Find Research Outputs

2019

Automatic characterization of plaques and tissue in IVOCT images using a multi-step convolutional neural network framework

Cheimariotis, G. A., Riga, M., Toutouzas, K., Tousoulis, D., Katsaggelos, A. & Maglaveras, N., Jan 1 2019, In : IFMBE Proceedings. 68, 1, p. 261-265 5 p.

Research output: Contribution to journalConference article

Water recycling
Optical tomography
Tissue
Neural networks
Lipids

Dendritic mechanisms of hippocampal place field formation

Sheffield, M. EJ. & Dombeck, D. A., Feb 1 2019, In : Current Opinion in Neurobiology. 54, p. 1-11 11 p.

Research output: Contribution to journalReview article

Hippocampus
Brain
Research
Place Cells
Transgender Persons
Urinalysis
Cannabis
Screening
Pharmaceutical Preparations

Spatial ability for university biology education

Castro-Alonso, J. C. & Uttal, D. H., Jan 1 2019, Advances in Human Factors in Training, Education, and Learning Sciences - Proceedings of the AHFE 2018 International Conference on Human Factors in Training, Education, and Learning Sciences, 2018. Springer Verlag, p. 283-291 9 p. (Advances in Intelligent Systems and Computing; vol. 785)

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Education
Visualization
Experiments

Systemic and Pulmonary Venous Abnormalities.

Johnson, J., Patel, A., Reilly, B. & Rigsby, C., 2019, Caffey’s Pediatric Diagnostic Imaging, 13thEdition.. Coley, B. (ed.). Philadelphia, PA: Elsevier Saunders

Research output: Chapter in Book/Report/Conference proceedingChapter

When a speaker is reported as having said so

Goldberg, S. C. Jan 1 2019 Perspectives in Pragmatics, Philosophy and Psychology. Springer International Publishing, p. 133-147 15 p. (Perspectives in Pragmatics, Philosophy and Psychology; vol. 19)

Research output: Chapter in Book/Report/Conference proceedingChapter

Semantics
semantics
say
speech act
Illegitimacy
2018

(Anti-)egalitarianism differentially predicts empathy for members of advantaged versus disadvantaged groups

Lucas, B. J. & Kteily, N. S., May 1 2018, In : Journal of Personality and Social Psychology. 114, 5, p. 665-692 28 p.

Research output: Contribution to journalArticle

egalitarianism
Vulnerable Populations
empathy
Group
Social Hierarchy

(Can't Get No) Patient Satisfaction the Predictive Power of Demographic, GI, and Psychological Factors in IBS Patients

Quigley, B. M., Sova, C. C., Brenner, D. M., Keefer, L. A., Sitrin, M. D., Radziwon, C. D., Krasner, S. S. & Lackner, J. M., Aug 1 2018, In : Journal of Clinical Gastroenterology. 52, 7, p. 614-621 8 p.

Research output: Contribution to journalArticle

Irritable Bowel Syndrome
Patient Satisfaction
Demography
Psychology
Routine Diagnostic Tests

(Dis)Engagement matters: Identifying efficacious learning practices with multimodal learning analytics

Worsley, M. Mar 7 2018 Proceedings of the 8th International Conference on Learning Analytics and Knowledge: Towards User-Centred Learning Analytics, LAK 2018. Association for Computing Machinery, p. 365-369 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Students
Decision trees
Education
Image coding
Learning systems

[18F]Fluciclovine PET discrimination between high- and low-grade gliomas

Parent, E. E., Benayoun, M., Ibeanu, I., Olson, J. J., Hadjipanayis, C. G., Brat, D. J., Adhikarla, V., Nye, J., Schuster, D. M. & Goodman, M. M., Jan 1 2018, In : EJNMMI Research. 8, 67

Research output: Contribution to journalArticle

Glioma
Neoplasms
Brain
1-amino-3-fluorocyclobutane-1-carboxylic acid
Sensitivity and Specificity

#Alzheimer’s and dementia

Danilovich, M. K., Tsay, J., Al-Bahrani, R., Choudhary, A. & Agrawal, A., Jan 1 2018, In : Topics in Geriatric Rehabilitation. 34, 1, p. 48-53 6 p.

