• 2551 Citations
19962021
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Research Output 1996 2019

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Article
2019

Enhancing materials property prediction by leveraging computational and experimental data using deep transfer learning

Jha, D., Choudhary, K., Tavazza, F., Liao, W. K., Choudhary, A., Campbell, C. & Agrawal, A., Dec 1 2019, In : Nature communications. 10, 1, 5316.

Research output: Contribution to journalArticle

Open Access
learning
Density functional theory
Materials properties
density functional theory
predictions
11 Citations (Scopus)

Establishing structure-property localization linkages for elastic deformation of three-dimensional high contrast composites using deep learning approaches

Yang, Z., Yabansu, Y. C., Jha, D., Liao, W. K., Choudhary, A. N., Kalidindi, S. R. & Agrawal, A., Mar 2019, In : Acta Materialia. 166, p. 335-345 11 p.

Research output: Contribution to journalArticle

Elastic deformation
Composite materials
Microstructure
Materials science
Learning systems
6 Citations (Scopus)

Microstructure optimization with constrained design objectives using machine learning-based feedback-aware data-generation

Paul, A., Acar, P., Liao, W. K., Choudhary, A., Sundararaghavan, V. & Agrawal, A., Apr 1 2019, In : Computational Materials Science. 160, p. 334-351 18 p.

Research output: Contribution to journalArticle

machine learning
Learning systems
Microstructure
Machine Learning
Feedback
2 Citations (Scopus)
Dermatoglyphics
Donor Selection
Molecules
Neural Networks (Computer)
Vulnerable Populations

Scalable Algorithms for MPI Intergroup Allgather and Allgatherv

Kang, Q., Träff, J. L., Al-Bahrani, R., Agrawal, A., Choudhary, A. & Liao, W. K., Jul 2019, In : Parallel Computing. 85, p. 220-230 11 p.

Research output: Contribution to journalArticle

Collective Communication
Communication
Large Data
Supercomputer
Vertex of a graph
2018
4 Citations (Scopus)

Data samplingschemes formicrostructure designwith vibrational tuning constraints

Paul, A., Acar, P., Liu, R., Liao, W-K., Choudhary, A. N., Sundararaghavan, V. & Agrawal, A., Jan 1 2018, In : AIAA Journal. 56, 3, p. 1239-1250 12 p.

Research output: Contribution to journalArticle

Tuning
Microstructure
Military vehicles
Yield stress
Costs
24 Citations (Scopus)

Deep learning approaches for mining structure-property linkages in high contrast composites from simulation datasets

Yang, Z., Yabansu, Y. C., Al-Bahrani, R., Liao, W. K., Choudhary, A. N., Kalidindi, S. R. & Agrawal, A., Aug 2018, In : Computational Materials Science. 151, p. 278-287 10 p.

Research output: Contribution to journalArticle

linkages
Linkage
learning
Mining
Composite
22 Citations (Scopus)

ElemNet: Deep Learning the Chemistry of Materials From Only Elemental Composition

Jha, D., Ward, L., Paul, A., Liao, W-K., Choudhary, A. N., Wolverton, C. M. & Agrawal, A., Dec 1 2018, In : Scientific reports. 8, 1, 17593.

Research output: Contribution to journalArticle

Learning
Neural Networks (Computer)
Artificial Intelligence
Machine Learning
11 Citations (Scopus)

Extracting grain orientations from EBSD patterns of polycrystalline materials using convolutional neural networks

Jha, D., Singh, S., Al-Bahrani, R., Liao, W. K., Choudhary, A., De Graef, M. & Agrawal, A., Oct 1 2018, In : Microscopy and Microanalysis. 24, 5, p. 497-502 6 p.

Research output: Contribution to journalArticle

Polycrystalline materials
disorientation
Electron diffraction
Crystal orientation
Diffraction patterns
2017
5 Citations (Scopus)

A flexible I/O arbitration framework for netCDF-based big data processing workflows on high-end supercomputers

Liao, J., Gerofi, B., Lien, G. Y., Miyoshi, T., Nishizawa, S., Tomita, H., Liao, W. K., Choudhary, A. & Ishikawa, Y., Aug 10 2017, In : Concurrency Computation. 29, 15, e4161.

