Grants per year
Personal profile
Research Interests
A primary goal of my work is to establish the approaches and benefits of genomics informed personalized medicine. A key element of this is participation in the eMERGE consortium (http://gwas.net), where I serve as the steering committee chair. This project uses Electronic Health Records linked biobank samples (www.nugene.org) to study the genetics of disease susceptibility, therapeutic outcomes and pharmacogenomics. My group is also interested in genome informatics, particularly genome annotation and visualization technology.
Training Experience
1984 | Postdoctoral Fellowship, Massachusetts Institute of Technology |
Education/Academic qualification
PhD, Microbiology, University of Michigan
… → 1980
Research interests keywords
- Bioinformatics
- Biotechnology
- Cell Biology
- Cytoskeleton
- Genetics
- Genomics
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Collaborations and top research areas from the last five years
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WashU-Northwestern Genomic Variation and Function Data and Administrative Coordinating Center
Yue, F. (PD/PI), Yue, F. (PD/PI), Chisholm, R. L. (Co-Investigator), Chisholm, R. L. (Co-Investigator), Luo, Y. (Co-Investigator), Luo, Y. (Co-Investigator), Stranger, B. E. (Co-Investigator) & Stranger, B. E. (Co-Investigator)
Washington University in St. Louis, National Human Genome Research Institute
8/24/21 → 5/31/26
Project: Research project
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Dictyostelium Community Resource
Chisholm, R. L. (PD/PI) & Chisholm, R. L. (PD/PI)
National Institute of General Medical Sciences
9/1/20 → 8/31/25
Project: Research project
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Northwestern Genomic Risk Assessment and Management Program
Chisholm, R. L. (PD/PI), Chisholm, R. L. (PD/PI), McNally, E. M. (PD/PI), McNally, E. M. (PD/PI), Rasmussen-Torvik, L. J. (PD/PI), Rasmussen-Torvik, L. J. (PD/PI), Gordon, A. S. (Co-Investigator), Gordon, A. S. (Co-Investigator), Kho, A. N. (Co-Investigator), Kho, A. N. (Co-Investigator), Luo, Y. (Co-Investigator), Luo, Y. (Co-Investigator), Perera, M. (Co-Investigator), Perera, M. (Co-Investigator), Roy-Puckelwartz, M. J. (Co-Investigator), Roy-Puckelwartz, M. J. (Co-Investigator), Scherr, C. E. L. (Co-Investigator), Scherr, C. E. L. (Co-Investigator), Scherr, C. E. L. (Co-Investigator), Scholtens, D. M. (Co-Investigator), Scholtens, D. M. (Co-Investigator), Smith, M. E. (Co-Investigator), Smith, M. E. (Co-Investigator), Starren, J. (Co-Investigator), Starren, J. (Co-Investigator), Walunas, T. L. (Co-Investigator), Walunas, T. L. (Co-Investigator), Wehbe, F. (Co-Investigator), Wehbe, F. (Co-Investigator), Aufox, S. A. (Other), Aufox, S. A. (Other), Hoell, C. (Other) & Hoell, C. (Other)
National Human Genome Research Institute
7/1/20 → 4/30/25
Project: Research project
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The Illinois Precision Medicine Consortium (IPMC)
Ho, J. (PD/PI), Chisholm, R. L. (Co-Investigator), Greenland, P. (Co-Investigator), Patel, R. B. (Co-Investigator), Rasmussen-Torvik, L. J. (Co-Investigator) & Simon, M. A. (Co-Investigator)
The University of Chicago, Office of the Director, National Institutes of Health
9/1/23 → 8/31/24
Project: Research project
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WashU-Northwestern Genomic Variation and Function Data and Administrative Coordinating Center
Yue, F. (PD/PI), Chisholm, R. L. (Co-Investigator), Luo, Y. (Co-Investigator) & Stranger, B. E. (Co-Investigator)
Washington University in St. Louis, National Human Genome Research Institute
6/1/22 → 5/31/23
Project: Research project
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A genomic mutational constraint map using variation in 76,156 human genomes
Genome Aggregation Database Consortium, Jan 4 2024, In: Nature. 625, 7993, p. 92-100 9 p.Research output: Contribution to journal › Article › peer-review
109 Scopus citations -
Author Correction: A genomic mutational constraint map using variation in 76,156 human genomes (Nature, (2024), 625, 7993, (92-100), 10.1038/s41586-023-06045-0)
Genome Aggregation Database Consortium, Feb 1 2024, In: Nature. 626, 7997, p. E1Research output: Contribution to journal › Comment/debate › peer-review
Open Access3 Scopus citations -
Genetic sex validation for sample tracking in next-generation sequencing clinical testing
the eMERGE III consortium, Dec 2024, In: BMC Research Notes. 17, 1, 62.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Inferring compound heterozygosity from large-scale exome sequencing data
