Yinan Zheng

  • 621 Citations
20122024

Research output per year

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Research Output

  • 621 Citations
  • 43 Article
  • 1 Comment/debate
2020

Epigenomic analysis of 5-hydroxymethylcytosine (5hmC) reveals novel DNA methylation markers for lung cancers

Wang, Z., Du, M., Yuan, Q., Guo, Y., Hutchinson, J. N., Su, L., Zheng, Y., Wang, J., Mucci, L. A., Lin, X., Hou, L. & Christiani, D. C., Mar 2020, In : Neoplasia (United States). 22, 3, p. 154-161 8 p.

Research output: Contribution to journalArticle

Open Access
2019

A peripheral blood DNA methylation signature of hepatic fat reveals a potential causal pathway for nonalcoholic fatty liver disease

Ma, J., Nano, J., Ding, J., Zheng, Y., Hennein, R., Liu, C., Speliotes, E. K., Huan, T., Song, C., Mendelson, M. M., Joehanes, R., Long, M. T., Liang, L., Smith, J. A., Reynolds, L. M., Ghanbari, M., Muka, T., Van Meurs, J. B. J., Alferink, L. J. M., Franco, O. H. & 17 others, Dehghan, A., Ratliff, S., Zhao, W., Bielak, L., Kardia, S. L. R., Peyser, P. A., Ning, H., VanWagner, L. B., Lloyd-Jones, D. M., Carr, J. J., Greenland, P., Lichtenstein, A. H., Hu, F. B., Liu, Y., Hou, L., Murad, S. D. & Levy, D., Jan 1 2019, In : Diabetes. 68, 5, p. 1073-1083 11 p.

Research output: Contribution to journalArticle

1 Scopus citations

Association of cord blood methylation with neonatal leptin: An epigenome wide association study

Kadakia, R., Zheng, Y., Zhang, Z., Zhang, W., Josefson, J. L. & Hou, L., Jan 1 2019, In : PloS one. 14, 12, e0226555.

Research output: Contribution to journalArticle

Open Access

Comparative validation of an epigenetic mortality risk score with three aging biomarkers for predicting mortality risks among older adult males

Gao, X., Colicino, E., Shen, J., Just, A. C., Nwanaji-Enwerem, J. C., Wang, C., Coull, B., Lin, X., Vokonas, P., Zheng, Y., Hou, L., Schwartz, J. & Baccarelli, A. A., Dec 1 2019, In : International journal of epidemiology. 48, 6, p. 1958-1971 14 p.

Research output: Contribution to journalArticle

2 Scopus citations

Correction: Accelerated DNA methylation age and the use of antihypertensive medication among older adults [Aging, (Albany NY), 10, (2018), (3210-3228)] doi: 10.18632/aging.10162

Gao, X., Colicino, E., Shen, J., Just, A. C., Nwanaji-Enwerem, J. C., Coull, B., Lin, X., Vokonas, P., Zheng, Y., Hou, L., Schwartz, J. & Baccarelli, A. A., May 15 2019, In : Aging. 11, 9, 1 p.

Research output: Contribution to journalComment/debate

DNA methylation of individual repetitive elements in hepatitis C virus infection-induced hepatocellular carcinoma

Zheng, Y., Hlady, R. A., Joyce, B. T., Robertson, K. D., He, C., Nannini, D. R., Kibbe, W. A., Achenbach, C. J., Murphy, R. L., Roberts, L. R. & Hou, L., Oct 21 2019, In : Clinical Epigenetics. 11, 1, 145.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Epigenetic age acceleration and metabolic syndrome in the coronary artery risk development in young adults study

Nannini, D. R., Joyce, B. T., Zheng, Y., Gao, T., Liu, L., Yoon, G., Huan, T., Ma, J., Jacobs, D. R., Wilkins, J. T., Ren, J., Zhang, K., Khan, S. S., Allen, N. B., Horvath, S., Lloyd-Jones, D. M., Greenland, P. & Hou, L., Nov 15 2019, In : Clinical Epigenetics. 11, 1, 160.

