Surgery, Thoracic Surgery Division

Research Output

2018

Spleen-derived classical monocytes mediate lung ischemia-reperfusion injury through IL-1ß

Hsiao, H. M., Fernandez, R., Tanaka, S., Li, W., Spahn, J. H., Chiu, S., Akbarpour, M., Ruiz-Perez, D., Wu, Q., Turam, C., Scozzi, D., Takahashi, T., Luehmann, H. P., Puri, V., Budinger, G. R. S., Krupnick, A. S., Misharin, A. V., Lavine, K. J., Liu, Y., Gelman, A. E. & 2 others, Bharat, A. & Kreisel, D., Jul 2 2018, In : Journal of Clinical Investigation. 128, 7, p. 2833-2847 15 p.

Research output: Contribution to journalArticle

14 Scopus citations

Surgical Treatment of Multifocal Pulmonary Mucormycosis

Mills, S. E. A., Yeldandi, A. V. & Odell, D. D., Aug 1 2018, In : Annals of Thoracic Surgery. 106, 2, p. e93-e95

Research output: Contribution to journalArticle

4 Scopus citations

The effect of smoking on 30-day outcomes in elective hernia repair

DeLancey, J. O., Blay, E., Hewitt, D. B., Engelhardt, K., Bilimoria, K. Y., Holl, J. L., Odell, D. D., Yang, A. D. & Stulberg, J. J., Sep 1 2018, In : American journal of surgery. 216, 3, p. 471-474 4 p.

Research output: Contribution to journalArticle

9 Scopus citations

The relationship between sweat chloride levels and mortality in cystic fibrosis varies by individual genotype

Espel, J. C., Palac, H. L., Bharat, A., Cullina, J., Prickett, M., Sala, M., McColley, S. A. & Jain, M., Jan 2018, In : Journal of Cystic Fibrosis. 17, 1, p. 34-42 9 p.

Research output: Contribution to journalArticle

4 Scopus citations

There's more than one way to skin this cat

Bharat, A., Mar 2018, In : Journal of Thoracic and Cardiovascular Surgery. 155, 3, 1 p.

Research output: Contribution to journalLetter

The role of race and economic characteristics in the presentation and survival of patients with surgically resected non-small cell lung cancer

Varlotto, J. M., McKie, K., Voland, R. P., Flickinger, J. C., DeCamp, M. M., Maddox, D., Rava, P. S., Fitzgerald, T. J., Walsh, W., Oliveira, P., Rassaei, N., Baima, J. & Uy, K., May 14 2018, In : Frontiers in Oncology. 8, MAY, 146.

Research output: Contribution to journalArticle

3 Scopus citations

Total artificial heart implantation in a young Marfan syndrome patient

Rao, P., Keenan, J. B., Rajab, T. K., Kim, S. S., Smith, R., Amabile, O. & Khalpey, Z., Feb 1 2018, (Accepted/In press) In : International Journal of Artificial Organs.

Research output: Contribution to journalArticle

2 Scopus citations

Treatment Approaches and Outcomes for Primary Mediastinal Sarcoma: Analysis of 976 Patients

Engelhardt, K. E., DeCamp, M. M., Yang, A. D., Bilimoria, K. Y. & Odell, D. D., Aug 2018, In : Annals of Thoracic Surgery. 106, 2, p. 333-339 7 p.

Research output: Contribution to journalArticle

1 Scopus citations
8 Scopus citations

Utility of minimally invasive thoracoscopy for assessment of residual mediastinal lymphoma

Kane, L., Savas, H., DeCamp, M. M. & Bharat, A., Oct 2018, In : Surgery (United States). 164, 4, p. 825-830 6 p.

Research output: Contribution to journalArticle

2017

Achieving a 3-Star Society of Thoracic Surgery Lobectomy Ranking by Using Continuing Process Improvement, Lean Methodology, and Root Cause Analysis

Cerfolio, R. J., Minnich, D. J., Wei, B., Watson, C. & DeCamp, M. M., Feb 4 2017, In : Seminars in thoracic and cardiovascular surgery. 29, 4, p. 550-557 8 p.

