If you made any changes in Pure, your changes will be visible here soon.

Personal profile

Education/Academic qualification

Physics, PhD, Boston University

… → 1996

Physics, MS, University of Lisbon

Physics, BS, University of Lisbon

Research interests

  • Complex networks in nature
  • study of innovation and creativity
  • system-level modeling of biological processes

Fingerprint Dive into the research topics where Luis A N Amaral is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

scaling Physics & Astronomy
economics Physics & Astronomy
Fluctuations Mathematics
exponents Physics & Astronomy
Scaling Mathematics
Economics Mathematics
Statistical Physics Mathematics
Universality Mathematics

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Grants 2004 2024

artificial intelligence
science
sampling
programme
world

Research Output 1993 2019

Large-scale analysis of micro-level citation patterns reveals nuanced selection criteria

Poncela-Casasnovas, J., Gerlach, M., Aguirre, N. & Amaral, L. A. N., Jun 1 2019, In : Nature Human Behaviour. 3, 6, p. 568-575 8 p.

Research output: Contribution to journalLetter

Patient Selection
Publications
Library Science
Bibliometrics
History
2 Citations (Scopus)

Multidimensional assessment of the host response in mechanically ventilated patients with suspected pneumonia

Walter, J. M., Ren, Z., Yacoub, T., Reyfman, P. A., Shah, R. D., Abdala-Valencia, H., Nam, K., Morgan, V. K., Anekalla, K. R., Joshi, N., McQuattie-Pimentel, A. C., Chen, C. I., Chi, M., Han, S. H., Gonzalez-Gonzalez, F. J., Soberanes, S., Aillon, R. P., Watanabe, S., Williams, K. J. N., Lu, Z. & 13 others, Paonessa, J., Hountras, P., Breganio, M., Borkowski, N., Donnelly, H. K., Allen, J. P., Amaral, L. A. N., Bharat, A., Misharin, A., Bagheri, N., Hauser, A. R., Budinger, GR. S. & Wunderink, R. G., May 15 2019, In : American journal of respiratory and critical care medicine. 199, 10, p. 1225-1237 13 p.

Research output: Contribution to journalArticle

Bacterial Pneumonia
Pneumonia
Macrophages
Bronchoalveolar Lavage Fluid
Alveolar Macrophages

Repressive Gene Regulation Synchronizes Development with Cellular Metabolism

Cassidy, J. J., Bernasek, S. M., Bakker, R., Giri, R., Peláez, N., Eder, B., Bobrowska, A., Bagheri, N., Amaral, L. A. N. & Carthew, R. W., Aug 8 2019, In : Cell. 178, 4, p. 980-992 13 p.

Research output: Contribution to journalArticle

Metabolism
Gene expression
Gene Regulatory Networks
Genes
Developmental Genes
11 Citations (Scopus)

Single-cell transcriptomic analysis of human lung provides insights into the pathobiology of pulmonary fibrosis

Reyfman, P. A., Walter, J. M., Joshi, N., Anekalla, K. R., McQuattie-Pimentel, A. C., Chiu, S., Fernandez, R., Akbarpour, M., Chen, C. I., Ren, Z., Verma, R., Abdala-Valencia, H., Nam, K., Chi, M., Han, S. H., Gonzalez-Gonzalez, F. J., Soberanes, S., Watanabe, S., Williams, K. J. N., Flozak, A. S. & 29 others, Nicholson, T. T., Morgan, V. K., Winter, D. R., Hinchcliff, M., Hrusch, C. L., Guzy, R. D., Bonham, C. A., Sperling, A. I., Bag, R., Hamanaka, R. B., Mutlu, G. M., Yeldandi, A. V., Marshall, S. A., Shilatifard, A., Amaral, L. A. N., Perlman, H. R., Sznajder, J. I., Christine Argento, A., Gillespie, C. T., Dematte, J., Jain, M., Singer, B., Ridge, K. M., Lam, A. P., Bharat, A., Bhorade, S. M., Gottardi, C., Budinger, GR. S. & Misharin, A., Jun 15 2019, In : American journal of respiratory and critical care medicine. 199, 12, p. 1517-1536 20 p.

Research output: Contribution to journalArticle

Open Access
Single-Cell Analysis
Pulmonary Fibrosis
Lung
RNA Sequence Analysis
Alveolar Macrophages

A novel framework for evaluating the performance of codon usage bias metrics

Liu, S. S., Hockenberry, A. J., Jewett, M. C. & Amaral, L. A. N., Jan 1 2018, In : Journal of the Royal Society Interface. 15, 138, 20170667.

Research output: Contribution to journalArticle

Codon
Standardization
Genes
Protein folding
DNA sequences