Research output: Contribution to journalArticle

Alzheimer Disease
Social Support
Memory Disorders
Social Work
Caregivers
1 Citations

18F-FDG PET/CT for Monitoring Response of Merkel Cell Carcinoma to the Novel Programmed Cell Death Ligand 1 Inhibitor Avelumab

Eshghi, N., Lundeen, T. F., Mackinnon, L., Avery, R. & Kuo, P. H., May 1 2018, In : Clinical Nuclear Medicine. 43, 5, p. e142-e144

Research output: Contribution to journalArticle

Merkel Cell Carcinoma
Fluorodeoxyglucose F18
Cell Death
Neoplasm Metastasis
Ligands

18F-FDG PET biomarkers help detect early metabolic response to irreversible electroporation and predict therapeutic outcomes in a rat liver tumor model

Wang, X., Su, Z., Lyu, T., Figini, M., Procissi, D., Shangguan, J., Sun, C., Wang, B., Shang, N., Gu, S., Ma, Q., Gordon, A. C., Lin, K., Wang, J., Lewandowski, R. J., Salem, R., Yaghmai, V., Larson, A. C. & Zhang, Z., Apr 1 2018, In : Radiology. 287, 1, p. 137-145 9 p.

Research output: Contribution to journalArticle

Electroporation
Fluorodeoxyglucose F18
Positron-Emission Tomography
Biomarkers
Liver
2 Citations

2015 American College of Rheumatology Workforce Study: Supply and Demand Projections of Adult Rheumatology Workforce, 2015–2030

Battafarano, D. F., Ditmyer, M., Bolster, M. B., Fitzgerald, J. D., Deal, C., Bass, A. R., Molina, R., Erickson, A. R., Hausmann, J. S., Klein-Gitelman, M., Imundo, L. F., Smith, B. J., Jones, K., Greene, K. & Monrad, S. U., Apr 1 2018, In : Arthritis Care and Research. 70, 4, p. 617-626 10 p.

Research output: Contribution to journalArticle

Rheumatology
Demography
Physician Assistants
Geography
Nurse Practitioners

2016 Children's Tumor Foundation conference on neurofibromatosis type 1, neurofibromatosis type 2, and schwannomatosis

Fisher, M. J. , Belzberg, A. J. , de Blank, P. , De Raedt, T. , Elefteriou, F. , Ferner, R. E. , Giovannini, M. , Harris, G. J. , Kalamarides, M. , Karajannis, M. A. , Kim, A. R. , Lázaro, C. , Le, L. Q. , Li, W. , Listernick, R. , Martin, S. , Morrison, H. , Pasmant, E. , Ratner, N. , Schorry, E. & 7 others Ullrich, N. J., Viskochil, D., Weiss, B., Widemann, B. C., Zhu, Y., Bakker, A. & Serra, E., May 1 2018, In : American Journal of Medical Genetics, Part A. 176, 5, p. 1258-1269 12 p.

Research output: Contribution to journalArticle

Neurofibromatosis 2
Neurofibromatosis 1
Neurofibromatoses
Neurilemmoma
Plexiform Neurofibroma
11 Citations

2017 ACC Expert Consensus Decision Pathway for Optimization of Heart Failure Treatment: Answers to 10 Pivotal Issues About Heart Failure With Reduced Ejection Fraction: A Report of the American College of Cardiology Task Force on Expert Consensus Decision Pathways

Yancy, C. W., Januzzi, J. L., Allen, L. A., Butler, J., Davis, L. L., Fonarow, G. C., Ibrahim, N. E., Jessup, M., Lindenfeld, J. A., Maddox, T. M., Masoudi, F. A., Motiwala, S. R., Patterson, J. H., Walsh, M. N. & Wasserman, A., Jan 16 2018, In : Journal of the American College of Cardiology. 71, 2, p. 201-230 30 p.

Research output: Contribution to journalArticle

ivabradine
Advisory Committees
Heart Failure
Heart Valve Diseases
Echocardiography
Guidelines

21-gene recurrence score assay predicts benefit of post-mastectomy radiotherapy in T1-2 N1 breast cancer

Goodman, C. R., Seagle, B. L. L., Kocherginsky, M., Donnelly, E. D., Shahabi, S. & Strauss, J. B., Aug 15 2018, In : Clinical Cancer Research. 24, 16, p. 3878-3887 10 p.

Research output: Contribution to journalArticle

Mastectomy
Radiotherapy
Breast Neoplasms
Recurrence
Genes
1 Citations

2D discontinuous piecewise linear map: Emergence of fashion cycles

Gardini, L., Sushko, I. & Matsuyama, K., May 1 2018, In : Chaos. 28, 5, 055917

Research output: Contribution to journalArticle

Piecewise Linear Map
Cycle
cycles
Discrete-time
Periodicity

2nd Crossmmla: Multimodal learning analytics across physical and digital spaces

Martinez-Maldonado, R., Echeverria, V., Prieto, L. P., Rodriguez-Triana, M. J., Spikol, D., Curukova, M., Mavrikis, M., Ochoa, X. & Worsley, M., Jan 1 2018, In : CEUR Workshop Proceedings. 2163

Research output: Contribution to journalConference article

Innovation
Students

3D-MICE: Integration of cross-sectional and longitudinal imputation for multi-analyte longitudinal clinical data

Luo, Y., Szolovits, P., Dighe, A. S. & Baron, J. M., Jun 1 2018, In : Journal of the American Medical Informatics Association. 25, 6, p. 645-653 9 p.

