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Research Output

2020
Open Access

Fine particle transport dynamics in response to wood additions in a small agricultural stream

Drummond, J., Wright-Stow, A., Franklin, P., Quinn, J. & Packman, A., 2020, (Accepted/In press) In : Hydrological Processes. 34, 21, p. 4128-4138 11 p.

Research output: Contribution to journalArticle

Open Access

Fine Sediment Deposition and Filtration Under Losing and Gaining Flow Conditions: A Particle Tracking Model Approach

Preziosi-Ribero, A., Packman, A. I., Escobar-Vargas, J. A., Phillips, C. B., Donado, L. D. & Arnon, S., Feb 1 2020, In : Water Resources Research. 56, 2, e2019WR026057.

Research output: Contribution to journalArticle

1 Scopus citations

Impacts of Suspended Clay Particle Deposition on Sand-Bed Morphodynamics

Dallmann, J., Phillips, C. B., Teitelbaum, Y., Sund, N., Schumer, R., Arnon, S. & Packman, A. I., Aug 1 2020, In : Water Resources Research. 56, 8, e2019WR027010.

Research output: Contribution to journalArticle

Knowledge, attitudes, intentions, and behavior related to green infrastructure for flood management: A systematic literature review

Venkataramanan, V., Lopez, D., McCuskey, D. J., Kiefus, D., McDonald, R. I., Miller, W. M., Packman, A. I. & Young, S. L., Jun 10 2020, In : Science of the Total Environment. 720, 137606.

Research output: Contribution to journalReview article

2 Scopus citations

Rethinking wastewater risks and monitoring in light of the COVID-19 pandemic

Bogler, A., Packman, A., Furman, A., Gross, A., Kushmaro, A., Ronen, A., Dagot, C., Hill, C., Vaizel-Ohayon, D., Morgenroth, E., Bertuzzo, E., Wells, G., Kiperwas, H. R., Horn, H., Negev, I., Zucker, I., Bar-Or, I., Moran-Gilad, J., Balcazar, J. L., Bibby, K. & 15 others, Elimelech, M., Weisbrod, N., Nir, O., Sued, O., Gillor, O., Alvarez, P. J., Crameri, S., Arnon, S., Walker, S., Yaron, S., Nguyen, T. H., Berchenko, Y., Hu, Y., Ronen, Z. & Bar-Zeev, E., 2020, (Accepted/In press) In : Nature Sustainability.

Research output: Contribution to journalReview article

Open Access

Soil hydrology drives ecological niche differentiation in a native prairie microbiome

Griffin, J. S., Haug, L. A., Rivera, V. A., Hernandez Gonzalez, L. M., Kelly, J. J., Miller, W. M., Wells, G. F. & Packman, A. I., Feb 1 2020, In : FEMS microbiology ecology. 96, 1, fiz163.

Research output: Contribution to journalArticle

1 Scopus citations
2019

A Dual Domain stochastic lagrangian model for predicting transport in open channels with hyporheic exchange

Sherman, T., Roche, K. R., Richter, D. H., Packman, A. I. & Bolster, D., Mar 2019, In : Advances in Water Resources. 125, p. 57-67 11 p.

Research output: Contribution to journalArticle

5 Scopus citations

A miniaturized testing apparatus to study the chemo-mechanics of porous media

Cil, M. B., Schabelski, J., Packman, A. & Buscarnera, G., Aug 22 2019, In : Geotechnical Testing Journal. 43, 4, GTJ20190031.

Research output: Contribution to journalArticle

1 Scopus citations

A multiscale statistical method to identify potential areas of hyporheic exchange for river restoration planning

Magliozzi, C., Coro, G., Grabowski, R. C., Packman, A. I. & Krause, S., Jan 2019, In : Environmental Modelling and Software. p. 311-323 13 p.

Research output: Contribution to journalArticle

6 Scopus citations

A systematic review of the human health and social well-being outcomes of green infrastructure for stormwater and flood management

Venkataramanan, V., Packman, A. I., Peters, D. R., Lopez, D., McCuskey, D. J., McDonald, R. I., Miller, W. M. & Young, S. L., Sep 15 2019, In : Journal of Environmental Management. 246, p. 868-880 13 p.