Research output: Contribution to journalArticle

Open Access

Impacts of air pollution, temperature, and relative humidity on leukocyte distribution: An epigenetic perspective

Gao, X., Colicino, E., Shen, J., Kioumourtzoglou, M. A., Just, A. C., Nwanaji-Enwerem, J. C., Coull, B., Lin, X., Vokonas, P., Zheng, Y., Hou, L., Schwartz, J. & Baccarelli, A. A., May 2019, In : Environment International. 126, p. 395-405 11 p.

Research output: Contribution to journalArticle

Open Access
9 Scopus citations

Smoking-related DNA methylation is associated with DNA methylation phenotypic age acceleration: The veterans affairs normative aging study

Yang, Y., Gao, X., Just, A. C., Colicino, E., Wang, C., Coull, B. A., Hou, L., Zheng, Y., Vokonas, P., Schwartz, J. & Baccarelli, A. A., Jul 1 2019, In : International journal of environmental research and public health. 16, 13, 2356.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations
2018

Accelerated DNA methylation age and the use of antihypertensive medication among older adults

Gao, X., Colicino, E., Shen, J., Just, A. C., Nwanaji-Enwerem, J. C., Coull, B., Lin, X., Vokonas, P., Zheng, Y., Hou, L., Schwartz, J. & Baccarelli, A. A., Nov 1 2018, In : Aging. 10, 11, p. 3210-3228 19 p.

Research output: Contribution to journalArticle

2 Scopus citations

DNA methylation in blood as a mediator of the association of mid-childhood body mass index with cardio-metabolic risk score in early adolescence

Huang, J. V., Cardenas, A., Colicino, E., Schooling, C. M., Rifas-Shiman, S. L., Agha, G., Zheng, Y., Hou, L., Just, A. C., Litonjua, A. A., DeMeo, D. L., Lin, X., Oken, E., Hivert, M. F. & Baccarelli, A. A., Nov 2 2018, In : Epigenetics. 13, 10-11, p. 1072-1087 16 p.

Research output: Contribution to journalArticle

4 Scopus citations

DNA methylation of telomere-related genes and cancer risk

Joyce, B. T., Zheng, Y., Nannini, D., Zhang, Z., Liu, L., Gao, T., Kocherginsky, M., Murphy, R., Yang, H., Achenbach, C. J., Roberts, L. R., Hoxha, M., Shen, J., Vokonas, P., Schwartz, J., Baccarelli, A. & Hou, L., Aug 2018, In : Cancer Prevention Research. 11, 8, p. 511-522 12 p.

Research output: Contribution to journalArticle

4 Scopus citations

Metastable DNA methylation sites associated with longitudinal lung function decline and aging in humans: an epigenome-wide study in the NAS and KORA cohorts

Carmona, J. J., Barfield, R. T., Panni, T., Nwanaji-Enwerem, J. C., Just, A. C., Hutchinson, J. N., Colicino, E., Karrasch, S., Wahl, S., Kunze, S., Jafari, N., Zheng, Y., Hou, L., DeMeo, D. L., Litonjua, A. A., Vokonas, P. S., Peters, A., Lin, X., Schwartz, J., Schulz, H. & 1 others, Baccarelli, A. A., Nov 2 2018, In : Epigenetics. 13, 10-11, p. 1039-1055 17 p.

Research output: Contribution to journalArticle

2 Scopus citations

MiRNA-processing gene methylation and cancer risk

Joyce, B. T., Zheng, Y., Zhang, Z., Liu, L., Kocherginsky, M., Murphy, R., Achenbach, C. J., Musa, J., Wehbe, F., Just, A., Shen, J., Vokonas, P., Schwartz, J., Baccarelli, A. A. & Hou, L., May 2018, In : Cancer Epidemiology Biomarkers and Prevention. 27, 5, p. 550-557 8 p.