Research output: Contribution to journalArticle

Clinical Decision Support Systems
Medical Informatics
Data Mining
American Medical Association
Datasets
4 Citations

3D-printed gelatin scaffolds of differing pore geometry modulate hepatocyte function and gene expression

Lewis, P. L., Green, R. M. & Shah, R. N., Mar 15 2018, In : Acta Biomaterialia. 69, p. 63-70 8 p.

Research output: Contribution to journalArticle

Gelatin
Tissue Engineering
Tissue engineering
Gene expression
Scaffolds
1 Citations

3D printed hyperelastic “bone” scaffolds and regional gene therapy: A novel approach to bone healing

Alluri, R., Jakus, A., Bougioukli, S., Pannell, W., Sugiyama, O., Tang, A., Shah, R. & Lieberman, J. R., Apr 1 2018, In : Journal of Biomedical Materials Research - Part A. 106, 4, p. 1104-1110 7 p.

Research output: Contribution to journalArticle

Gene therapy
Histology
Radiography
Stem cells
Tissue engineering

3D Printing Applications in Minimally Invasive Spine Surgery

Hsu, M. R., Haleem, M. S. & Hsu, W., Jan 1 2018, In : Minimally Invasive Surgery. 2018, 4760769

Research output: Contribution to journalReview article

Minimally Invasive Surgical Procedures
Spine
Technology
Three Dimensional Printing
Patient Care

3D-printing porosity: A new approach to creating elevated porosity materials and structures

Jakus, A. E., Geisendorfer, N. R., Lewis, P. L. & Shah, R. N., May 1 2018, In : Acta Biomaterialia. 72, p. 94-109 16 p.

Research output: Contribution to journalArticle

Porosity
Printing
Salts
Sulfur hexafluoride circuit breakers
Reheat cycle

50 GHz electro-optic modulators with BaTiO3 epitaxial thin film platform for short distance optical communications

Liu, Z., Girouard, P., Chen, P., Jeong, Y. K., Ho, S. T. & Wessels, B. W., Jan 3 2018, 2017 5th Berkeley Symposium on Energy Efficient Electronic Systems, E3S 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-January, p. 1-3 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tamper resistant packaging
Light modulators
Optical communication
Electrooptical effects
Modulators
Hemangioma
Prednisone
Phencyclidine
Episodic Memory
gamma-Aminobutyric Acid
Acetylcholine
Glutamic Acid
2 Citations

7T MR of intracranial pathology: Preliminary observations and comparisons to 3T and 1.5T

Obusez, E. C., Lowe, M., Oh, S. H., Wang, I., Jennifer Bullen, B., Ruggieri, P., Hill, V., Lockwood, D., Emch, T., Moon, D., Loy, G., Lee, J., Kiczek, M., Manoj Massand, M., Statsevych, V., Stultz, T. & Jones, S. E., Mar 1 2018, In : NeuroImage. 168, p. 459-476 18 p.

Research output: Contribution to journalArticle

2 Citations

90Y radioembolization for locally advanced hepatocellular carcinoma with portal vein thrombosis: Long-term outcomes in a 185-patient cohort

Abouchaleh, N., Gabr, A., Ali, R., Asadi, A. A., Mora, R. A., Kallini, J. R., Mouli, S., Riaz, A., Lewandowski, R. J. & Salem, R., Jul 1 2018, In : Journal of Nuclear Medicine. 59, 7, p. 1042-1048 7 p.

Research output: Contribution to journalArticle

Portal Vein
Hepatocellular Carcinoma
Thrombosis
Survival
Bilirubin

99TcO4 remediation by a cationic polymeric network

Li, J., Dai, X., Zhu, L., Xu, C., Zhang, D., Silver, M. A., Li, P., Chen, L., Li, Y., Zuo, D., Zhang, H., Xiao, C., Chen, J., Diwu, J., Farha, O. K., Albrecht-Schmitt, T. E., Chai, Z. & Wang, S., Dec 1 2018, In : Nature communications. 9, 1, 3007

Research output: Contribution to journalArticle

Gyroscopes
sorption
Anions
X-Ray Absorption Spectroscopy
Radiation

A 25-Year-Old Male with a Subgaleal Mass

Hakar, M. H., Liu, B. P. & Horbinski, C. M., May 1 2018, In : Brain Pathology. 28, 3, p. 435-436 2 p.