Research output: Contribution to journalReview article

13 Scopus citations

Characterization of soil profiles and elemental concentrations reveals deposition of heavy metals and phosphorus in a Chicago-area nature preserve, Gensburg Markham Prairie

Hernandez Gonzalez, L. M., Rivera, V. A., Phillips, C. B., Haug, L. A., Hatch, S. L., Yeager, L. E., Chang, H., Alvarez, J., Gnaedinger, K. J., Miller, W. M. & Packman, A. I., Nov 1 2019, In : Journal of Soils and Sediments. 19, 11, p. 3817-3831 15 p.

Research output: Contribution to journalArticle

2 Scopus citations

Co-located contemporaneous mapping of morphological, hydrological, chemical, and biological conditions in a 5th-order mountain stream network, Oregon, USA

Ward, A. S., Zarnetske, J. P., Baranov, V., Blaen, P. J., Brekenfeld, N., Chu, R., Derelle, R., Drummond, J., Fleckenstein, J. H., Garayburu-Caruso, V., Graham, E., Hannah, D., Harman, C. J., Herzog, S., Hixson, J., Knapp, J. L. A., Krause, S., Kurz, M. J., Lewandowski, J., Li, A. & 17 others, Marti, E., Miller, M., Milner, A. M., Neil, K., Orsini, L., Packman, A. I., Plont, S., Renteria, L., Roche, K., Royer, T., Schmadel, N. M., Segura, C., Stegen, J., Toyoda, J., Wells, J., Wisnoski, N. I. & Wondzell, S. M., Oct 22 2019, In : Earth System Science Data. 11, 4, p. 1567-1581 15 p.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Ecological and Genomic Attributes of Novel Bacterial Taxa That Thrive in Subsurface Soil Horizons

Brewer, T. E., Aronson, E. L., Arogyaswamy, K., Billings, S. A., Botthoff, J. K., Campbell, A. N., Dove, N. C., Fairbanks, D., Gallery, R. E., Hart, S. C., Kaye, J., King, G., Logan, G., Lohse, K. A., Maltz, M. R., Mayorga, E., O'Neill, C., Owens, S. M., Packman, A., Pett-Ridge, J. & 5 others, Plante, A. F., Richter, D. D., Silver, W. L., Yang, W. H. & Fierer, N., Oct 1 2019, In : mBio. 10, 5, e01318-19.

Research output: Contribution to journalArticle

Open Access
9 Scopus citations

Effects of resuspension on the mobility and chemical speciation of zinc in contaminated sediments

Xie, M., Alsina, M. A., Yuen, J., Packman, A. I. & Gaillard, J. F., Feb 15 2019, In : Journal of Hazardous Materials. 364, p. 300-308 9 p.

Research output: Contribution to journalArticle

9 Scopus citations

Effects of Turbulent Hyporheic Mixing on Reach-Scale Transport

Roche, K. R., Li, A., Bolster, D., Wagner, G. J. & Packman, A. I., May 2019, In : Water Resources Research. 55, 5, p. 3780-3795 16 p.

Research output: Contribution to journalArticle

5 Scopus citations

Effects of vertical hydrodynamic mixing on photomineralization of dissolved organic carbon in arctic surface waters

Li, A., Aubeneau, A. F., King, T., Cory, R. M., Neilson, B. T., Bolster, D. & Packman, A. I., Apr 2019, In : Environmental Science: Processes and Impacts. 21, 4, p. 748-760 13 p.

Research output: Contribution to journalArticle

4 Scopus citations

Fine-Particle Deposition, Retention, and Resuspension Within a Sand-Bedded Stream Are Determined by Streambed Morphodynamics

Phillips, C. B., Dallmann, J. D., Jerolmack, D. J. & Packman, A. I., Dec 1 2019, In : Water Resources Research. 55, 12, p. 10303-10318 16 p.