Research output: Contribution to journalArticle

6 Scopus citations

Addressing the Digital Divide in Contemporary Biology: Lessons from Teaching UNIX

Mangul, S., Martin, L. S., Hoffmann, A., Pellegrini, M. & Eskin, E., Oct 2017, In : Trends in biotechnology. 35, 10, p. 901-903 3 p.

Research output: Contribution to journalComment/debate

6 Scopus citations

Anterior Mediastinal Myelolipoma

Mehta, C., Raparia, K. & Bharat, A., Jan 1 2017, In : Annals of Thoracic Surgery. 103, 1, p. e81

Research output: Contribution to journalArticle

1 Scopus citations

Aortoesophageal fistula resulting from aortic endograft migration

Fernandez, R., Malaisrie, S. C., Hoel, A. W. & Bharat, A., Sep 1 2017, In : Journal of Thoracic and Cardiovascular Surgery. 154, 3, p. 785-786.e1

Research output: Contribution to journalEditorial

6 Scopus citations

A rare diaphragmatic ureteral herniation case report: endoscopic and open reconstructive management

Lin, F. C., Lin, J. S., Kim, S. & Walker, J. R., Apr 5 2017, In : BMC Urology. 17, 1, 26.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

Association Between Resident Perceptions of Patient Safety and Duty Hour Violations

Matulewicz, R. S., Odell, D. D., Chung, J. W., Ban, K. A., Yang, A. D. & Bilimoria, K. Y., Feb 1 2017, In : Journal of the American College of Surgeons. 224, 2, p. 113-117.e4

Research output: Contribution to journalArticle

3 Scopus citations
4 Scopus citations

Changes in Tracheostomy- and Intubation-Related Tracheal Stenosis: Implications for Surgery

Kim, S. S., Khalpey, Z., Hsu, C. & Little, A. G., Sep 2017, In : Annals of Thoracic Surgery. 104, 3, p. 964-970 7 p.

Research output: Contribution to journalArticle

Open Access
11 Scopus citations

Cost-Effectiveness of a Bronchial Genomic Classifier for the Diagnostic Evaluation of Lung Cancer

Feller-Kopman, D., Liu, S., Geisler, B. P., DeCamp, M. M. & Pietzsch, J. B., Aug 2017, In : Journal of Thoracic Oncology. 12, 8, p. 1223-1232 10 p.

Research output: Contribution to journalArticle

3 Scopus citations

Decreased in-hospital mortality after lobectomy using video-assisted thoracoscopic surgery compared with open thoracotomy

Desai, H., Natt, B., Kim, S. S. & Bime, C., Feb 2017, In : Annals of the American Thoracic Society. 14, 2, p. 262-266 5 p.

Research output: Contribution to journalArticle

17 Scopus citations

Differences in Resident Perceptions by Postgraduate Year of Duty Hour Policies: An Analysis from the Flexibility in Duty Hour Requirements for Surgical Trainees (FIRST) Trial

Yang, A. D., Chung, J. W., Dahlke, A. R., Biester, T., Quinn, C. M., Matulewicz, R. S., Odell, D. D., Kelz, R. R., Shea, J. A., Lewis, F. & Bilimoria, K. Y., Feb 1 2017, In : Journal of the American College of Surgeons. 224, 2, p. 103-112 10 p.

Research output: Contribution to journalArticle

14 Scopus citations
3 Scopus citations

Donor pulmonary intravascular nonclassical monocytes recruit recipient neutrophils and mediate primary lung allograft dysfunction

Zheng, Z., Chiu, S., Akbarpour, M., Sun, H., Reyfman, P. A., Anekalla, K. R., Abdala-Valencia, H., Edgren, D., Li, W., Kreisel, D., Korobova, F. V., Fernandez, R., Mcquattie-Pimentel, A., Zhang, Z. J., Perlman, H., Misharin, A. V., Budinger, G. R. S. & Bharat, A., Jun 14 2017, In : Science translational medicine. 9, 394, 4508.