Research output: Contribution to journalComment/debate

96 Citations

AASLD guidelines for the treatment of hepatocellular carcinoma

Heimbach, J. K., Kulik, L. M., Finn, R. S., Sirlin, C. B., Abecassis, M. M., Roberts, L. R., Zhu, A. X., Murad, M. H. & Marrero, J. A., Jan 1 2018, In : Hepatology. 67, 1, p. 358-380 23 p.

Research output: Contribution to journalArticle

Liver Neoplasms
Hepatocellular Carcinoma
Guidelines

Abdominal obesity, sarcopenia, and osteoporosis are associated with frailty in men living with and without HIV

Hawkins, K. L., Zhang, L., Ng, D. K., Althoff, K. N., Palella, F. J., Kingsley, L. A., Jacobson, L. P., Margolick, J. B., Lake, J. E., Brown, T. T. & Erlandson, K. M., Jun 19 2018, In : AIDS. 32, 10, p. 1257-1266 10 p.

Research output: Contribution to journalArticle

Sarcopenia
Abdominal Obesity
Osteoporosis
HIV
Body Composition

A beginner’s guide to analysis of RNA sequencing data

Koch, C. M., Chiu, S. F., Akbarpour, M., Bharat, A., Ridge, K. M., Bartom, E. T. & Winter, D. R., Aug 1 2018, In : American journal of respiratory cell and molecular biology. 59, 2, p. 145-157 13 p.

Research output: Contribution to journalReview article

RNA Sequence Analysis
RNA
Publications
Research Personnel
Bioinformatics

Aberrant Lck signal via CD28 Costimulation augments antigen-specific functionality and tumor control by redirected T cells with PD-1 blockade in humanized mice

Gulati, P. , Ruhl, J. , Kannan, A. , Pircher, M. , Schuberth, P. , Nytko, K. J. , Pruschy, M. , Sulser, S. , Haefner, M. , Jensen, S. , Soltermann, A. , Jungraithmayr, W. , Eisenring, M. , Winder, T. , Samaras, P. , Tabor, A. , Stenger, R. , Stupp, R. , Weder, W. , Renner, C. & 2 others Munz, C. & Petrausch, U., Aug 15 2018, In : Clinical Cancer Research. 24, 16, p. 3981-3993 13 p.

Research output: Contribution to journalArticle

Antigen Receptors
CD28 Antigens
T-Lymphocytes
Antigens
Neoplasms

Aberrant STAT phosphorylation signaling in peripheral blood mononuclear cells from multiple sclerosis patients

MS-EPIC Study Group, Mar 7 2018, In : Journal of Neuroinflammation. 15, 1, 72

Research output: Contribution to journalArticle

Multiple Sclerosis
Blood Cells
Phosphorylation
Chronic Progressive Multiple Sclerosis
Proteins

A Biologically Inspired Approach to Frequency Domain Feature Extraction for EEG Classification

Gursel Ozmen, N., Gumusel, L. & Yang, Y. Jan 1 2018 In : Computational and Mathematical Methods in Medicine. 2018, 9890132

Research output: Contribution to journalArticle

Imagination
Electroencephalography
Feature Extraction
Frequency Domain
Feature extraction
1 Citations

A bioluminescent and fluorescent orthotopic syngeneic murine model of androgen-dependent and castration-resistant prostate cancer

Anker, J. F., Mok, H., Naseem, A. F., Thumbikat, P. & Abdulkadir, S. A., Mar 6 2018, In : Journal of Visualized Experiments. 2018, 133, e57301

Research output: Contribution to journalArticle

Castration
Gas emissions
Androgens
Tumors
Prostatic Neoplasms
1 Citations

A blood capillary plexus-derived population of progenitor cells contributes to genesis of the dermal lymphatic vasculature during embryonic development

Pichol-Thievend, C., Betterman, K. L., Liu, X., Ma, W., Skoczylas, R., Lesieur, E., Bos, F. L., Schulte, D., Schulte-Merker, S., Hogan, B. M., Oliver, G., Harvey, N. L. & Francois, M., May 1 2018, In : Development (Cambridge). 145, 10, dev160184

Research output: Contribution to journalArticle

Embryonic Development
Stem Cells
Endothelial Cells
Skin
Population

Abnormal esophageal acid exposure on high-dose proton pump inhibitor therapy is common in systemic sclerosis patients

Stern, E. K., Carlson, D. A., Falmagne, S., Hoffmann, A. D., Carns, M., Pandolfino, J. E., Hinchcliff, M. & Brenner, D. M., Feb 1 2018, In : Neurogastroenterology and Motility. 30, 2, e13247

Research output: Contribution to journalArticle

Systemic Scleroderma
Proton Pump Inhibitors
Acids
Electric Impedance
Therapeutics
2 Citations

Abnormal scar identification with sphericalnucleic-acid technology

Yeo, D. C., Wiraja, C., Paller, A. S., Mirkin, C. A. & Xu, C., Apr 1 2018, In : Nature Biomedical Engineering. 2, 4, p. 227-238 12 p.