Research output: Contribution to journalArticle

1 Scopus citations

Improving Predictions of Fine Particle Immobilization in Streams

Drummond, J., Schmadel, N., Kelleher, C., Packman, A. & Ward, A., Dec 16 2019, In : Geophysical Research Letters. 46, 23, p. 13853-13861 9 p.

Research output: Contribution to journalArticle

1 Scopus citations

Large eddy simulation of turbulent flow over and through a rough permeable bed

Lian, Y. P., Dallmann, J., Sonin, B., Roche, K. R., Liu, W. K., Packman, A. & Wagner, G. J., Feb 15 2019, In : Computers and Fluids. 180, p. 128-138 11 p.

Research output: Contribution to journalArticle

4 Scopus citations
6 Scopus citations

Solute transport and transformation in an intermittent, headwater mountain stream with diurnal discharge fluctuations

Ward, A. S., Kurz, M. J., Schmadel, N. M., Knapp, J. L. A., Blaen, P. J., Harman, C. J., Drummond, J. D., Hannah, D. M., Krause, S., Li, A., Marti, E., Milner, A., Miller, M., Neil, K., Plont, S., Packman, A. I., Wisnoski, N. I., Wondzell, S. M. & Zarnetske, J. P., Nov 1 2019, In : Water (Switzerland). 11, 11, 2208.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Spatial and temporal variation in river corridor exchange across a 5th-order mountain stream network

Ward, A. S., Wondzell, S. M., Schmadel, N. M., Herzog, S., Zarnetske, J. P., Baranov, V., Blaen, P. J., Brekenfeld, N., Chu, R., Derelle, R., Drummond, J., Fleckenstein, J. H., Garayburu-Caruso, V., Graham, E., Hannah, D., Harman, C. J., Hixson, J., Knapp, J. L. A., Krause, S., Kurz, M. J. & 17 others, Lewandowski, J., Li, A., Martí, E., Miller, M., Milner, A. M., Neil, K., Orsini, L., Packman, A. I., Plont, S., Renteria, L., Roche, K., Royer, T., Segura, C., Stegen, J., Toyoda, J., Wells, J. & Wisnoski, N. I., Dec 20 2019, In : Hydrology and Earth System Sciences. 23, 12, p. 5199-5225 27 p.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Towards mechanical characterization of granular biofilms by optical coherence elastography measurements of circumferential elastic waves

Liou, H. C., Sabba, F., Packman, A. I., Rosenthal, A., Wells, G. & Balogun, O., Jan 1 2019, In : Soft Matter. 15, 28, p. 5562-5573 12 p.

Research output: Contribution to journalArticle

2 Scopus citations
2018

Cape Town's "Day Zero" is a bellwether of global water crises

Packman, A., Feb 23 2018, In : Axios.

Research output: Contribution to journalArticle

Comparison of biofilm cell quantification methods for drinking water distribution systems

Waller, S. A., Packman, A. I. & Hausner, M., Jan 2018, In : Journal of Microbiological Methods. 144, p. 8-21 14 p.

Research output: Contribution to journalArticle

7 Scopus citations

Cooling water use in thermoelectric power generation and its associated challenges for addressing water-energy nexus

Pan, S. -Y., Snyder, S. W., Packman, A., Lin, Y. J. & Chiang, P., Apr 11 2018, In : Water-Energy Nexus. 1, 1

Research output: Contribution to journalArticle

Open Access

Cryptosporidium oocyst persistence in agricultural streams -a mobile-immobile model framework assessment

Drummond, J. D., Boano, F., Atwill, E. R., Li, X., Harter, T. & Packman, A. I., Dec 1 2018, In : Scientific reports. 8, 1, 4603.

Research output: Contribution to journalArticle

2 Scopus citations

Interactions Between Suspended Kaolinite Deposition and Hyporheic Exchange Flux Under Losing and Gaining Flow Conditions

Fox, A., Packman, A. I., Boano, F., Phillips, C. B. & Arnon, S., May 16 2018, In : Geophysical Research Letters. 45, 9, p. 4077-4085 9 p.

