgan, V. K., Winter, D. R., Hinchcliff, M., Hrusch, C. L., Guzy, R. D., Bonham, C. A., Sperling, A. I., Bag, R., Hamanaka, R. B., Mutlu, G. M., Yeldandi, A. V., Marshall, S. A., Shilatifard, A., Amaral, L. A. N., Perlman, H., Sznajder, J. I., Argento, A. C., Gillespie, C. T., Dematte, J., Jain, M., Singer, B. D., Ridge, K. M., Lam, A. P., Bharat, A., Bhorade, S. M., Gottardi, C. J., Budinger, G. R. S. & Misharin, A. V., Dec 15 2018, In : American Journal of Respiratory and Critical Care Medicine.

Research output: Contribution to journalArticle

Single-Cell Analysis
Pulmonary Fibrosis
Lung
RNA Sequence Analysis
Alveolar Macrophages
1 Citation (Scopus)

Spatial Analysis of Single Fiber Cells of the Developing Ocular Lens Reveals Regulated Heterogeneity of Gene Expression

Gangalum, R. K., Kim, D., Kashyap, R. K., Mangul, S., Zhou, X., Elashoff, D. & Bhat, S. P., Dec 21 2018, In : iScience. 10, p. 66-79 14 p.

Research output: Contribution to journalArticle

Open Access
eye lens
fiber cells
Crystalline Lens
Spatial Analysis
Gene Expression
5 Citations (Scopus)

Spleen-derived classical monocytes mediate lung ischemia-reperfusion injury through IL-1ß

Hsiao, H. M., Fernandez, R., Tanaka, S., Li, W., Spahn, J. H., Chiu, S., Akbarpour, M., Ruiz-Perez, D., Wu, Q., Turam, C., Scozzi, D., Takahashi, T., Luehmann, H. P., Puri, V., Budinger, GR. S., Krupnick, A. S., Misharin, A., Lavine, K. J., Liu, Y., Gelman, A. E. & 2 others, Bharat, A. & Kreisel, D., Jul 2 2018, In : Journal of Clinical Investigation. 128, 7, p. 2833-2847 15 p.

Research output: Contribution to journalArticle

Reperfusion Injury
Interleukin-1
Monocytes
Spleen
Neutrophils

Surgical Treatment of Multifocal Pulmonary Mucormycosis

Mills, S. E. A., Yeldandi, A. V. & Odell, D. D., Aug 1 2018, In : Annals of Thoracic Surgery. 106, 2, p. e93-e95

Research output: Contribution to journalArticle

Mucormycosis
Lung
Mycoses
Opportunistic Infections
Debridement