Ilya Ruvinsky

  • 1800 Citations
19952019

Research output per year

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Research Output

  • 1800 Citations
  • 35 Article
  • 3 Review article
  • 2 Chapter
  • 1 Conference contribution
2019

An excreted small molecule promotes C. elegans reproductive development and aging

Ludewig, A. H., Artyukhin, A. B., Aprison, E. Z., Rodrigues, P. R., Pulido, D. C., Burkhardt, R. N., Panda, O., Zhang, Y. K., Gudibanda, P., Ruvinsky, I. & Schroeder, F. C., Aug 1 2019, In : Nature Chemical Biology. 15, 8, p. 838-845 8 p.

Research output: Contribution to journalArticle

3 Scopus citations

A primer on pheromone signaling in Caenorhabditis elegans for systems biologists

McGrath, P. T. & Ruvinsky, I., Feb 2019, In : Current Opinion in Systems Biology. 13, p. 23-30 8 p.

Research output: Contribution to journalReview article

4 Scopus citations

Coordinated Behavioral and Physiological Responses to a Social Signal Are Regulated by a Shared Neuronal Circuit

Aprison, E. Z. & Ruvinsky, I., Dec 2 2019, In : Current Biology. 29, 23, p. 4108-4115.e4

Research output: Contribution to journalArticle

2 Scopus citations

Dynamic Regulation of Adult-Specific Functions of the Nervous System by Signaling from the Reproductive System

Aprison, E. Z. & Ruvinsky, I., Dec 2 2019, In : Current Biology. 29, 23, p. 4116-4123.e3

Research output: Contribution to journalArticle

2 Scopus citations

Multiple Independent Recruitment of Sodefrin Precursor-Like Factors in Anuran Sexually Dimorphic Glands

Bossuyt, F., Schulte, L. M., Maex, M., Janssenswillen, S., Novikova, P. Y., Biju, S. D., Van De Peer, Y., Matthijs, S., Roelants, K., Martel, A., Van Bocxlaer, I. & Ruvinsky, I., Sep 1 2019, In : Molecular biology and evolution. 36, 9, p. 1921-1930 10 p.

Research output: Contribution to journalArticle

2017

Counteracting Ascarosides Act through Distinct Neurons to Determine the Sexual Identity of C. elegans Pheromones

Aprison, E. Z. & Ruvinsky, I., Sep 11 2017, In : Current Biology. 27, 17, p. 2589-2599.e3

Research output: Contribution to journalArticle

9 Scopus citations
2016

Sexually Antagonistic Male Signals Manipulate Germline and Soma of C. elegans Hermaphrodites

Aprison, E. Z. & Ruvinsky, I., Oct 24 2016, In : Current Biology. 26, 20, p. 2827-2833 7 p.

Research output: Contribution to journalArticle

28 Scopus citations
2015

Experience modulates the reproductive response to heat stress in C. elegans via multiple physiological processes

Gouvêa, D. Y., Aprison, E. Z. & Ruvinsky, I., Dec 1 2015, In : PloS one. 10, 12, e0145925.

Research output: Contribution to journalArticle

8 Scopus citations

Phylum-Level Conservation of Regulatory Information in Nematodes despite Extensive Non-coding Sequence Divergence

Gordon, K. L., Arthur, R. K. & Ruvinsky, I., May 1 2015, In : PLoS genetics. 11, 5, e1005268.

Research output: Contribution to journalArticle

6 Scopus citations

Sex Pheromones of C. elegans Males Prime the Female Reproductive System and Ameliorate the Effects of Heat Stress

Aprison, E. Z. & Ruvinsky, I., Jan 1 2015, In : PLoS genetics. 11, 12, e1005729.

Research output: Contribution to journalArticle

17 Scopus citations
2014

Balanced trade-offs between alternative strategies shape the response of C. elegans reproduction to chronic heat stress

Aprison, E. Z. & Ruvinsky, I., Aug 28 2014, In : PloS one. 9, 8, e105513.

Research output: Contribution to journalArticle

13 Scopus citations

Pervasive Divergence of Transcriptional Gene Regulation in Caenorhabditis Nematodes

Barrière, A. & Ruvinsky, I., Jun 2014, In : PLoS genetics. 10, 6, e1004435.

Research output: Contribution to journalArticle

11 Scopus citations
2013

Meiotic Product

Ruvinsky, I., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. Elsevier Inc, p. 344 1 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Segregation

Ruvinsky, I., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. Elsevier Inc, p. 353 1 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2012

Coevolution within and between Regulatory Loci Can Preserve Promoter Function Despite Evolutionary Rate Acceleration

Barrière, A., Gordon, K. L. & Ruvinsky, I., Sep 1 2012, In : PLoS genetics. 8, 9, e1002961.

