Surgery, Thoracic Surgery Division

Research Output

2015

Risky business: Taking the stigma out of high-risk donation in lung transplantation

Bansal, S., Hayanga, J., Odell, J., Odell, D., Jeong, K., Fabio, A., Luketich, J. & D'Cunha, J., Nov 2015, In : Annals of Thoracic Surgery. 100, 5, p. 1787-1794 8 p.

Research output: Contribution to journalArticle

8 Scopus citations

The accuracy of computed tomography to predict completeness of pulmonary fissures: A prospective study

Kent, M. S., Ridge, C., O'Dell, D., Lo, P., Whyte, R. & Gangadharan, S. P., Jan 1 2015, In : Annals of the American Thoracic Society. 12, 5, p. 696-700 5 p.

Research output: Contribution to journalArticle

7 Scopus citations

Thoracic Inlet Syndrome

Bharat, A., Mckinnon, S. E. & Patterson, P. A., 2015, European Society of Thoracic Surgery Textbook of Thoracic Surgery. TBC: TBC

Research output: Chapter in Book/Report/Conference proceedingChapter

Training Assistants Improves the Process of Adoption of Video-Assisted Thoracic Surgery Lobectomy

Meyerson, S. L., Balderson, S. S. & D'Amico, T. A., Aug 1 2015, In : Annals of Thoracic Surgery. 100, 2, p. 401-406 6 p.

Research output: Contribution to journalArticle

3 Scopus citations

Unicentric Castleman’s disease presenting as a pulmonary mass: A diagnostic dilemma

Rawashdeh, B., Meyer, M., Yimin, D., Anthony, C., Nguyen, D., Moslemi, M., Golestani, S., Richard, S. & Kim, S., Apr 30 2015, In : American Journal of Case Reports. 16, p. 259-261 3 p.

Research output: Contribution to journalArticle

6 Scopus citations

Unusual presentation of a giant benign inflammatory polyp in the upper esophagus

Rawashdeh, B., Meyer, M., Gill, J., Moslemi, M. & Kim, S., 2015, In : International Journal of Surgery Case Reports. 6, p. 206-209 4 p.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

Zodiac: A Comprehensive Depiction of Genetic Interactions in Cancer by Integrating TCGA Data

Zhu, Y., Xu, Y., Helseth, D. L., Gulukota, K., Yang, S., Pesce, L. L., Mitra, R., Müller, P., Sengupta, S., Guo, W., Silverstein, J. C., Foster, I., Parsad, N., White, K. P. & Ji, Y., Aug 1 2015, In : Journal of the National Cancer Institute. 107, 8

Research output: Contribution to journalArticle

Open Access
19 Scopus citations
2014

Clinical characteristics and prediction of pulmonary hypertension in severe emphysema

Minai, O. A., Fessler, H., Stoller, J. K., Criner, G. J., Scharf, S. M., Meli, Y., Nutter, B. & DeCamp Jr, M. M., Mar 1 2014, In : Respiratory Medicine. 108, 3, p. 482-490 9 p.

Research output: Contribution to journalArticle

25 Scopus citations
36 Scopus citations

Defining the autonomy gap: When expectations do not meet reality in the operating room

Meyerson, S. L., Teitelbaum, E. N., George, B. C., Schuller, M. C., DaRosa, D. & Fryer, J. P., Jan 1 2014, In : Journal of Surgical Education. 71, 6, p. e64-e72

Research output: Contribution to journalArticle

57 Scopus citations

Deterministic regression algorithm for transcriptome frequency estimation

Caciula, A., Glebova, O., Artyomenko, A., Mangul, S., Lindsay, J., Məndoiu, I. I. & Zelikovsky, A., Jul 24 2014, 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2014. Institute of Electrical and Electronics Engineers Inc., 6863946. (2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Development and verification of a taxonomy of assessment metrics for surgical technical skills

Schmitz, C. C., Darosa, D., Sullivan, M. E., Meyerson, S., Yoshida, K. & Korndorffer, J. R., Jan 2014, In : Academic Medicine. 89, 1, p. 153-161 9 p.

Research output: Contribution to journalArticle

8 Scopus citations

Downregulation of Smurf2, a tumor-suppressive ubiquitin ligase, in triple-negative breast cancers: Involvement of the RB-microRNA axis

Liu, X., Gu, X., Sun, L., Flowers, A. B., Rademaker, A. W., Zhou, Y. & Kiyokawa, H., Feb 3 2014, In : BMC cancer. 14, 1, 57.

