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Research Output 1999 2019

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Conference contribution
2015

Identification of candidate regulatory SNPs by integrative analysis for prostate cancer genome data

Jung, S., Jin, H. & Davuluri, R. V., Sep 9 2015, BCB 2015 - 6th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 278-285 8 p. (BCB 2015 - 6th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nucleotides
Polymorphism
Single Nucleotide Polymorphism
Prostatic Neoplasms
Genes
2014

Comparison of data discretization methods for cross platform transfer of gene-expression based tumor subtyping classifier

Jung, S., Bi, Y. & Davuluri, R. V., Jul 24 2014, 2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2014. Institute of Electrical and Electronics Engineers Inc., 6863918. (2014 IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Gene expression
Feature extraction
Tumors
Classifiers
Genes
2010

Data mining of mRNA-Seq and small RNA-Seq data to find microRNA targets

Kim, H. & Davuluri, R. V., Oct 25 2010, 2010 ACM International Conference on Bioinformatics and Computational Biology, ACM-BCB 2010. p. 499-501 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Data Mining
RNA
MicroRNAs
Data mining
Messenger RNA
2 Citations (Scopus)

Estimating the expression of transcript isoforms from mRNA-seq via nonnegative least squares

Kim, H., Bi, Y. & Davuluri, R. V., Sep 6 2010, 10th IEEE International Conference on Bioinformatics and Bioengineering 2010, BIBE 2010. p. 296-297 2 p. 5521668

Research output: Chapter in Book/Report/Conference proceedingConference contribution

RNA Isoforms
Least-Squares Analysis
Protein Isoforms
Genes
Messenger RNA
2009

Discovery of regulatory networks in plants by linking promoter and transcription factor databases

Yilmaz, A., Palaniswamy, S., Davuluri, R. & Grotewold, E., Nov 2 2009, OCCBIO'09: 2009 Ohio Collaborative Conference on Bioinformatics. p. 61-64 4 p. 5159163

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcription factors
Transcription Factors
Databases
Arabidopsis
Genes
1 Citation (Scopus)

Knowledge-driven analysis and data integration for high-throughput biological data

Ochs, M. F., Quackenbush, J., Davuluri, R. & Ressom, H., Dec 1 2009, Pacific Symposium on Biocomputing 2009, PSB 2009. p. 353-355 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Thesauri
Data integration
Throughput
Genomics
2008

In silico prediction of target SNPs affecting miR-mRNA interaction

Sun, H., Nicoloso, M. S., Bhattacharyya, A., Calin, G. A. & Davuluri, R. V., Dec 1 2008, Proceedings - 2008 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW. p. 211-214 4 p. 4686238. (Proceedings - 2008 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nucleotides
Polymorphism
Computer Simulation
Single Nucleotide Polymorphism
Messenger RNA

Knowledge-driven analysis and data integration for high-throughput biological data

Ochs, M. F., Quackenbush, J. & Davuluri, R., Dec 1 2008, Pacific Symposium on Biocomputing 2008, PSB 2008. p. 137-140 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Thesauri
Data integration
Throughput
Statistical Data Interpretation
Statistical Models