Research output: Contribution to journalArticle

19 Scopus citations

Downregulation of PKCζ/Pard3/Pard6b is responsible for lung adenocarcinoma cell EMT and invasion

Zhou, Q., Dai, J., Chen, T., Dada, L. A., Zhang, X., Zhang, W., DeCamp, M. M., Winn, R. A., Sznajder, J. I. & Zhou, G., Oct 2017, In : Cellular Signalling. 38, p. 49-59 11 p.

Research output: Contribution to journalArticle

9 Scopus citations

Dynamic landscape and regulation of RNA editing in mammals

GTEx Consortium, Oct 11 2017, In : Nature. 550, 7675, p. 249-254 6 p.

Research output: Contribution to journalArticle

Open Access
135 Scopus citations

Ethical considerations in the development of the flexibility in duty hour requirements for surgical trainees trial

Minami, C. A., Odell, D. D. & Bilimoria, K. Y., Jan 1 2017, In : JAMA surgery. 152, 1, p. 7-8 2 p.

Research output: Contribution to journalShort survey

7 Scopus citations

Experimental Modeling Supports a Role for MyBP-HL as a Novel Myofilament Component in Arrhythmia and Dilated Cardiomyopathy

Barefield, D. Y., Puckelwartz, M. J., Kim, E. Y., Wilsbacher, L. D., Vo, A. H., Waters, E. A., Earley, J. U., Hadhazy, M., Dellefave-Castillo, L., Pesce, L. L. & McNally, E. M., Oct 17 2017, In : Circulation. 136, 16, p. 1477-1491 15 p.

Research output: Contribution to journalArticle

14 Scopus citations

Genetic effects on gene expression across human tissues

GTEx Consortium, Oct 11 2017, In : Nature. 550, 7675, p. 204-213 10 p.

Research output: Contribution to journalArticle

814 Scopus citations

HapIso: An Accurate Method for the Haplotype-Specific Isoforms Reconstruction From Long Single-Molecule Reads

Mangul, S., Yang, T., Hormozdiari, F., Dainis, A. M., Tseng, E., Ashley, E. A., Zelikovsky, A. & Eskin, E., Mar 2017, In : IEEE Transactions on Nanobioscience. 16, 2, p. 108-115 8 p., 7880587.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

Hyperglycemia attenuates receptor activator of NF-κB ligand–induced macrophage activation by suppressing insulin signaling

Kurihara, C., Tanaka, T. & Yamanouchi, D., Jun 15 2017, In : Journal of Surgical Research. 214, p. 168-175 8 p.

Research output: Contribution to journalArticle

6 Scopus citations

Identifying the ubiquitination targets of E6AP by orthogonal ubiquitin transfer

Wang, Y., Liu, X., Zhou, L., Duong, D., Bhuripanyo, K., Zhao, B., Zhou, H., Liu, R., Bi, Y., Kiyokawa, H. & Yin, J., Dec 1 2017, In : Nature communications. 8, 1, 2232.

Research output: Contribution to journalArticle

6 Scopus citations

Immune Responses to Tissue-Restricted Nonmajor Histocompatibility Complex Antigens in Allograft Rejection

Bharat, A. & Mohanakumar, T., 2017, In : Journal of Immunology Research. 2017, 6312514.

Research output: Contribution to journalReview article

12 Scopus citations

Improving genetic diagnosis in Mendelian disease with transcriptome sequencing

Other members of the AWG, Genotype-Tissue Expression Consortium, National Institutes of Health (NIH) Common Fund, iospecimen Collection Source Site-National Disease Research Interchange, Biospecimen Collection Source Site-Roswell Park Cancer Institute, Biospecimen Core Resource-Van Andel Research Institute, Brain Bank Repository-University of Miami, Leidos Biomedical Project Management, Ethical, Legal, and Social Implications Study, Genome Browser Data Integration, and Visualization-European Bioinformatics Institute, Genome Browser Data Integration and Visualization-Genomics Institute, University of California, Santa Cruz:, LDACC-Analysis Working Group (AWG), Funded Statistical Methods groups-AWG, Enhancing GTEx funded Group, NIH/NHGRI, NIH/NCI, NIH/NIMH & NIH/NIDA, Apr 19 2017, In : Science translational medicine. 9, 386, eaal5209.