Research output: Contribution to journalArticle

26 Scopus citations

HOIL-1L functions as the PKCζ ubiquitin ligase to promote lung tumor growth

Queisser, M. A., Dada, L. A., Deiss-Yehiely, N., Angulo, M., Zhou, G., Kouri, F. M., Knab, L. M., Liu, J., Stegh, A. H., DeCamp, M. M., Budinger, G. R. S., Chandel, N. S., Ciechanover, A., Iwai, K. & Sznajder, J. I., Sep 15 2014, In : American journal of respiratory and critical care medicine. 190, 6, p. 688-698 11 p.

Research output: Contribution to journalArticle

18 Scopus citations

Immune response to tissue-restricted self-antigens induces airway inflammation and fibrosis following murine lung transplantation

Subramanian, V., Ramachandran, S., Banan, B., Bharat, A., Wang, X., Benshoff, N., Kreisel, D., Gelman, A. E. & Mohanakumar, T., Oct 1 2014, In : American Journal of Transplantation. 14, 10, p. 2359-2366 8 p.

Research output: Contribution to journalArticle

36 Scopus citations

Managing complications II: Conduit failure and conduit airway fistulas

Meyerson, S. L. & Mehta, C. K., Jan 1 2014, In : Journal of Thoracic Disease. 6, SUPPL.3

Research output: Contribution to journalReview article

11 Scopus citations

'N-of-1-pathways' unveils personal deregulated mechanisms from a single pair of RNA-seq samples: Towards precision medicine

Gardeux, V., Achour, I., Li, J., Maienschein-Cline, M., Li, H., Pesce, L., Parinandi, G., Bahroos, N., Winn, R., Foster, I., Garcia, J. G. N. & Lussier, Y. A., Jan 1 2014, In : Journal of the American Medical Informatics Association. 21, 6, p. 1015-1025 11 p.

Research output: Contribution to journalArticle

Open Access
24 Scopus citations

Novel external counterpulsation system, compact counterpulsation, was effective to treat severe ischemic heart failure: a case report

Kurihara, C., Nishimura, T., Sakano, Y. & Kyo, S., Jan 1 2014, In : Journal of Artificial Organs. 17, 3, p. 278-280 3 p.

Research output: Contribution to journalArticle

Perioperative blood transfusion affects hepatitis C virus (HCV)-specific immune responses and outcome following liver transplantation in HCV-infected patients

Subramanian, V., Bharat, A., Vachharajani, N., Crippin, J., Shenoy, S., Mohanakumar, T. & Chapman, W. C., Mar 2014, In : HPB. 16, 3, p. 282-294 13 p.

Research output: Contribution to journalArticle

5 Scopus citations

Reconstruction of influenza a virus variants from PacBio reads

Artyomenko, A., Mangul, S., Wu, N. C., Eskin, E., Sun, R. & Zelikovsky, A., Jul 24 2014, 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2014. Institute of Electrical and Electronics Engineers Inc., 6863935. (2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Reliability, validity, and feasibility of the zwisch scale for the assessment of intraoperative performance

George, B. C., Teitelbaum, E. N., Meyerson, S. L., Schuller, M. C., DaRosa, D., Petrusa, E. R., Petito, L. C. & Fryer, J. P., Nov 1 2014, In : Journal of Surgical Education. 71, 6, p. e90-e96

Research output: Contribution to journalArticle

113 Scopus citations

Robotic Lobectomy and the Principles of Technology Diffusion

McCarthy, D. P. & DeCamp, M. M., Dec 1 2014, In : CHEST. 146, 6, p. 1425-1426 2 p.

Research output: Contribution to journalEditorial

2 Scopus citations

Robotic training in cardiothoracic surgery

Poston, R., Gharagozloo, F., Khalpey, Z. & Kim, S. S., Jan 1 2014, In : Annals of Thoracic Surgery. 97, 1, 1 p.

Research output: Contribution to journalLetter

Sternalock plating system for elderly post-sternotomy patients

Nishimura, T., Kurihara, C., Sakano, Y. & Kyo, S., Jan 1 2014, In : Journal of Artificial Organs. 17, 3, p. 288-290 3 p.

Research output: Contribution to journalComment/debate

9 Scopus citations

Successful repair of benign left atriogastric fistula after transhiatal esophagectomy

Bharat, A., Damiano, R. & Patterson, G. A., Oct 1 2014, In : Annals of Thoracic Surgery. 98, 4, p. 1475-1477 3 p.

Research output: Contribution to journalArticle

2 Scopus citations

Surgery for small cell lung cancer

de Hoyos, A. & DeCamp, M. M., Jan 1 2014, In : Thoracic Surgery Clinics. 24, 4, p. 399-409 11 p.

Research output: Contribution to journalReview article

15 Scopus citations

Thoracic tumor effects on plasmatic coagulation: Role of hemeoxygenase-1

Nielsen, V. G., Gharagozloo, F., Matika, R. W., Kim, S. S., Zelman, E. A. & Steinbrenner, E. B., Feb 1 2014, In : Lung Cancer. 83, 2, p. 288-291 4 p.