Research output: Contribution to journalArticle

24 Scopus citations

Comparative studies of gene expression and the evolution of gene regulation

Romero, I. G., Ruvinsky, I. & Gilad, Y., Jul 1 2012, In : Nature Reviews Genetics. 13, 7, p. 505-516 12 p.

Research output: Contribution to journalReview article

206 Scopus citations

Family size and turnover rates among several classes of small non-protein-coding RNA genes in caenorhabditis nematodes

Wang, P. P. S. & Ruvinsky, I., Sep 24 2012, In : Genome biology and evolution. 4, 4, p. 565-574 10 p.

Research output: Contribution to journalArticle

4 Scopus citations

Macro-level modeling of the response of c. elegans reproduction to chronic heat stress

McMullen, P. D., Aprison, E. Z., Winter, P. B., Amaral, L. A. N., Morimoto, R. I. & Ruvinsky, I., Jan 1 2012, In : PLoS computational biology. 8, 1, e1002338.

Research output: Contribution to journalArticle

21 Scopus citations

Tempo and mode in evolution of transcriptional regulation

Gordon, K. L. & Ruvinsky, I., Jan 1 2012, In : PLoS genetics. 8, 1, e1002432.

Research output: Contribution to journalReview article

40 Scopus citations
2011

(534g) Dynamic response of c. elegans reproduction to chronic heat stress

Winter, P. B., McMullen, P. D., Aprison, E., Amaral, L. A. N., Morimoto, R. I. & Ruvinsky, I., Jan 1 2011, Systems Biology - Topical Conference at the 2011 AIChE Annual Meeting. AIChE, p. 70-71 2 p. (Systems Biology - Topical Conference at the 2011 AIChE Annual Meeting).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Distinct functional constraints partition sequence conservation in a cis-regulatory element

Barrière, A., Gordon, K. L. & Ruvinsky, I., Jun 1 2011, In : PLoS genetics. 7, 6, e1002095.

Research output: Contribution to journalArticle

18 Scopus citations

Evidence that purifying selection acts on promoter sequences

Arthur, R. K. & Ruvinsky, I., Nov 1 2011, In : Genetics. 189, 3, p. 1121-1126 6 p.

Research output: Contribution to journalArticle

2 Scopus citations

Functional conservation of Cis-Regulatory elements of Heat-Shock genes over long evolutionary distances

He, Z., Eichel, K. & Ruvinsky, I., Jul 29 2011, In : PloS one. 6, 7, e22677.

Research output: Contribution to journalArticle

6 Scopus citations
2010

Computational prediction of Caenorhabditis box H/ACA snoRNAs using genomic properties of their host genes

Wang, P. P. S. & Ruvinsky, I., Feb 1 2010, In : RNA. 16, 2, p. 290-298 9 p.

Research output: Contribution to journalArticle

4 Scopus citations
2008

Conservation of linkage and evolution of developmental function within the Tbx2/3/4/5 subfamily of T-box genes: Implications for the origin of vertebrate limbs

Horton, A. C., Mahadevan, N. R., Minguillon, C., Osoegawa, K., Rokhsar, D. S., Ruvinsky, I., de Jong, P. J., Logan, M. P. & Gibson-Brown, J. J., Sep 25 2008, In : Development Genes and Evolution. 218, 11-12, p. 613-628 16 p.

Research output: Contribution to journalArticle

42 Scopus citations
2007

Detection of broadly expressed neuronal genes in C. elegans

Ruvinsky, I., Ohler, U., Burge, C. B. & Ruvkun, G., Feb 15 2007, In : Developmental Biology. 302, 2, p. 617-626 10 p.

Research output: Contribution to journalArticle

26 Scopus citations
2003

Functional tests of enhancer conservation between distantly related species

Ruvinsky, I. & Ruvkun, G., Nov 1 2003, In : Development. 130, 21, p. 5133-5142 10 p.

Research output: Contribution to journalArticle

60 Scopus citations

Phylogenetic Analyses Alone Are Insufficient to Determine Whether Genome Duplication(s) Occurred During Early Vertebrate Evolution

Horton, A. C., Mahadevan, N. R., Ruvinsky, I. & Gibson-Brown, J. J., Oct 15 2003, In : Journal of Experimental Zoology Part B: Molecular and Developmental Evolution. 299, 1, p. 41-53 13 p.