Research output: Contribution to journalArticle

Arbitration
Supercomputers
Supercomputer
Work Flow
Weather forecasting
6 Citations (Scopus)

Reducing I/O variability using dynamic I/O path characterization in petascale storage systems

Son, S. W., Sehrish, S., Liao, W. K., Oldfield, R. & Choudhary, A., May 1 2017, In : Journal of Supercomputing. 73, 5, p. 2069-2097 29 p.

Research output: Contribution to journalArticle

Storage System
Bandwidth
Path
Program processors
Data storage equipment
2016
54 Citations (Scopus)

HACC: Simulating sky surveys on state-of-the-art supercomputing architectures

Habib, S., Pope, A., Finkel, H., Frontiere, N., Heitmann, K., Daniel, D., Fasel, P., Morozov, V., Zagaris, G., Peterka, T., Vishwanath, V., Lukić, Z., Sehrish, S. & Liao, W. K., Aug 3 2016, In : New Astronomy. 42, p. 49-65 17 p.

Research output: Contribution to journalArticle

Cosmology
cosmology
hardware
Supercomputers
supercomputers
2015
11 Citations (Scopus)

Fast algorithms for the maximum clique problem on massive graphs with applications to overlapping community detection

Pattabiraman, B., Patwary, M. M. A., Gebremedhin, A. H., Liao, W. K. & Choudhary, A., Jan 1 2015, In : Internet Mathematics. 11, 4, p. 421-448 28 p.

Research output: Contribution to journalArticle

Maximum Clique Problem
Community Detection
Fast Algorithm
Overlapping
Exact Algorithms

IOPro: a parallel I/O profiling and visualization framework for high-performance storage systems

Kim, S. J., Zhang, Y., Son, S. W., Kandemir, M., Liao, W. K., Thakur, R. & Choudhary, A., Jan 1 2015, In : Journal of Supercomputing. 71, 3, p. 840-870 31 p.

Research output: Contribution to journalArticle

HPSS
Parallel I/O
Storage System
Profiling
Visualization
2014
15 Citations (Scopus)

Data compression for the exascale computing era - survey

Son, S. W., Chen, Z., Hendrix, W., Agrawal, A., Liao, W-K. & Choudhary, A. N., Jan 1 2014, In : Supercomputing Frontiers and Innovations. 1, 2, p. 76-88 13 p.

Research output: Contribution to journalArticle

Data compression
Data reduction
Costs
7 Citations (Scopus)

High performance data clustering: A comparative analysis of performance for GPU, RASC, MPI, and OpenMP implementations

Yang, L., Chiu, S. C., Liao, W-K. & Thomas, M. A., Oct 1 2014, In : Journal of Supercomputing. 70, 1, p. 284-300 17 p.

Research output: Contribution to journalArticle

Data Clustering
OpenMP
Comparative Analysis
Field programmable gate arrays (FPGA)
High Performance

Randomized Algorithm for Approximate Nearest Neighbor Search in High Dimensions

Buaba, R., Homaifar, A., Hendrix, W., Son, S. W., Liao, W-K. & Choudhary, A. N., 2014, In : Journal of Pattern Recognition Research. 9, 1

Research output: Contribution to journalArticle

Open Access
Normal distribution
Data structures
Nearest neighbor search
Data storage equipment
17 Citations (Scopus)

Toward enhanced understanding and projections of climate extremes using physics-guided data mining techniques

Ganguly, A. R., Kodra, E. A., Agrawal, A., Banerjee, A., Boriah, S., Chatterjee, S. N., Chatterjee, S. O., Choudhary, A., Das, D., Faghmous, J., Ganguli, P., Ghosh, S., Hayhoe, K., Hays, C., Hendrix, W., Fu, Q., Kawale, J., Kumar, D., Kumar, V., Liao, W. & 9 others, Liess, S., Mawalagedara, R., Mithal, V., Oglesby, R., Salvi, K., Snyder, P. K., Steinhaeuser, K., Wang, D. & Wuebbles, D., Jan 1 2014, In : Nonlinear Processes in Geophysics. 21, 4, p. 777-795 19 p.