Research output: Contribution to journalArticle

3 Scopus citations

Promoter methylation of PGC1A and PGC1B predicts cancer incidence in a veteran cohort

Kresovich, J. K., Joyce, B. T., Gao, T., Zheng, Y., Zhang, Z., Achenbach, C. J., Murphy, R. L., Just, A. C., Shen, J., Yang, H., Vokonas, P., Schwartz, J., Baccarelli, A. A. & Hou, L., Jun 2018, In : Epigenomics. 10, 6, p. 733-743 11 p.

Research output: Contribution to journalArticle

4 Scopus citations
2017

Blood pressure and expression of microRNAs in whole blood

Zhang, Z., Joyce, B. T., Kresovich, J. K., Zheng, Y., Zhong, J., Patel, R., Zhang, W., Liu, L., Dou, C., McCracken, J. P., DõÂaz, A., Motta, V., Sanchez-Guerra, M., Bian, S., Bertazzi, P. A., Schwartz, J., Baccarelli, A. A., Wang, S. & Hou, L., Mar 2017, In : PloS one. 12, 3, e0173550.

Research output: Contribution to journalArticle

6 Scopus citations

Cord blood DNA methylation and adiposity measures in early and mid-childhood

Kresovich, J. K., Zheng, Y., Cardenas, A., Joyce, B. T., Rifas-Shiman, S. L., Oken, E., Gillman, M. W., Hivert, M. F., Baccarelli, A. A. & Hou, L., Aug 15 2017, In : Clinical Epigenetics. 9, 1, 86.

Research output: Contribution to journalArticle

5 Scopus citations

Histone 3 modifications and blood pressure in the Beijing Truck Driver Air Pollution Study

Kresovich, J. K., Zhang, Z., Fang, F., Zheng, Y., Sanchez-Guerra, M., Joyce, B. T., Zhong, J., Chervona, Y., Wang, S., Chang, D., McCracken, J. P., Díaz, A., Bonzini, M., Carugno, M., Koutrakis, P., Kang, C. M., Bian, S., Gao, T., Byun, H. M., Schwartz, J. & 2 others, Baccarelli, A. A. & Hou, L., Aug 18 2017, In : Biomarkers. 22, 6, p. 584-593 10 p.

Research output: Contribution to journalArticle

4 Scopus citations

Maternal pre-pregnancy BMI downregulates neonatal cord blood LEP methylation

Kadakia, R., Zheng, Y., Zhang, Z., Zhang, W., Hou, L. & Josefson, J. L., Aug 2017, In : Pediatric Obesity. 12, p. 57-64 8 p.

Research output: Contribution to journalArticle

15 Scopus citations

MicroRNA Expression in Ethnic Specific Early Stage Breast Cancer: An Integration and Comparative Analysis

Nassar, F. J., Talhouk, R., Zgheib, N. K., Tfayli, A., El Sabban, M., El Saghir, N. S., Boulos, F., Jabbour, M. N., Chalala, C., Boustany, R. M., Kadara, H., Zhang, Z., Zheng, Y., Joyce, B., Hou, L., Bazarbachi, A., Calin, G. & Nasr, R., Dec 1 2017, In : Scientific reports. 7, 1, 16829.

Research output: Contribution to journalArticle

2 Scopus citations

Prediction of genome-wide DNA methylation in repetitive elements

Zheng, Y., Joyce, B. T., Liu, L., Zhang, Z., Kibbe, W. A., Zhang, W. & Hou, L., Sep 1 2017, In : Nucleic acids research. 45, 15, p. 8697-8711 15 p.