Research output: Contribution to journalArticle

4 Scopus citations

Tissue-type plasminogen activator-induced fibrinolysis is enhanced in patients with breast, lung, pancreas and colon cancer

Nielsen, V. G., Matika, R. W., Ley, M. L. B., Waer, A. L., Gharagozloo, F., Kim, S. S., Nfonsam, V. N., Ong, E. S., Jie, T., Warneke, J. A. & Steinbrenner, E. B., Jan 1 2014, In : Blood Coagulation and Fibrinolysis. 25, 3, p. 248-253 6 p.

Research output: Contribution to journalArticle

6 Scopus citations

Transcriptome assembly and quantification from Ion Torrent RNA-Seq data

Mangul, S., Caciula, A., Al Seesi, S., Brinza, D., Măndoiu, I. & Zelikovsky, A., Jan 1 2014, In : BMC Genomics. 15, S7.

Research output: Contribution to journalArticle

Open Access
9 Scopus citations

VGA: A method for viral quasispecies assembly from ultra-deep sequencing data

Mangul, S., Wu, N. C., Mancuso, N., Zelikovsky, A., Sun, R. & Eskin, E., Jul 24 2014, 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2014. Institute of Electrical and Electronics Engineers Inc., 6863932. (2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Would screening for lung cancer benefit 75- to 84-year-old residents of the United States?

Varlotto, J. M., DeCamp, M. M., Flickinger, J. C., Lake, J., Recht, A., Belani, C. P., Reed, M. F., Toth, J. W., Mackley, H. B., Sciamanna, C. N., Lipton, A., Ali, S. M., Mahraj, R. P. M., Gilbert, C. R. & Yao, N., Jan 1 2014, In : Frontiers in Oncology. 4 MAR, Article 37.

Research output: Contribution to journalArticle

8 Scopus citations
2013

A theory-based model for teaching and assessing residents in the operating room

Darosa, D. A., Zwischenberger, J. B., Meyerson, S. L., George, B. C., Teitelbaum, E. N., Soper, N. J. & Fryer, J. P., Jan 1 2013, In : Journal of Surgical Education. 70, 1, p. 24-30 7 p.

Research output: Contribution to journalArticle

98 Scopus citations

Clinical value of serum CA19-9 as a prognostic factor for ampulla of Vater carcinoma

Kurihara, C., Yoshimi, F., Sasaki, K., Iijima, T., Kawasaki, H. & Nagai, H., Oct 1 2013, In : Hepato-Gastroenterology. 60, 127, p. 1588-1591 4 p.

Research output: Contribution to journalArticle

4 Scopus citations

Duration of faculty training needed to ensure reliable or performance ratings

George, B. C., Teitelbaum, E. N., DaRosa, D., Hungness, E., Meyerson, S. L., Fryer, J. P., Schuller, M. & Zwischenberger, J. B., Jan 1 2013, In : Journal of Surgical Education. 70, 6, p. 703-708 6 p.

Research output: Contribution to journalArticle

27 Scopus citations

Estimating sensitivity and specificity for technology assessment based on observer studies

Nishikawa, R. M. & Pesce, L. L., Jul 1 2013, In : Academic Radiology. 20, 7, p. 825-830 6 p.

Research output: Contribution to journalArticle

2 Scopus citations

Evaluation of the reliability of clinical staging of T2 N0 esophageal cancer: A review of the Society of Thoracic Surgeons database

Crabtree, T. D., Kosinski, A. S., Puri, V., Burfeind, W., Bharat, A., Patterson, G. A., Hofstetter, W. & Meyers, B. F., Aug 2013, In : Annals of Thoracic Surgery. 96, 2, p. 382-390 9 p.

Research output: Contribution to journalArticle

42 Scopus citations

Flexible approach for novel transcript reconstruction from RNA-seq data using maximum likelihood integer programming

Mangul, S., Caciula, A., Seesi, S. A., Brinza, D., Banday, A. R., Kanadia, R., Mandoiu, I. & Zelikovsky, A., Sep 13 2013, 5th International Conference on Bioinformatics and Computational Biology 2013, BICoB 2013. p. 25-33 9 p. (5th International Conference on Bioinformatics and Computational Biology 2013, BICoB 2013).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Identification of stage I non-small cell lung cancer patients at high risk for local recurrence following sublobar resection

Varlotto, J. M., Medford-Davis, L. N., Recht, A., Flickinger, J., Yao, N., Hess, C., Reed, M. F., Toth, J., Zander, D. S. & DeCamp Jr, M. M., Jan 1 2013, In : Chest. 143, 5, p. 1365-1377 13 p.