Research output: Contribution to journalArticle

30 Scopus citations

The zebrafish van gogh mutation disrupts tbx1, which is involved in the DiGeorge deletion syndrome in humans

Piotrowski, T., Ahn, D. G., Schilling, T. F., Nair, S., Ruvinsky, I., Geisler, R., Rauch, G. J., Haffter, P., Zon, L. I., Zhou, Y., Foott, H., Dawid, I. B. & Ho, R. K., Oct 2003, In : Development. 130, 20, p. 5043-5052 10 p.

Research output: Contribution to journalArticle

164 Scopus citations
2002

Genetics analysis of mouse mutations Abnormal feet and tail and rough coat, which cause developmental abnormalities and alopecia

Ruvinsky, I., Chertkov, O., Borue, X. V., Agulnik, S. I., Gibson-Brown, J. J., Lyle, S. R. & Silver, L. M., Dec 1 2002, In : Mammalian Genome. 13, 12, p. 675-679 5 p.

Research output: Contribution to journalArticle

9 Scopus citations
2000

Genetic and developmental bases of serial homology in vertebrate limb evolution

Ruvinsky, I. & Gibson-Brown, J. J., Dec 1 2000, In : Development. 127, 24, p. 5233-5244 12 p.

Research output: Contribution to journalArticle

98 Scopus citations

Phylogenetic analysis of T-box genes demorostrates the importance of amphioxus for understanding evolution of the vertebrate genome

Ruvinsky, I., Silver, L. M. & Gibson-Brown, J. J., Nov 20 2000, In : Genetics. 156, 3, p. 1249-1257 9 p.

Research output: Contribution to journalArticle

57 Scopus citations

tbx20, a new vertebrate T-box gene expressed in the cranial motor neurons and developing cardiovascular structures in zebrafish

Ahn, D. G., Ruvinsky, I., Oates, A. C., Silver, L. M. & Ho, R. K., Jul 1 2000, In : Mechanisms of Development. 95, 1-2, p. 253-258 6 p.

Research output: Contribution to journalArticle

68 Scopus citations

The bHLH transcription factor Hand2 plays parallel roles in zebrafish heart and pectoral fin development

Yelon, D., Ticho, B., Halpern, M. E., Ruvinsky, I., Ho, R. K., Silver, L. M. & Stainier, D. Y. R., Jun 1 2000, In : Development. 127, 12, p. 2573-2582 10 p.

Research output: Contribution to journalArticle

230 Scopus citations

The evolution of paired appendages in vertebrates: T-box genes in the zebrafish

Ruvinsky, I., Oates, A. C., Silver, L. M. & Ho, R. K., Jan 1 2000, In : Development Genes and Evolution. 210, 2, p. 82-91 10 p.

Research output: Contribution to journalArticle

68 Scopus citations
1998

Characterization of the zebrafish tbx16 gene and evolution of the vertebrate T-box family

Ruvinsky, I., Silver, L. M. & Ho, R. K., Jun 2 1998, In : Development Genes and Evolution. 208, 2, p. 94-99 6 p.

Research output: Contribution to journalArticle

53 Scopus citations
1997

Newly identified paralogous groups on mouse chromosomes 5 and 11 reveal the age of a T-box cluster duplication

Ruvinsky, I. & Silver, L. M., Mar 1 1997, In : Genomics. 40, 2, p. 262-266 5 p.

Research output: Contribution to journalArticle

39 Scopus citations

Three novel T-box genes in Caenorhabditis elegans

Agulnik, S. I., Ruvinsky, I. & Silver, L. M., Jan 1 1997, In : Genome. 40, 4, p. 458-464 7 p.

Research output: Contribution to journalArticle

20 Scopus citations
1996

Evolution of mouse T-box genes by tandem duplication and cluster dispersion

Agulnik, S. I., Garvey, N., Hancock, S., Ruvinsky, I., Chapman, D. L., Agulnik, I., Bollag, R., Papaioannou, V. & Silver, L. M., Sep 14 1996, In : Genetics. 144, 1, p. 249-254 6 p.

Research output: Contribution to journalArticle

155 Scopus citations

Phylogenetic relationships among bufonoid frogs (Anura: Neobatrachia) inferred from mitochondrial DNA sequences

Ruvinsky, I. & Maxson, L. R., Jun 1996, In : Molecular Phylogenetics and Evolution. 5, 3, p. 533-547 15 p.

Research output: Contribution to journalArticle

71 Scopus citations
1995

Phylogenetic relationships of amphibian families inferred from DNA sequences of mitochondrial 12S and 16S ribosomal RNA genes

Hay, J. M., Ruvinsky, I., Hedges, S. B. & Maxson, L. R., Jan 1 1995, In : Molecular Biology and Evolution. 12, 5, p. 928-937 10 p.

Research output: Contribution to journalArticle

182 Scopus citations