Research output: Contribution to journalArticle

14 Scopus citations

Regularized estimation in sparse high-dimensional multivariate regression, with application to a DNA methylation study

Zhang, H., Zheng, Y., Yoon, G., Zhang, Z., Gao, T., Joyce, B., Zhang, W., Schwartz, J., Vokonas, P., Colicino, E., Baccarelli, A., Hou, L. & Liu, L., Jul 26 2017, In : Statistical Applications in Genetics and Molecular Biology. 16, 3, p. 159-171 13 p.

Research output: Contribution to journalArticle

2 Scopus citations

Traffic-derived particulate matter exposure and histone H3 modification: A repeated measures study

Zheng, Y., Sanchez-Guerra, M., Zhang, Z., Joyce, B. T., Zhong, J., Kresovich, J. K., Liu, L., Zhang, W., Gao, T., Chang, D., Osorio-Yanez, C., Carmona, J. J., Wang, S., McCracken, J. P., Zhang, X., Chervona, Y., Díaz, A., Bertazzi, P. A., Koutrakis, P., Kang, C. M. & 3 others, Schwartz, J., Baccarelli, A. A. & Hou, L., Feb 1 2017, In : Environmental Research. 153, p. 112-119 8 p.

Research output: Contribution to journalArticle

15 Scopus citations

Ultra-high dimensional variable selection with application to normative aging study: DNA methylation and metabolic syndrome

Yoon, G., Zheng, Y., Zhang, Z., Zhang, H., Gao, T., Joyce, B., Zhang, W., Guan, W., Baccarelli, A. A., Jiang, W., Schwartz, J., Vokonas, P. S., Hou, L. & Liu, L., Mar 7 2017, In : BMC bioinformatics. 18, 1, 156.

Research output: Contribution to journalArticle

2 Scopus citations
2016

Blood Epigenetic Age may Predict Cancer Incidence and Mortality

Zheng, Y., Joyce, B. T., Colicino, E., Liu, L., Zhang, W., Dai, Q., Shrubsole, M. J., Kibbe, W. A., Gao, T., Zhang, Z., Jafari, N., Vokonas, P., Schwartz, J., Baccarelli, A. A. & Hou, L., Mar 1 2016, In : EBioMedicine. 5, p. 68-73 6 p.

Research output: Contribution to journalArticle

56 Scopus citations

DNA methylation of oxidative stress genes and cancer risk in the Normative Aging Study

Gao, T., Joyce, B. T., Liu, L., Zheng, Y., Dai, Q., Zhang, Z., Zhang, W., Shrubsole, M. J., Tao, M. H., Schwartz, J., Baccarelli, A. & Hou, L., Jan 1 2016, In : American Journal of Cancer Research. 6, 2, p. 553-561 9 p.

Research output: Contribution to journalArticle

7 Scopus citations

Estimating and testing high-dimensional mediation effects in epigenetic studies

Zhang, H., Zheng, Y., Zhang, Z., Gao, T., Joyce, B., Yoon, G., Zhang, W., Schwartz, J., Just, A., Colicino, E., Vokonas, P., Zhao, L., Lv, J., Baccarelli, A., Hou, L. & Liu, L., Oct 15 2016, In : Bioinformatics. 32, 20, p. 3150-3154 5 p.

Research output: Contribution to journalArticle

20 Scopus citations

Genetics and population analysis: Estimating and testing high-dimensional mediation effects in epigenetic studies

Zhang, H., Zheng, Y., Zhang, Z., Gao, T., Joyce, B., Yoon, G., Zhang, W., Schwartz, J., Just, A., Colicino, E., Vokonas, P., Zhao, L., Lv, J., Baccarelli, A., Hou, L. & Liu, L., Oct 15 2016, In : Bioinformatics. 32, 20, p. 1-5 5 p.

Research output: Contribution to journalArticle

Linking short tandem repeat polymorphisms with cytosine modifications in human lymphoblastoid cell lines

Zhang, Z., Zheng, Y., Zhang, X., Liu, C., Joyce, B. T., Kibbe, W. A., Hou, L. & Zhang, W., Feb 1 2016, In : Human Genetics. 135, 2, p. 223-232 10 p.