Research output: Contribution to journalArticle

21 Scopus citations

Impact of portal vein invasion and resection length in pancreatoduodenectomy on the survival rate of pancreatic head cancer

Kurihara, C., Yoshimi, F., Sasaki, K., Nakao, K., Iijima, T., Kawasaki, H. & Nagai, H., Oct 1 2013, In : Hepato-Gastroenterology. 60, 127, p. 1759-1765 7 p.

Research output: Contribution to journalArticle

7 Scopus citations

Interreader scoring variability in an observer study using dual-modality imaging for breast cancer detection in women with dense breasts

Drukker, K., Horsch, K. J., Pesce, L. L. & Giger, M. L., Jul 1 2013, In : Academic radiology. 20, 7, p. 847-853 7 p.

Research output: Contribution to journalArticle

12 Scopus citations

Large-scale modeling of epileptic seizures: Scaling properties of two parallel neuronal network simulation algorithms

Pesce, L. L., Lee, H. C., Hereld, M., Visser, S., Stevens, R. L., Wildeman, A. & Van Drongelen, W., 2013, In : Computational and Mathematical Methods in Medicine. 2013, 182145.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Locoregional recurrence of early-stage surgically resected non-small-cell lung cancer: The importance of close follow-up and consistent definitions

Varlotto, J., Recht, A., Medford-Davis, L. N., Flickinger, J. C. & DeCamp, M., Jun 2013, In : Annals of Oncology. 24, 6, p. 1711-1712 2 p.

Research output: Contribution to journalLetter

Lung transplant is a viable treatment option for patients with congenital and acquired pulmonary vein stenosis

Bharat, A., Epstein, D. J., Grady, M., Faro, A., Michelson, P., Sweet, S. C. & Huddleston, C. B., Jun 1 2013, In : Journal of Heart and Lung Transplantation. 32, 6, p. 621-625 5 p.

Research output: Contribution to journalArticle

20 Scopus citations

Matched-pair and propensity score comparisons of outcomes of patients with clinical stage i non-small cell lung cancer treated with resection or stereotactic radiosurgery

Varlotto, J., Fakiris, A., Flickinger, J., Medford-Davis, L., Liss, A., Shelkey, J., Belani, C., Deluca, J., Recht, A., Maheshwari, N., Barriger, R., Yao, N. & Decamp, M., Aug 1 2013, In : Cancer. 119, 15, p. 2683-2691 9 p.

Research output: Contribution to journalArticle

75 Scopus citations

Merits of cadaveric lobar lung transplantation

Bharat, A. & Alexander Patterson, G., Jun 1 2013, In : European Journal of Cardio-thoracic Surgery. 43, 6, p. 1225-1226 2 p., ezs595.

Research output: Contribution to journalComment/debate

1 Scopus citations

Molecular profiling in non-small cell lung cancer: A step toward personalized medicine

Raparia, K., Villa, C., DeCamp, M. M., Patel, J. D. & Mehta, M. P., Apr 1 2013, In : Archives of Pathology and Laboratory Medicine. 137, 4, p. 481-491 11 p.

Research output: Contribution to journalReview article

29 Scopus citations

Monte-Carlo Regression algorithm for isoform frequency estimation from RNA-Seq data

Caciula, A., Zelikovsky, A., Mangul, S., Lindsay, J. & Mandoiu, I., Dec 9 2013, 2013 IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2013. 6629228. (2013 IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2013).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Prospective phase II trial of preresection thoracoscopic mediastinal restaging after neoadjuvant therapy for IIIA (N2) non-small cell lung cancer: Results of CALGB Protocol 39803

Jaklitsch, M. T., Gu, L., Demmy, T., Harpole, D. H., D'Amico, T. A., McKenna, R. J., Krasna, M. J., Kohman, L. J., Swanson, S. J., Decamp, M. M., Wang, X., Barry, S. & Sugarbaker, D. J., Jul 1 2013, In : Journal of Thoracic and Cardiovascular Surgery. 146, 1, p. 9-16 8 p.

Research output: Contribution to journalArticle

17 Scopus citations

Receiver-operating characteristic curves for somatic cell scores and California mastitis test in Valle del Belice dairy sheep

Riggio, V., Pesce, L. L., Morreale, S. & Portolano, B., Jun 1 2013, In : Veterinary Journal. 196, 3, p. 528-532 5 p.

Research output: Contribution to journalArticle

8 Scopus citations

Sternal fracture: isolated lesion versus polytrauma from associated extrasternal injuries--analysis of 1,867 cases.

Odell, D. D., Peleg, K., Givon, A., Radomislensky, I., Makey, I., Decamp, M. M., Whyte, R., Gangadharan, S. P., Berger, R. L. & Israeli Trauma Group, T. G., Sep 2013, In : The journal of trauma and acute care surgery. 75, 3, p. 448-452 5 p.

Research output: Contribution to journalArticle

13 Scopus citations