Research output: Contribution to journalArticle

13 Scopus citations

Interplay between flow and bioturbation enhances metal efflux from low-permeability sediments

Xie, M., Wang, N., Gaillard, J. F. & Packman, A. I., 2018, In : Journal of Hazardous Materials. 341, p. 304-312 9 p.

Research output: Contribution to journalArticle

10 Scopus citations

Less Fine Particle Retention in a Restored Versus Unrestored Urban Stream: Balance Between Hyporheic Exchange, Resuspension, and Immobilization

Drummond, J. D., Larsen, L. G., González-Pinzón, R., Packman, A. I. & Harvey, J. W., Apr 2018, In : Journal of Geophysical Research: Biogeosciences. 123, 4, p. 1425-1439 15 p.

Research output: Contribution to journalArticle

7 Scopus citations

Morphological analysis of pore size and connectivity in a thick mixed-culture biofilm

Rosenthal, A. F., Griffin, J. S., Wagner, M., Packman, A. I., Balogun, O. & Wells, G. F., Sep 2018, In : Biotechnology and Bioengineering. 115, 9, p. 2268-2279 12 p.

Research output: Contribution to journalArticle

5 Scopus citations

The Need for an Integrated Land-Lake-Atmosphere Modeling System, Exemplified by North America's Great Lakes Region

Sharma, A., Hamlet, A. F., Fernando, H. J. S., Catlett, C. E., Horton, D. E., Kotamarthi, V. R., Kristovich, D. A. R., Packman, A. I., Tank, J. L. & Wuebbles, D. J., Oct 2018, In : Earth's Future. 6, 10, p. 1366-1379 14 p.

Research output: Contribution to journalComment/debate

10 Scopus citations

Toward a conceptual framework of hyporheic exchange across spatial scales

Magliozzi, C., Grabowski, R. C., Packman, A. I. & Krause, S., 2018, In : Hydrology and Earth System Sciences. 22, 12, p. 6163-6185 23 p.

Research output: Contribution to journalArticle

10 Scopus citations

Turbulence Links Momentum and Solute Exchange in Coarse-Grained Streambeds

Roche, K. R., Blois, G., Best, J. L., Christensen, K. T., Aubeneau, A. F. & Packman, A. I., May 2018, In : Water Resources Research. 54, 5, p. 3225-3242 18 p.

Research output: Contribution to journalArticle

14 Scopus citations
2017

A Process-Based Model for Bioturbation-Induced Mixing

Aquino, T., Roche, K. R., Aubeneau, A., Packman, A. & Bolster, D., Dec 1 2017, In : Scientific Reports. 7, 1, 14287.

Research output: Contribution to journalArticle

3 Scopus citations

Benthic biofilm controls on fine particle dynamics in streams

Roche, K. R., Drummond, J. D., Boano, F., Packman, A. I., Battin, T. J. & Hunter, W. R., Jan 1 2017, In : Water Resources Research. 53, 1, p. 222-236 15 p.

Research output: Contribution to journalArticle

11 Scopus citations

Biofilm-induced bioclogging produces sharp interfaces in hyporheic flow, redox conditions, and microbial community structure

Caruso, A., Boano, F., Ridolfi, L., Chopp, D. L. & Packman, A., May 28 2017, In : Geophysical Research Letters. 44, 10, p. 4917-4925 9 p.

Research output: Contribution to journalArticle

20 Scopus citations

Covariation in patterns of turbulence-driven hyporheic flow and denitrification enhances reach-scale nitrogen removal

Li, A., Aubeneau, A. F., Bolster, D., Tank, J. L. & Packman, A. I., Aug 2017, In : Water Resources Research. 53, 8, p. 6927-6944 18 p.

Research output: Contribution to journalArticle

13 Scopus citations

Fine particle retention within stream storage areas at base flow and in response to a storm event

Drummond, J. D., Larsen, L. G., González-Pinzón, R., Packman, A. I. & Harvey, J. W., Jul 2017, In : Water Resources Research. 53, 7, p. 5690-5705 16 p.

