• 1609 Citations
20032020

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2020

A genomic integration platform for heterologous cargo encapsulation in 1,2-propanediol utilization bacterial microcompartments

Nichols, T. M., Kennedy, N. W. & Tullman-Ercek, D., Apr 15 2020, In : Biochemical Engineering Journal. 156, 107496.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Apparent size and morphology of bacterial microcompartments varies with technique

Kennedy, N. W., Hershewe, J. M., Nichols, T. M., Roth, E. W., Wilke, C. D., Mills, C. E., Jewett, M. C. & Tullman-Ercek, D., 2020, In : PloS one. 15, 3, e0226395.

Research output: Contribution to journalArticle

Open Access

Multiplexed mass spectrometry of individual ions improves measurement of proteoforms and their complexes

Kafader, J. O., Melani, R. D., Durbin, K. R., Ikwuagwu, B., Early, B. P., Fellers, R. T., Beu, S. C., Zabrouskov, V., Makarov, A. A., Maze, J. T., Shinholt, D. L., Yip, P. F., Tullman-Ercek, D., Senko, M. W., Compton, P. D. & Kelleher, N. L., Apr 1 2020, In : Nature Methods. 17, 4, p. 391-394 4 p.

Research output: Contribution to journalArticle

4 Scopus citations
2019

Experimental Evaluation of Coevolution in a Self-Assembling Particle

Hartman, E. C., Lobba, M. J., Favor, A. H., Robinson, S. A., Francis, M. B. & Tullman-Ercek, D., Mar 19 2019, In : Biochemistry. 58, 11, p. 1527-1538 12 p.

Research output: Contribution to journalArticle

3 Scopus citations

Systematic Engineering of a Protein Nanocage for High-Yield, Site-Specific Modification

Brauer, D. D., Hartman, E. C., Bader, D. L. V., Merz, Z. N., Tullman-Ercek, D. & Francis, M. B., Mar 6 2019, In : Journal of the American Chemical Society. 141, 9, p. 3875-3884 10 p.

Research output: Contribution to journalArticle

6 Scopus citations
2018

A Pseudomonas putida efflux pump acts on short-chain alcohols

Basler, G., Thompson, M., Tullman-Ercek, D. & Keasling, J., May 11 2018, In : Biotechnology for Biofuels. 11, 1, 136.

Research output: Contribution to journalArticle

12 Scopus citations

Evolutionary engineering improves tolerance for medium-chain alcohols in Saccharomyces cerevisiae

Davis López, S. A., Griffith, D. A., Choi, B., Cate, J. H. D. & Tullman-Ercek, D., Apr 2 2018, In : Biotechnology for Biofuels. 11, 1, 90.

Research output: Contribution to journalArticle

2 Scopus citations

Quantitative characterization of all single amino acid variants of a viral capsid-based drug delivery vehicle

Hartman, E. C., Jakobson, C. M., Favor, A. H., Lobba, M. J., Álvarez-Benedicto, E., Francis, M. B. & Tullman-Ercek, D., Dec 1 2018, In : Nature communications. 9, 1, 1385.

Research output: Contribution to journalArticle

12 Scopus citations

Spatially organizing biochemistry: Choosing a strategy to translate synthetic biology to the factory

Jakobson, C. M., Tullman-Ercek, D. & Mangan, N. M., Dec 1 2018, In : Scientific reports. 8, 1, 8196.

Research output: Contribution to journalArticle

5 Scopus citations
2017

A Secretion-Amplification Role for Salmonella enterica Translocon Protein SipD

Glasgow, A. A., Wong, H. T. & Tullman-Ercek, D., Jun 16 2017, In : ACS synthetic biology. 6, 6, p. 1006-1015 10 p.

Research output: Contribution to journalArticle

5 Scopus citations
22 Scopus citations

De novo design of signal sequences to localize cargo to the 1,2-propanediol utilization microcompartment

Jakobson, C. M., Slininger Lee, M. F. & Tullman-Ercek, D., May 1 2017, In : Protein Science. 26, 5, p. 1086-1092 7 p.

Research output: Contribution to journalArticle

19 Scopus citations

Evidence for Improved Encapsulated Pathway Behavior in a Bacterial Microcompartment through Shell Protein Engineering

Slininger Lee, M. F., Jakobson, C. M. & Tullman-Ercek, D., Oct 20 2017, In : ACS synthetic biology. 6, 10, p. 1880-1891 12 p.