Research output: Contribution to journalArticle

171 Scopus citations

Intraoperative thermographic imaging to assess myocardial distribution of Del Nido cardioplegia

Rao, P., Keenan, J. B., Rajab, T. K., Ferng, A., Kim, S. S. & Khalpey, Z., Dec 1 2017, In : Journal of Cardiac Surgery. 32, 12, p. 812-815 4 p.

Research output: Contribution to journalArticle

7 Scopus citations

Landscape of X chromosome inactivation across human tissues

GTEx Consortium, Oct 11 2017, In : Nature. 550, 7675, p. 244-248 5 p.

Research output: Contribution to journalArticle

Open Access
141 Scopus citations

Left ventricular outflow tract closure during LVAD implantation: 2 cases of patients supported for over 6 years

Critsinelis, A., Kurihara, C., Kawabori, M., Sugiura, T., Civitello, A. B., Frazier, O. H. & Morgan, J. A., Dec 1 2017, In : Journal of Artificial Organs. 20, 4, p. 350-353 4 p.

Research output: Contribution to journalArticle

2 Scopus citations

Lobar necrosis from pulmonary embolism

Fernandez, R., Tomasko, J. M., Edgren, D. & Bharat, A., Mar 1 2017, In : American journal of respiratory and critical care medicine. 195, 5, p. 685-686 2 p.

Research output: Contribution to journalComment/debate

Long Single-Molecule Reads Can Resolve the Complexity of the Influenza Virus Composed of Rare, Closely Related Mutant Variants

Artyomenko, A., Wu, N. C., Mangul, S., Eskin, E., Sun, R. & Zelikovsky, A., Jun 2017, In : Journal of Computational Biology. 24, 6, p. 558-570 13 p.

Research output: Contribution to journalArticle

3 Scopus citations

Lung injury and loss of regulatory t cells primes for lung-restricted autoimmunity

Akbarpour, M. & Bharat, A., Jan 1 2017, In : Critical reviews in immunology. 37, 1, p. 23-37 15 p.

Research output: Contribution to journalReview article

2 Scopus citations

Measuring Error Identification and Recovery Skills in Surgical Residents

Sternbach, J. M., Wang, K., El Khoury, R., Teitelbaum, E. N. & Meyerson, S. L., Feb 1 2017, In : Annals of Thoracic Surgery. 103, 2, p. 663-669 7 p.

Research output: Contribution to journalArticle

1 Scopus citations

Mechanical circulatory support to bridge to a long-term continuous-flow left ventricular assist device as a bridge to heart transplantation

Kurihara, C., Dec 6 2017, Mechanical Circulatory Support for Advanced Heart Failure: A Texas Heart Institute/Baylor College of Medicine Approach. Springer International Publishing, p. 203-207 5 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Mobile intramural gastroesophageal junction mass

Kanter, J., Khan, F. & Bharat, A., Feb 1 2017, In : JAMA surgery. 152, 2, p. 201-202 2 p.

Research output: Contribution to journalReview article

Monocyte-derived alveolar macrophages drive lung fibrosis and persist in the lung over the life span

