Grants per year
Personal profile
Research Interests
Our lab uses biophysical methods, with particular emphasis on micromanipulation of single DNA molecules and single chromosomes, to study the internal structure of chromosomes in vivo, and to study chromosome-organizing proteins and DNA topoisomerases in vitro. We also develop mathematical models relevant to these types of experiments. Projects in progress involve combining fluorescence microscopy and force microscopy in experiments on DNA-protein complexes and whole chromosomes, and in-vivo studies of coupling of chromosome dynamics to gene expression.
Education/Academic qualification
Physics, PhD, Massachusetts Institute of Technology
… → 1989
Physics, BSc, University of Alberta
… → 1984
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Collaborations and top research areas from the last five years
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Activities of nucleoprotein complexes visualized in single-molecule experiments
Marko, J. F. (PD/PI) & Marko, J. F. (PD/PI)
National Institute of General Medical Sciences
1/1/22 → 11/30/25
Project: Research project
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Center for 3D Structure and Physics of the Genome
Marko, J. F. (PD/PI) & Marko, J. F. (PD/PI)
University of Massachusetts Medical School, National Human Genome Research Institute
9/18/20 → 6/30/25
Project: Research project
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Micromechanical basis of meiotic chromosome condensation and architecture
Marko, J. F. (PD/PI) & Marko, J. F. (PD/PI)
University of Illinois at Urbana-Champaign, National Institute of General Medical Sciences
8/1/20 → 7/31/25
Project: Research project
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Analyzing the role of chromatin compaction in nuclear mechanics, structure, and function
Marko, J. F. (PD/PI)
National Institute of General Medical Sciences
4/1/18 → 3/31/20
Project: Research project
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Center for 3D Structure and Physics of the Genome
Marko, J. F. (PD/PI)
University of Massachusetts Medical School, National Institute of Diabetes and Digestive and Kidney Diseases
8/1/17 → 7/31/20
Project: Research project
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Heterogeneous flexibility can contribute to chromatin segregation in the cell nucleus
Girard, M., De La Cruz, M. O., Marko, J. F. & Erbaş, A., Jul 2024, In: Physical Review E. 110, 1, 014403.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
RNA interacts with topoisomerase I to adjust DNA topology
Bhola, M., Abe, K., Orozco, P., Rahnamoun, H., Avila-Lopez, P., Taylor, E., Muhammad, N., Liu, B., Patel, P., Marko, J. F., Starner, A. C., He, C., Van Nostrand, E. L., Mondragón, A. & Lauberth, S. M., Sep 5 2024, In: Molecular cell. 84, 17, p. 3192-3208.e11Research output: Contribution to journal › Article › peer-review
2 Scopus citations -
A Versatile Micromanipulation Apparatus for Biophysical Assays of the Cell Nucleus
Currey, M. L., Kandula, V., Biggs, R., Marko, J. F. & Stephens, A. D., Aug 2022, In: Cellular and Molecular Bioengineering.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
DNA tension-modulated translocation and loop extrusion by SMC complexes revealed by molecular dynamics simulations
Nomidis, S. K., Carlon, E., Gruber, S. & Marko, J. F., May 20 2022, In: Nucleic acids research. 50, 9, p. 4974-4987 14 p.Research output: Contribution to journal › Article › peer-review
Open Access23 Scopus citations -
High-resolution, genome-wide mapping of positive supercoiling in chromosomes
Guo, M. S., Kawamura, R., Littlehale, M., Marko, J. F. & Laub, M. T., Jul 2021, In: eLife. 10, e67236.Research output: Contribution to journal › Article › peer-review
Open Access49 Scopus citations