Research output: Contribution to journalArticle

2 Scopus citations

Particulate air pollution exposure and expression of viral and human MicroRNAs in blood: The beijing truck driver air pollution study

Hou, L., Barupal, J., Zhang, W., Zheng, Y., Liu, L., Zhang, X., Dou, C., McCracken, J. P., Díaz, A., Motta, V., Sanchez-Guerra, M., Wolf, K. R., Bertazzi, P. A., Schwartz, J. D., Wang, S. & Baccarelli, A. A., Mar 2016, In : Environmental health perspectives. 124, 3, p. 344-350 7 p.

Research output: Contribution to journalArticle

16 Scopus citations

Prospective changes in global DNA methylation and cancer incidence and mortality

Joyce, B. T., Gao, T., Zheng, Y., Liu, L., Zhang, W., Dai, Q., Shrubsole, M. J., Hibler, E. A., Cristofanilli, M., Zhang, H., Yang, H., Vokonas, P., Cantone, L., Schwartz, J., Baccarelli, A. & Hou, L., Aug 9 2016, In : British Journal of Cancer. 115, 4, p. 465-472 8 p.

Research output: Contribution to journalArticle

18 Scopus citations
2015

Blood Telomere Length Attrition and Cancer Development in the Normative Aging Study Cohort

Hou, L., Joyce, B. T., Gao, T., Liu, L., Zheng, Y., Penedo, F. J., Liu, S., Zhang, W., Bergan, R., Dai, Q., Vokonas, P., Hoxha, M., Schwartz, J. & Baccarelli, A., Jun 1 2015, In : EBioMedicine. 2, 6, p. 591-596 6 p.

Research output: Contribution to journalArticle

39 Scopus citations

Characterization of genome-wide H3K27ac profiles reveals a distinct PM2.5-associated histone modification signature

Liu, C., Xu, J., Chen, Y., Guo, X., Zheng, Y., Wang, Q., Chen, Y., Ni, Y., Zhu, Y., Joyce, B. T., Baccarelli, A., Deng, F., Zhang, W. & Hou, L., Aug 15 2015, In : Environmental Health: A Global Access Science Source. 14, 1, 65.

Research output: Contribution to journalArticle

15 Scopus citations

Effects of particulate matter exposure on blood 5-hydroxymethylation: Results from the Beijing truck driver air pollution study

Sanchez-Guerra, M., Zheng, Y., Osorio-Yanez, C., Zhong, J., Chervona, Y., Wang, S., Chang, D., McCracken, J. P., Díaz, A., Bertazzi, P. A., Koutrakis, P., Kang, C. M., Zhang, X., Zhang, W., Byun, H. M., Schwartz, J., Hou, L. & Baccarelli, A. A., Jan 1 2015, In : Epigenetics. 10, 7, p. 633-642 10 p.

Research output: Contribution to journalArticle

36 Scopus citations

Longitudinal study of DNA methylation of inflammatory genes and cancer risk

Joyce, B. T., Gao, T., Liu, L., Zheng, Y., Liu, S., Zhang, W., Penedo, F. J., Dai, Q., Schwartz, J., Baccarelli, A. A. & Hou, L., Oct 1 2015, In : Cancer Epidemiology Biomarkers and Prevention. 24, 10, p. 1531-1538 8 p.

Research output: Contribution to journalArticle

15 Scopus citations
2014

Air pollution exposure and lung function in highly exposed subjects in Beijing, China: A repeated-measure study

Baccarelli, A. A., Zheng, Y., Zhang, X., Chang, D., Liu, L., Wolf, K. R., Zhang, Z., McCracken, J. P., Díaz, A., Bertazzi, P. A., Schwartz, J., Wang, S., Kang, C. M., Koutrakis, P. & Hou, L., Oct 2 2014, In : Particle and Fibre Toxicology. 11, 1, 51.