Research output: Contribution to journalArticle

25 Scopus citations
2016

A Selection for Assembly Reveals That a Single Amino Acid Mutant of the Bacteriophage MS2 Coat Protein Forms a Smaller Virus-like Particle

Asensio, M. A., Morella, N. M., Jakobson, C. M., Hartman, E. C., Glasgow, J. E., Sankaran, B., Zwart, P. H. & Tullman-Ercek, D., Sep 14 2016, In : Nano letters. 16, 9, p. 5944-5950 7 p.

Research output: Contribution to journalArticle

13 Scopus citations

Proteins adopt functionally active conformations after type III secretion

Metcalf, K. J., Bevington, J. L., Rosales, S. L., Burdette, L. A., Valdivia, E. & Tullman-Ercek, D., Dec 23 2016, In : Microbial Cell Factories. 15, 1, 213.

Research output: Contribution to journalArticle

4 Scopus citations

Transcriptional feedback regulation of efflux protein expression for increased tolerance to and production of n-butanol

Boyarskiy, S., Davis López, S., Kong, N. & Tullman-Ercek, D., Jan 1 2016, In : Metabolic Engineering. 33, p. 130-137 8 p.

Research output: Contribution to journalArticle

27 Scopus citations

Tuning the Catalytic Activity of Subcellular Nanoreactors

Jakobson, C. M., Chen, Y., Slininger, M. F., Valdivia, E., Kim, E. Y. & Tullman-Ercek, D., Jul 31 2016, In : Journal of Molecular Biology. 428, 15, p. 2989-2996 8 p.

Research output: Contribution to journalArticle

15 Scopus citations

Type III secretion as a generalizable strategy for the production of full-length biopolymer-forming proteins

Azam, A., Li, C., Metcalf, K. J. & Tullman-Ercek, D., Nov 1 2016, In : Biotechnology and Bioengineering. 113, 11, p. 2313-2320 8 p.

Research output: Contribution to journalArticle

15 Scopus citations

Type-III secretion filaments as scaffolds for inorganic nanostructures

Azam, A. & Tullman-Ercek, D., Jan 1 2016, In : Journal of the Royal Society Interface. 13, 114, 20150938.

Research output: Contribution to journalArticle

4 Scopus citations
2015

Influence of Electrostatics on Small Molecule Flux through a Protein Nanoreactor

Glasgow, J. E., Asensio, M. A., Jakobson, C. M., Francis, M. B. & Tullman-Ercek, D., Sep 18 2015, In : ACS synthetic biology. 4, 9, p. 1011-1019 9 p.

Research output: Contribution to journalArticle

27 Scopus citations

Localization of proteins to the 1,2-propanediol utilization microcompartment by non-native signal sequences is mediated by a common hydrophobic motif

Jakobson, C. M., Kim, E. Y., Slininger, M. F., Chien, A. & Tullman-Ercek, D., Oct 2 2015, In : Journal of Biological Chemistry. 290, 40, p. 24519-24533 15 p.

Research output: Contribution to journalArticle

28 Scopus citations
2014
27 Scopus citations

Engineering transcriptional regulation to control Pdu microcompartment formation

Kim, E. Y., Jakobson, C. M. & Tullman-Ercek, D., Nov 26 2014, In : PloS one. 9, 11, e113814.

Research output: Contribution to journalArticle

13 Scopus citations

Enhancing tolerance to short-chain alcohols by engineering the Escherichia coli AcrB efflux pump to secrete the non-native substrate n-butanol

Fisher, M. A., Boyarskiy, S., Yamada, M. R., Kong, N., Bauer, S. & Tullman-Ercek, D., Jan 17 2014, In : ACS synthetic biology. 3, 1, p. 30-40 11 p.

Research output: Contribution to journalArticle

59 Scopus citations

The effects of time, temperature, and pH on the stability of PDU bacterial microcompartments

Kim, E. Y., Slininger, M. F. & Tullman-Ercek, D., Oct 1 2014, In : Protein Science. 23, 10, p. 1434-1441 8 p.