Misharin, A. V., Morales-Nebreda, L., Reyfman, P. A., Cuda, C. M., Walter, J. M., McQuattie-Pimentel, A. C., Chen, C. I., Anekalla, K. R., Joshi, N., Williams, K. J. N., Abdala-Valencia, H., Yacoub, T. J., Chi, M., Chiu, S., Gonzalez-Gonzalez, F. J., Gates, K., Lam, A. P., Nicholson, T. T., Homan, P. J., Soberanes, S. & 23 others, Dominguez, S., Morgan, V. K., Saber, R., Shaffer, A., Hinchcliff, M., Marshall, S. A., Bharat, A., Berdnikovs, S., Bhorade, S. M., Bartom, E. T., Morimoto, R. I., Balch, W. E., Sznajder, J. I., Chandel, N. S., Mutlu, G. M., Jain, M., Gottardi, C. J., Singer, B. D., Ridge, K. M., Bagheri, N., Shilatifard, A., Budinger, G. R. S. & Perlman, H., Aug 1 2017, In : Journal of Experimental Medicine. 214, 8, p. 2387-2404 18 p.

Research output: Contribution to journalArticle

203 Scopus citations

Nationwide Assessment of Robotic Lobectomy for Non-Small Cell Lung Cancer

Rajaram, R., Mohanty, S., Bentrem, D. J., Pavey, E. S., Odell, D. D., Bharat, A., Bilimoria, K. Y. & DeCamp, M. M., Apr 1 2017, In : Annals of Thoracic Surgery. 103, 4, p. 1092-1100 9 p.

Research output: Contribution to journalArticle

43 Scopus citations

Non-classical monocytes in tissue injury and cancer

Bharat, A., McQuattie-Pimentel, A. C. & Budinger, G. R. S., Jan 1 2017, In : Oncotarget. 8, 63, p. 106171-106172 2 p.

Research output: Contribution to journalEditorial

4 Scopus citations

Non-small cell lung cancer, version 5.2017: Clinical practice guidelines in oncology

Ettinger, D. S., Wood, D. E., Aisner, D. L., Akerley, W., Bauman, J., Chirieac, L. R., D'Amico, T. A., Decamp, M. M., Dilling, T. J., Dobelbower, M., Doebele, R. C., Govindan, R., Gubens, M. A., Hennon, M., Horn, L., Komaki, R., Lackner, R. P., Lanuti, M., Leal, T. A., Leisch, L. J. & 15 others, Lilenbaum, R., Lin, J., Loo, B. W., Martins, R., Otterson, G. A., Reckamp, K., Riely, G. J., Schild, S. E., Shapiro, T. A., Stevenson, J., Swanson, S. J., Tauer, K., Yang, S. C., Gregory, K. & Hughes, M., Apr 1 2017, In : JNCCN Journal of the National Comprehensive Cancer Network. 15, 4, p. 504-535 32 p.

Research output: Contribution to journalReview article

476 Scopus citations

Optimal local therapy for early-stage small cell lung cancer: Surgery needs a seat at the table

Engelhardt, K. E., Odell, D. D. & DeCamp, M. M., Oct 1 2017, In : Translational Cancer Research. 6, p. S1248-S1252

Research output: Contribution to journalEditorial

1 Scopus citations

Orientation to the Operating Room: An Introduction to the Surgery Clerkship for Third-Year Medical Students

Barnum, T. J., Salzman, D. H., Odell, D. D., Even, E., Reczynski, A., Corcoran, J. F. & Halverson, A. L., Nov 14 2017, In : MedEdPORTAL : the journal of teaching and learning resources. 13, 1 p.

Research output: Contribution to journalArticle

1 Scopus citations

Orthogonal ubiquitin transfer identifies ubiquitination substrates under differential control by the two ubiquitin activating enzymes

Liu, X., Zhao, B., Sun, L., Bhuripanyo, K., Wang, Y., Bi, Y., Davuluri, R. V., Duong, D. M., Nanavati, D., Yin, J. & Kiyokawa, H., Jan 30 2017, In : Nature communications. 8, 14286.

Research output: Contribution to journalArticle

19 Scopus citations

Perforation of a HeartMate II outflow graft

Kawabori, M., Kurihara, C., Cohn, W. E., Civitello, A. B., Frazier, O. H. & Morgan, J. A., Mar 1 2017, In : Journal of Cardiac Surgery. 32, 3, p. 233-234 2 p.

Research output: Contribution to journalArticle