Lee Alex Donald Cooper

  • Source: Scopus
20062020

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  • 2019

    An Ensemble-based Active Learning for Breast Cancer Classification

    Lee, S., Amgad, M., Masoud, M., Subramanian, R., Gutman, D. & Cooper, L., Nov 2019, Proceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019. Yoo, I., Bi, J. & Hu, X. T. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 2549-2553 5 p. 8983317. (Proceedings - 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations
  • Joint region and nucleus segmentation for characterization of tumor infiltrating lymphocytes in breast cancer

    Amgad, M., Sarkar, A., Srinivas, C., Redman, R., Ratra, S., Bechert, C. J., Calhoun, B. C., Mrazeck, K., Kurkure, U., Cooper, L. A. D. & Barnes, M., 2019, Medical Imaging 2019: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 109560M. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10956).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations
  • 2018

    Vectorized persistent homology representations for characterizing glandular architecture in histology images

    Chittajallu, D. R., Siekierski, N., Lee, S., Gerber, S., Beezley, J., Manthey, D., Gutman, D. & Cooper, L. A. D., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, p. 232-235 4 p. (Proceedings - International Symposium on Biomedical Imaging; vol. 2018-April).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Scopus citations
  • 2015

    An interactive learning framework for scalable classification of pathology images

    Nalisnik, M., Gutman, D. A., Kong, J. & Cooper, L. A. D., Dec 22 2015, Proceedings - 2015 IEEE International Conference on Big Data, IEEE Big Data 2015. Luo, F., Ogan, K., Zaki, M. J., Haas, L., Ooi, B. C., Kumar, V., Rachuri, S., Pyne, S., Ho, H., Hu, X., Yu, S., Hsiao, M. H-I. & Li, J. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 928-935 8 p. 7363841. (Proceedings - 2015 IEEE International Conference on Big Data, IEEE Big Data 2015).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    6 Scopus citations
  • Spatiotemporal visualization of cell membrane dynamics and protein colocalization reveals correlation between membrane dynamics and metastatic invasion

    Hou, Y., Cooper, L., Wilkinson, S., Marcus, A. & Brat, D., Sep 9 2015, BCB 2015 - 6th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 476-477 2 p. (BCB 2015 - 6th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • 2014

    Comparative performance analysis of Intel Xeon Phi, GPU, and CPU: A case study from microscopy image analysis

    Teodoro, G., Kurc, T., Kong, J., Cooper, L. A. D. & Saltz, J., 2014, Proceedings - IEEE 28th International Parallel and Distributed Processing Symposium, IPDPS 2014. IEEE Computer Society, p. 1063-1072 10 p. 6877335. (Proceedings of the International Parallel and Distributed Processing Symposium, IPDPS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    37 Scopus citations
  • 2012

    Accelerating large scale image analyses on parallel, CPU-GPU equipped systems

    Teodoro, G., Kurc, T. M., Pan, T., Cooper, L. A. D., Kong, J., Widener, P. & Saltz, J. H., 2012, Proceedings of the 2012 IEEE 26th International Parallel and Distributed Processing Symposium, IPDPS 2012. p. 1093-1104 12 p. 6267914. (Proceedings of the 2012 IEEE 26th International Parallel and Distributed Processing Symposium, IPDPS 2012).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    23 Scopus citations
  • High performance computing techniques for scaling image analysis workflows

    Widener, P. M., Kurc, T., Chen, W., Wang, F., Yang, L., Hu, J., Kumar, V., Chu, V., Cooper, L. A. D., Kong, J., Sharma, A., Pan, T., Saltz, J. H. & Foran, D. J., 2012, Applied Parallel and Scientific Computing - 10th International Conference, PARA 2010, Revised Selected Papers. PART 2 ed. p. 67-77 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7134 LNCS, no. PART 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • ZPEG: A hybrid DPCM-DCT based approach for compression of Z-stack images

    Khire, S., Cooper, L. A. D., Park, Y., Carter, A., Jayant, N. & Saltz, J., 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2012. p. 5424-5427 4 p. 6347221. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    6 Scopus citations
  • 2011

    Acceleration of two point correlation function calculation for pathology image segmentation

    Cooper, L. A. D., Saltz, J. H., Catalyurek, U. & Huang, K., 2011, Proceedings - 2011 1st IEEE International Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2011. p. 174-181 8 p. 6061389. (Proceedings - 2011 1st IEEE International Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Parallel automatic registration of large scale microscopic images on multiprocessor CPUs and GPUs

    Cooper, L. A. D., Huang, K. & Ujaldon, M., Dec 20 2011, 2011 IEEE International Symposium on Parallel and Distributed Processing, Workshops and Phd Forum, IPDPSW 2011. p. 1367-1376 10 p. 6008991. (IEEE International Symposium on Parallel and Distributed Processing Workshops and Phd Forum).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations
  • 2010

    High-performance systems for in silico microscopy imaging studies

    Wang, F., Kurc, T., Widener, P., Pan, T., Kong, J., Cooper, L. A. D., Gutman, D., Sharma, A., Cholleti, S., Kumar, V. & Saltz, J., Nov 9 2010, Data Integration in the Life Sciences - 7th International Conference, DILS 2010, Proceedings. p. 3-18 16 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6254 LNBI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations
  • Two-point correlation as a feature for histology images: Feature space structure and correlation updating

    Cooper, L. A. D., Saltz, J., MacHiraju, R. & Huang, K., Sep 17 2010, 2010 IEEE Computer Society Conference on Computer Vision and Pattern Recognition - Workshops, CVPRW 2010. p. 79-86 8 p. 5543453. (2010 IEEE Computer Society Conference on Computer Vision and Pattern Recognition - Workshops, CVPRW 2010).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    5 Scopus citations
  • 2007

    Spatial segmentation of temporal texture using mixture linear models

    Cooper, L. A. D., Liu, J. & Huang, K., Dec 1 2007, Dynamical Vision - ICCV 2005 and ECCV 2006 Workshops, WDV 2005 and WDV 2006, Beijing, China, October 21, 2005, Graz, Austria, May 13, 2006, Revised Papers. p. 142-150 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4358 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    7 Scopus citations
  • 2006

    Fast automatic registration algorithm for large microscopy images

    Huang, K., Cooper, L. A. D., Sharma, A. & Pan, T., Dec 1 2006, 2006 IEEE/NLM Life Science Systems and Applications Workshop, LiSA 2006. 4015815. (2006 IEEE/NLM Life Science Systems and Applications Workshop, LiSA 2006).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    9 Scopus citations