Research output: Contribution to journalArticle

data mining
climate
Data mining
physics
Physics
2013
33 Citations (Scopus)

A parallel monte carlo code for simulating collisional N-body systems

Pattabiraman, B., Umbreit, S., Liao, W-K., Choudhary, A. N., Kalogera, V., Memik, G. & Rasio, F. A., Feb 1 2013, In : Astrophysical Journal, Supplement Series. 204, 2, 15.

Research output: Contribution to journalArticle

sorting algorithms
central processing units
sorting
communication
random numbers
2012
23 Citations (Scopus)

A case study for scientific I/O: Improving the FLASH astrophysics code

Latham, R., Daley, C., Liao, W. K., Gao, K., Ross, R., Dubey, A. & Choudhary, A., Jan 1 2012, In : Computational Science and Discovery. 5, 1, 015001.

Research output: Contribution to journalArticle

Astrophysics
astrophysics
output
Output
Thermonuclear reactions
16 Citations (Scopus)

Accelerating pairwise statistical significance estimation for local alignment by harvesting GPU's power.

Zhang, Y., Misra, S., Agrawal, A., Patwary, M. M. A., Liao, W. K., Qin, Z. & Choudhary, A., 2012, In : BMC bioinformatics. 13 Suppl 5, p. S3

Research output: Contribution to journalArticle

Sequence Alignment
Statistical Significance
Harvesting
Pairwise
Alignment
13 Citations (Scopus)

Delegation-based I/O mechanism for high performance computing systems

Nisar, A., Liao, W-K. & Choudhary, A. N., Jan 1 2012, In : IEEE Transactions on Parallel and Distributed Systems. 23, 2, p. 271-279 9 p., 6087361.

Research output: Contribution to journalArticle

Software design
Parallel processing systems
Large scale systems
Synchronization
Servers
5 Citations (Scopus)

Par-PSSE: Software for Pairwise statistical significance estimation in parallel for local sequence alignment

Zhang, Y., Patwary, M. M. A., Misra, S., Agrawal, A., Liao, W. K., Qin, Z. & Choudhary, A., Mar 1 2012, In : International Journal of Digital Content Technology and its Applications. 6, 5, p. 200-208 9 p.

Research output: Contribution to journalArticle

Scalability
Accidents
Substitution reactions
59 Citations (Scopus)

Social media evolution of the egyptian revolution

Choudhary, A. N., Hendrix, W., Lee, K., Palsetia, D. & Liao, W-K., May 1 2012, In : Communications of the ACM. 55, 5, p. 74-80 7 p.

Research output: Contribution to journalArticle

2011
17 Citations (Scopus)

Anatomy of a hash-based long read sequence mapping algorithm for next generation DNA sequencing

Misra, S., Agrawal, A., Liao, W. K. & Choudhary, A., Jan 1 2011, In : Bioinformatics. 27, 2, p. 189-195 7 p., btq648.

Research output: Contribution to journalArticle

DNA Sequencing
Anatomy
DNA Sequence Analysis
DNA
Genome
10 Citations (Scopus)
Bandwidth
Costs
Experiments
2010
9 Citations (Scopus)

A scalable message passing interface implementation of an Ad-Hoc parallel I/o system

Isaila, F., Garcia Blas, F. J., Carretero, J., Liao, W. K. & Choudhary, A., May 1 2010, In : International Journal of High Performance Computing Applications. 24, 2, p. 164-184 21 p.

Research output: Contribution to journalArticle

Message Passing Interface
Parallel I/O
Message passing
Storage management
Cache
8 Citations (Scopus)

High utility itemsets mining

Liu, Y., Li, J., Liao, W-K., Choudhary, A. N. & Shi, Y., Nov 1 2010, In : International Journal of Information Technology and Decision Making. 9, 6, p. 905-934 30 p.

Research output: Contribution to journalArticle

Decision making
Data storage equipment
Web services
Marketing
Costs
2009
356 Citations (Scopus)

Terascale direct numerical simulations of turbulent combustion using S3D

Chen, J. H., Choudhary, A. N., De Supinski, B., Devries, M., Hawkes, E. R., Klasky, S., Liao, W-K., Ma, K. L., Mellor-Crummey, J., Podhorszki, N., Sankaran, R., Shende, S. & Yoo, C. S., Jul 23 2009, In : Computational Science and Discovery. 2, 1, 015001.