Research output: Contribution to journalArticle

10 Scopus citations

Using transcriptional control to increase titers of secreted heterologous proteins by the type III secretion system

Metcalf, K. J., Tullman-Ercek, D., Azam, A., Valdivia, E. & Metcalf, K. J., 2014, In : Applied and Environmental Microbiology. 80, 19, p. 5927-5934 8 p.

Research output: Contribution to journalArticle

13 Scopus citations
2013

Addition of a carbohydrate-binding module enhances cellulase penetration into cellulose substrates

Reyes-Ortiz, V., Heins, R. A., Cheng, G., Kim, E. Y., Vernon, B. C., Elandt, R. B., Adams, P. D., Sale, K. L., Hadi, M. Z., Simmons, B. A., Kent, M. S. & Tullman-Ercek, D., 2013, In : Biotechnology for Biofuels. 6, 1, 93.

Research output: Contribution to journalArticle

39 Scopus citations

An assay for the bacterial sweet spot

Tullman-Ercek, D., Dec 1 2013, In : Biotechnology Journal. 8, 12, p. 1377-1378 2 p.

Research output: Contribution to journalArticle

2012

Osmolyte-mediated encapsulation of proteins inside MS2 viral capsids

Glasgow, J. E., Capehart, S. L., Francis, M. B. & Tullman-Ercek, D., Oct 23 2012, In : ACS nano. 6, 10, p. 8658-8664 7 p.

Research output: Contribution to journalArticle

73 Scopus citations
2011

Synthesis of three advanced biofuels from ionic liquid-pretreated switchgrass using engineered Escherichia coli

Bokinsky, G., Peralta-Yahya, P. P., George, A., Holmes, B. M., Steen, E. J., Dietrich, J., Lee, T. S., Tullman-Ercek, D., Voigt, C. A., Simmons, B. A. & Keasling, J. D., Dec 13 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 50, p. 19949-19954 6 p.

Research output: Contribution to journalArticle

247 Scopus citations
2010

Enhanced translocation of recombinant proteins via the Tat pathway with chaperones in Escherichia coli

Lee, Y. F., Hsieh, H. Y., Tullman-Ercek, D., Chiang, T. K., Turner, R. J. & Lin, S. C., Sep 1 2010, In : Journal of the Taiwan Institute of Chemical Engineers. 41, 5, p. 540-546 7 p.

Research output: Contribution to journalArticle

2 Scopus citations
2009

Engineering the Salmonella type III secretion system to export spider silk monomers

Widmaier, D. M., Tullman-Ercek, D., Mirsky, E. A., Hill, R., Govindarajan, S., Minshull, J. & Voigt, C. A., Jan 20 2009, In : Molecular Systems Biology. 5, 309.

Research output: Contribution to journalArticle

92 Scopus citations
2008

Exploration of twin-arginine translocation for expression and purification of correctly folded proteins in Escherichia coli

Fisher, A. C., Kim, J. Y., Perez-Rodriguez, R., Tullman-Ercek, D., Fish, W. R., Henderson, L. A. & Delisa, M. P., Sep 2008, In : Microbial Biotechnology. 1, 5, p. 403-415 13 p.

Research output: Contribution to journalArticle

21 Scopus citations

Induction and Relaxation Dynamics of the Regulatory Network Controlling the Type III Secretion System Encoded within Salmonella Pathogenicity Island 1

Temme, K., Salis, H., Tullman-Ercek, D., Levskaya, A., Hong, S. H. & Voigt, C. A., Mar 14 2008, In : Journal of Molecular Biology. 377, 1, p. 47-61 15 p.

Research output: Contribution to journalArticle

42 Scopus citations
2007

Export pathway selectivity of Escherichia coli twin arginine translocation signal peptides

Tullman-Ercek, D., DeLisa, M. P., Kawarasaki, Y., Iranpour, P., Ribnicky, B., Palmer, T. & Georgiou, G., Mar 16 2007, In : Journal of Biological Chemistry. 282, 11, p. 8309-8316 8 p.

Research output: Contribution to journalArticle

98 Scopus citations
2003

Folding quality control in the export of proteins by the bacterial twin-arginine translocation pathway

DeLisat, M. P., Tullman, D. & Georgiou, G., May 13 2003, In : Proceedings of the National Academy of Sciences of the United States of America. 100, 10, p. 6115-6120 6 p.

Research output: Contribution to journalArticle

242 Scopus citations