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Personal profile

Education/Academic qualification

Physics, PhD, Boston University

… → 1996

Physics, MS, University of Lisbon

Physics, BS, University of Lisbon

Fingerprint Fingerprint is based on mining the text of the experts' scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

scaling Physics & Astronomy
economics Physics & Astronomy
Fluctuations Mathematics
exponents Physics & Astronomy
Scaling Mathematics
Economics Mathematics
Statistical Physics Mathematics
Universality Mathematics

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Grants 2004 2023

Pneumonia
Microbiota
Biomarkers
Fungal DNA
RNA

Research Output 1993 2019

Large-scale analysis of micro-level citation patterns reveals nuanced selection criteria

Poncela-Casasnovas, J., Gerlach, M., Aguirre, N. & Amaral, L. A. N., Jun 1 2019, In : Nature Human Behaviour. 3, 6, p. 568-575 8 p.

Research output: Contribution to journalLetter

Patient Selection
Publications
Library Science
Bibliometrics
History
1 Citation (Scopus)

Multidimensional assessment of the host response in mechanically ventilated patients with suspected pneumonia

Walter, J. M., Ren, Z., Yacoub, T., Reyfman, P. A., Shah, R. D., Abdala-Valencia, H., Nam, K., Morgan, V. K., Anekalla, K. R., Joshi, N., McQuattie-Pimentel, A. C., Chen, C. I., Chi, M., Han, S. H., Gonzalez-Gonzalez, F. J., Soberanes, S., Aillon, R. P., Watanabe, S., Williams, K. J. N., Lu, Z. & 13 othersPaonessa, J., Hountras, P., Breganio, M., Borkowski, N., Donnelly, H. K., Allen, J. P., Amaral, L. A. N., Bharat, A., Misharin, A. V., Bagheri, N., Hauser, A. R., Budinger, GR. S. & Wunderink, R. G., May 15 2019, In : American journal of respiratory and critical care medicine. 199, 10, p. 1225-1237 13 p.

Research output: Contribution to journalArticle

Bacterial Pneumonia
Pneumonia
Macrophages
Bronchoalveolar Lavage Fluid
Alveolar Macrophages
7 Citations (Scopus)

Single-cell transcriptomic analysis of human lung provides insights into the pathobiology of pulmonary fibrosis

Reyfman, P. A., Walter, J. M., Joshi, N., Anekalla, K. R., McQuattie-Pimentel, A. C., Chiu, S., Fernandez, R., Akbarpour, M., Chen, C. I., Ren, Z., Verma, R., Abdala-Valencia, H., Nam, K., Chi, M., Han, S. H., Gonzalez-Gonzalez, F. J., Soberanes, S., Watanabe, S., Williams, K. J. N., Flozak, A. S. & 29 othersNicholson, T. T., Morgan, V. K., Winter, D. R., Hinchcliff, M., Hrusch, C. L., Guzy, R. D., Bonham, C. A., Sperling, A. I., Bag, R., Hamanaka, R. B., Mutlu, G. M., Yeldandi, A. V., Marshall, S. A., Shilatifard, A., Amaral, L. A. N., Perlman, H., Sznajder, J. I., Christine Argento, A., Gillespie, C. T., Dematte, J., Jain, M., Singer, B. D., Ridge, K. M., Lam, A. P., Bharat, A., Bhorade, S. M., Gottardi, C., Budinger, GR. S. & Misharin, A. V., Jun 15 2019, In : American journal of respiratory and critical care medicine. 199, 12, p. 1517-1536 20 p.

Research output: Contribution to journalArticle

Open Access
Single-Cell Analysis
Pulmonary Fibrosis
Lung
RNA Sequence Analysis
Alveolar Macrophages

A novel framework for evaluating the performance of codon usage bias metrics

Liu, S. S., Hockenberry, A. J., Jewett, M. C. & Amaral, L. A. N., Jan 1 2018, In : Journal of the Royal Society Interface. 15, 138, 20170667.

Research output: Contribution to journalArticle

Codon
Standardization
Genes
Protein folding
DNA sequences
6 Citations (Scopus)

A robust data-driven approach identifies four personality types across four large data sets

Gerlach, M., Farb, B., Revelle, W. R. & Amaral, L. A. N., Oct 1 2018, In : Nature Human Behaviour. 2, 10, p. 735-742 8 p.

Research output: Contribution to journalLetter

Personality
Datasets
Sample Size
Cluster Analysis