Research output: Contribution to journalArticle

Turbulent Combustion
turbulent combustion
Direct numerical simulation
Flame
direct numerical simulation
2007
8 Citations (Scopus)

Cooperative client-side file caching for MPI applications

Liao, W. K., Coloma, K., Choudhary, A. & Ward, L., May 1 2007, In : International Journal of High Performance Computing Applications. 21, 2, p. 144-154 11 p.

Research output: Contribution to journalArticle

Caching
Thread
Parallel I/O
Parallel File System
File System
2006

Distributed smart disks for I/O-intensive workloads on switched interconnects

Chiu, S. C., Liao, W-K. & Choudhary, A. N., Apr 1 2006, In : Future Generation Computer Systems. 22, 5, p. 643-656 14 p.

Research output: Contribution to journalArticle

Interfaces (computer)
Association rules
Switching networks
Fast Fourier transforms
Scalability
5 Citations (Scopus)

Multicollective I/O: A technique for exploiting inter-file access patterns

Memik, G., Kandemir, M. T., Liao, W-K. & Choudhary, A. N., Aug 1 2006, In : ACM Transactions on Storage. 2, 3, p. 349-369 21 p.

Research output: Contribution to journalArticle

Parallel processing systems
Computational complexity
11 Citations (Scopus)

Scalable design and implementations for MPI parallel overlapping I/O

Liao, W. K., Coloma, K., Choudhary, A., Ward, L., Russell, E. & Pundit, N., Nov 1 2006, In : IEEE Transactions on Parallel and Distributed Systems. 17, 11, p. 1264-1276 13 p.

Research output: Contribution to journalArticle

Message passing
Coloring
Servers
Communication
2005
15 Citations (Scopus)

Performance evaluation of a parallel pipeline computational model for Space-Time Adaptive Processing

Liao, W. K., Choudhary, A., Weiner, D. & Varshney, P., Feb 1 2005, In : Journal of Supercomputing. 31, 2, p. 137-160 24 p.

Research output: Contribution to journalArticle

Space time adaptive processing
Computational Model
Performance Evaluation
Pipelines
Space-time
2004
6 Citations (Scopus)

Evaluating structured I/O methods for parallel file systems

Ching, A., Choudhary, A., Liao, W. K., Ross, R. & Gropp, W., Jan 1 2004, In : International Journal of High Performance Computing and Networking. 2, 2-4, p. 133-145 13 p.

Research output: Contribution to journalArticle

Application programming interfaces (API)
Interfaces (computer)
Processing
3 Citations (Scopus)
Embedded Processor
Performance Model
Workload
Performance Evaluation
Processing
2003
7 Citations (Scopus)

A high-performance application data environment for large-scale scientific computations

Shen, X., Liao, W-K., Choudhary, A. N., Memik, G. & Kandemir, M., Dec 1 2003, In : IEEE Transactions on Parallel and Distributed Systems. 14, 12, p. 1262-1274 13 p.

Research output: Contribution to journalArticle

Information management
Storage management
Data storage equipment
Parallel architectures
2000

Data management for large-scale scientific computations in high performance distributed systems

Choudhary, A., Kandemir, M., No, J., Memik, G., Shen, X., Liao, W., Nagesh, H., More, S., Taylor, V., Thakur, R. & Stevens, R., 2000, In : Cluster Computing. 3, p. 45-60

Research output: Contribution to journalArticle

Information management
Metadata
User interfaces
15 Citations (Scopus)

Design, implementation and evaluation of parallel pipelined STAP on parallel computers

Choudhary, A., Liao, W. K., Weiner, D., Varshney, P., Linderman, R., Linderman, M. & Brown, R., Dec 3 2000, In : IEEE Transactions on Aerospace and Electronic Systems. 36, 2, p. 528-548 21 p.

Research output: Contribution to journalArticle

Space time adaptive processing
Throughput
Communication
Space time adaptive processing
Pipelines
Scalability
Merging
Throughput
1996
3 Citations (Scopus)
Plasma simulation
Electromagnetic fields
Communication