Research output: Contribution to journalArticle

38 Scopus citations

Altered methylation in tandem repeat element and elemental component levels in inhalable air particles

Hou, L., Zhang, X., Zheng, Y., Wang, S., Dou, C., Guo, L., Byun, H. M., Motta, V., Mccracken, J., Díaz, A., Kang, C. M., Koutrakis, P., Bertazzi, P. A., Li, J., Schwartz, J. & Baccarelli, A. A., Apr 1 2014, In : Environmental and Molecular Mutagenesis. 55, 3, p. 256-265 10 p.

Research output: Contribution to journalArticle

34 Scopus citations

Blood methylomics in response to arsenic exposure in a low-exposed US population

Liu, X., Zheng, Y., Zhang, W., Zhang, X., Lioyd-Jones, D. M., Baccarelli, A. A., Ning, H., Fornage, M., He, K., Liu, K. & Hou, L., Mar 1 2014, In : Journal of Exposure Science and Environmental Epidemiology. 24, 2, p. 145-149 5 p.

Research output: Contribution to journalArticle

15 Scopus citations

Effects of short-term exposure to inhalable particulate matter on DNA methylation of tandem repeats

Guo, L., Byun, H. M., Zhong, J., Motta, V., Barupal, J., Zheng, Y., Dou, C., Zhang, F., McCracken, J. P., Diaz, A., Marco, S. G., Colicino, S., Schwartz, J., Wang, S., Hou, L. & Baccarelli, A. A., May 2014, In : Environmental and Molecular Mutagenesis. 55, 4, p. 322-335 14 p.

Research output: Contribution to journalArticle

40 Scopus citations

PGS: A tool for association study of high-dimensional microRNA expression data with repeated measures

Zheng, Y., Fei, Z., Zhang, W., Starren, J. B., Liu, L., Baccarelli, A. A., Li, Y. & Hou, L., Apr 2 2014, In : Bioinformatics. 30, 19, p. 2802-2807 6 p.

Research output: Contribution to journalArticle

5 Scopus citations
2013

Inhalable particulate matter and mitochondrial DNA copy number in highly exposed individuals in Beijing, China: A repeated-measure study

Hou, L., Zhang, X., Dioni, L., Barretta, F., Dou, C., Zheng, Y., Hoxha, M., Bertazzi, P. A., Schwartz, J., Wu, S., Wang, S. & Baccarelli, A. A., Apr 29 2013, In : Particle and Fibre Toxicology. 10, 1, 17.

Research output: Contribution to journalArticle

50 Scopus citations

Modeling the initial transmission dynamics of influenza A H1N1 in Guangdong Province, China

Tan, X., Yuan, L., Zhou, J., Zheng, Y. & Yang, F., Jul 1 2013, In : International Journal of Infectious Diseases. 17, 7, p. e479-e484

Research output: Contribution to journalArticle

12 Scopus citations
2012

Air pollution exposure and telomere length in highly exposed subjects in Beijing, China: A repeated-measure study

Hou, L., Wang, S., Dou, C., Zhang, X., Yu, Y., Zheng, Y., Avula, U., Hoxha, M., Díaz, A., McCracken, J., Barretta, F., Marinelli, B., Bertazzi, P. A., Schwartz, J. & Baccarelli, A. A., Nov 1 2012, In : Environment International. 48, p. 71-77 7 p.

Research output: Contribution to journalArticle

75 Scopus citations

Genome-wide study of DNA methylation alterations in response to diazinon exposure in vitro

Zhang, X., Wallace, A. D., Du, P., Lin, S., Baccarelli, A. A., Jiang, H., Jafari, N., Zheng, Y., Xie, H., Soares, M. B., Kibbe, W. A. & Hou, L., Nov 1 2012, In : Environmental Toxicology and Pharmacology. 34, 3, p. 959-968 10 p.

Research output: Contribution to journalArticle

30 Scopus citations