Guo, M. H., Francioli, L. C., Stenton, S. L., Goodrich, J. K., Watts, N. A., Singer-Berk, M., Groopman, E., Darnowsky, P. W., Solomonson, M., Baxter, S., Abreu, M., Salinas, C. A. A., Ahmad, T., Albert, C. M., Alföldi, J., Ardissino, D., Armean, I. M., Atzmon, G., Banks, E. & Barnard, J. & 212 others, , Jan 2024, In: Nature Genetics. 56, 1, p. 152-161 10 p.Research output: Contribution to journal › Article › peer-review
4 Scopus citations -
Managing differential performance of polygenic risk scores across groups: Real-world experience of the eMERGE Network
Lewis, A. C. F., Chisholm, R. L., Connolly, J. J., Esplin, E. D., Glessner, J., Gordon, A., Green, R. C., Hakonarson, H., Harr, M., Holm, I. A., Jarvik, G. P., Karlson, E., Kenny, E. E., Kottyan, L., Lennon, N., Linder, J. E., Luo, Y., Martin, L. J., Perez, E. & Puckelwartz, M. J. & 8 others, , Jun 6 2024, In: American journal of human genetics. 111, 6, p. 999-1005 7 p.Research output: Contribution to journal › Review article › peer-review
Datasets
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Additional file 4 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology
Gruenheit, N. (Creator), Baldwin, A. (Creator), Stewart, B. (Creator), Jaques, S. (Creator), Keller, T. (Creator), Parkinson, K. (Creator), Salvidge, W. (Creator), Baines, R. (Creator), Brimson, C. (Creator), Wolf, J. B. (Creator), Chisholm, R. (Creator), Harwood, A. J. (Creator), Thompson, C. R. L. (Creator) & Chisholm, R. (Creator), figshare, 2021
DOI: 10.6084/m9.figshare.16435989, https://springernature.figshare.com/articles/dataset/Additional_file_4_of_Mutant_resources_for_functional_genomics_in_Dictyostelium_discoideum_using_REMI-seq_technology/16435989
Dataset
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Additional file 3 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology
Gruenheit, N. (Creator), Baldwin, A. (Creator), Stewart, B. (Creator), Jaques, S. (Creator), Keller, T. (Creator), Parkinson, K. (Creator), Salvidge, W. (Creator), Baines, R. (Creator), Brimson, C. (Creator), Wolf, J. B. (Creator), Chisholm, R. (Creator), Harwood, A. J. (Creator), Thompson, C. R. L. (Creator) & Chisholm, R. (Creator), figshare, 2021
DOI: 10.6084/m9.figshare.16435986, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Mutant_resources_for_functional_genomics_in_Dictyostelium_discoideum_using_REMI-seq_technology/16435986
Dataset
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Additional file 14 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology
Gruenheit, N. (Creator), Baldwin, A. (Creator), Stewart, B. (Creator), Jaques, S. (Creator), Keller, T. (Creator), Parkinson, K. (Creator), Salvidge, W. (Creator), Baines, R. (Creator), Brimson, C. (Creator), Wolf, J. B. (Creator), Chisholm, R. (Creator), Harwood, A. J. (Creator), Thompson, C. R. L. (Creator) & Chisholm, R. (Creator), figshare, 2021
DOI: 10.6084/m9.figshare.16435977, https://springernature.figshare.com/articles/dataset/Additional_file_14_of_Mutant_resources_for_functional_genomics_in_Dictyostelium_discoideum_using_REMI-seq_technology/16435977
Dataset
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Additional file 10 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology
Gruenheit, N. (Creator), Baldwin, A. (Creator), Stewart, B. (Creator), Jaques, S. (Creator), Keller, T. (Creator), Parkinson, K. (Creator), Salvidge, W. (Creator), Baines, R. (Creator), Brimson, C. (Creator), Wolf, J. B. (Creator), Chisholm, R. (Creator), Harwood, A. J. (Creator), Thompson, C. R. L. (Creator) & Chisholm, R. (Creator), figshare, 2021
DOI: 10.6084/m9.figshare.16435965, https://springernature.figshare.com/articles/dataset/Additional_file_10_of_Mutant_resources_for_functional_genomics_in_Dictyostelium_discoideum_using_REMI-seq_technology/16435965
Dataset
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Additional file 1 of Mutant resources for functional genomics in Dictyostelium discoideum using REMI-seq technology
Gruenheit, N. (Creator), Baldwin, A. (Creator), Stewart, B. (Creator), Jaques, S. (Creator), Keller, T. (Creator), Parkinson, K. (Creator), Salvidge, W. (Creator), Baines, R. (Creator), Brimson, C. (Creator), Wolf, J. B. (Creator), Chisholm, R. (Creator), Harwood, A. J. (Creator), Thompson, C. R. L. (Creator) & Chisholm, R. (Creator), figshare, 2021
DOI: 10.6084/m9.figshare.16435980, https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Mutant_resources_for_functional_genomics_in_Dictyostelium_discoideum_using_REMI-seq_technology/16435980
Dataset