Research output: Contribution to journalArticle

14 Scopus citations

FracFit: A robust parameter estimation tool for fractional calculus models

Kelly, J. F., Bolster, D., Meerschaert, M. M., Drummond, J. D. & Packman, A. I., Mar 1 2017, In : Water Resources Research. 53, 3, p. 2559-2567 9 p.

Research output: Contribution to journalArticle

24 Scopus citations

Microbial diversity in an intensively managed landscape is structured by landscape connectivity

Griffin, J. S., Lu, N., Sangwan, N., Li, A., Dsouza, M., Stumpf, A. J., Sevilla, T., Culotti, A., Keefer, L. L., Kelly, J. J., Gilbert, J. A., Wells, G. F. & Packman, A. I., Oct 1 2017, In : FEMS microbiology ecology. 93, 10, fix120.

Research output: Contribution to journalArticle

8 Scopus citations

Nitrosomonas europaea biofilm formation is enhanced by Pseudomonas aeruginosa

Petrovich, M., Wu, C. Y., Rosenthal, A., Chen, K. F., Packman, A. I. & Wells, G. F., Jan 1 2017, In : FEMS microbiology ecology. 93, 5, fix047.

Research output: Contribution to journalArticle

7 Scopus citations

Solute mixing regulates heterogeneity of mineral precipitation in porous media

Cil, M. B., Xie, M., Packman, A. I. & Buscarnera, G., Jul 16 2017, In : Geophysical Research Letters. 44, 13, p. 6658-6666 9 p.

Research output: Contribution to journalArticle

6 Scopus citations
2016

An Integrated Experimental and Modeling Approach to Predict Sediment Mixing from Benthic Burrowing Behavior

Roche, K. R., Aubeneau, A. F., Xie, M., Aquino, T., Bolster, D. & Packman, A. I., Sep 20 2016, In : Environmental Science and Technology. 50, 18, p. 10047-10054 8 p.

Research output: Contribution to journalArticle

6 Scopus citations

Biomineralization strongly modulates the formation of Proteus mirabilis and Pseudomonas aeruginosa dual-species biofilms

Li, X., Lu, N., Brady, H. R. & Packman, A. I., Jan 1 2016, In : FEMS microbiology ecology. 92, 12, fiw189.

Research output: Contribution to journalArticle

5 Scopus citations

DigitalCrust - a 4D data system of material properties for transforming research on crustal fluid flow

Fan, Y., Richard, S., Sky Bristol, R., Peters, S. E., Ingebritsen, S. E., Moosdorf, N., Packman, A., Gleeson, T., Zaslavsky, I., Peckham, S., Murdoch, L., Fienen, M., Cardiff, M., Tarboton, D., Jones, N., Hooper, R., Arrigo, J., Gochis, D., Olson, J. & Wolock, D., Oct 31 2016, Crustal Permeability. wiley, p. 6-12 7 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Hydrodynamic Forcing Mobilizes Cu in Low-Permeability Estuarine Sediments

Xie, M., Wang, N., Gaillard, J. F. & Packman, A. I., May 3 2016, In : Environmental Science and Technology. 50, 9, p. 4615-4623 9 p.

Research output: Contribution to journalArticle

9 Scopus citations

In situ biomineralization and particle deposition distinctively mediate biofilm susceptibility to chlorine

Li, X., Chopp, D. L., Russin, W. A., Brannon, P. T., Parsek, M. R. & Packman, A. I., May 1 2016, In : Applied and Environmental Microbiology. 82, 10, p. 2886-2892 7 p.

Research output: Contribution to journalArticle

12 Scopus citations

The ecology and biogeochemistry of stream biofilms

Battin, T. J., Besemer, K., Bengtsson, M. M., Romani, A. M. & Packmann, A. I., Mar 14 2016, In : Nature Reviews Microbiology. 14, 4, p. 251-263 13 p.

Research output: Contribution to journalReview article

289 Scopus citations