Research output: Contribution to journalArticle

Connective Tissue Growth Factor
Accessories
Cicatrix
Fibroblasts
Technology

A boundary layer approach to creeping waves

Matkowsky, B. J. Dec 1 2018 In : Applied Mathematics Letters. 86, p. 320-325 6 p.

Research output: Contribution to journalArticle

Boundary Layer
Boundary layers
Eigenvalues and eigenfunctions
Eigenfunctions
Wavelength

Absence of Nanostructuring in NaPbmSbTem+2: Solid Solutions with High Thermoelectric Performance in the Intermediate Temperature Regime

Slade, T. J., Grovogui, J. A., Hao, S., Bailey, T. P., Ma, R., Hua, X., Guéguen, A., Uher, C., Wolverton, C., Dravid, V. P. & Kanatzidis, M. G., Jun 6 2018, In : Journal of the American Chemical Society. 140, 22, p. 7021-7031 11 p.

Research output: Contribution to journalArticle

Disease control
Spark plasma sintering
Solid solutions
Ingots
Temperature

Absolute neutrophil count as a diagnostic guide for the use of MRI in the workup of suspected appendicitis in children

Corkum, K. S., Oyetunji, T. A., Grabowski, J. E., Rigsby, C. K. & Lautz, T. B., Jan 1 2018, (Accepted/In press) In : Journal of Pediatric Surgery.

Research output: Contribution to journalArticle

Appendicitis
Neutrophils
Magnetic Resonance Imaging
Sensitivity and Specificity

Absorbed dose kernel and self-shielding calculations for a novel radiopaque glass microsphere for transarterial radioembolization

Church, C., Mawko, G., Archambault, J. P., Lewandowski, R., Liu, D., Kehoe, S., Boyd, D., Abraham, R. & Syme, A., Feb 1 2018, In : Medical Physics. 45, 2, p. 934-942 9 p.

Research output: Contribution to journalArticle

Microspheres
Glass
Radioisotopes
Neutrons
Radiometry

Academic advising and student affairs working together to improve first-year experience of engineering students

Bacon, K. K., Birdwell, J. A., Brown, O., Tevaarwerk, E., Freeman, R. W., Roldan, W., Gentry, K. & Pokryfky, A. R., Jun 23 2018, In : ASEE Annual Conference and Exposition, Conference Proceedings. 2018-June

Research output: Contribution to journalConference article

Students

Academic information on Twitter: A user survey

Mohammadi, E., Thelwall, M., Kwasny, M. & Holmes, K. L., May 1 2018, In : PLoS One. 13, 5, e0197265

Research output: Contribution to journalReview article

Social Sciences
Licensure
Occupations
Reproduction
Publications
2 Citations

A Carcinogen-induced mouse model recapitulates the molecular alterations of human muscle invasive bladder cancer

Fantini, D. , Glaser, A. P. , Rimar, K. J. , Wang, Y. , Schipma, M. , Varghese, N. , Rademaker, A. , Behdad, A. , Yellapa, A. , Yu, Y. , Sze, C. C. L. , Wang, L. , Zhao, Z. , Crawford, S. E. , Hu, D. , Licht, J. D. , Collings, C. K. , Bartom, E. , Theodorescu, D. , Shilatifard, A. & 1 others Meeks, J. J., Jan 25 2018, (Accepted/In press) In : Oncogene. p. 1-15 15 p.

Research output: Contribution to journalArticle

Molecular Models
Urinary Bladder Neoplasms
Carcinogens
Muscles
Neoplasms

A case of atypical hemolytic uremic syndrome in a second renal transplant

Zwang, N. A., Ho, B., Kanwar, Y. S., Lewis, B., Cusick, M., Friedewald, J. J. & Gallon, L., Feb 1 2018, In : Journal of Nephrology. 31, 1, p. 165-172 8 p.

Research output: Contribution to journalArticle

Allografts
Transplants
Kidney
Acute Kidney Injury
Renal Insufficiency