Find Research Outputs

2018

3D X-ray imaging of continuous objects beyond the depth of focus limit

Gilles, M. A., Nashed, Y. S. G., Du, M., Jacobsen, C. & Wild, S. M., Sep 20 2018, In : Optica. 5, 9, p. 1078-1086 9 p.

Research output: Contribution to journalArticle

Imaging techniques
X rays
Imaging systems
x rays
Diffraction

4D flow MRI

Schmitter, S. & Schnell, S., Feb 21 2018, Quantification of Biophysical Parameters in Medical Imaging. Springer International Publishing, p. 187-212 26 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Magnetic resonance imaging
Hemodynamics
Wall flow
Shear stress
Blood

4-D flow MRI aortic 3-D hemodynamics and wall shear stress remain stable over short-term follow-up in pediatric and young adult patients with bicuspid aortic valve

Rose, M. J., Rigsby, C. K., Berhane, H., Bollache, E., Jarvis, K., Barker, A. J., Schnell, S., Allen, B. D., Robinson, J. D. & Markl, M., Jan 1 2018, (Accepted/In press) In : Pediatric radiology.

Research output: Contribution to journalArticle

Young Adult
Hemodynamics
Pediatrics
Growth
Aortic Rupture

50×50×50

Labarthe, D. R. & Lloyd-Jones, D. M., Sep 4 2018, In : Circulation. 138, 10, p. 968-970 3 p.

Research output: Contribution to journalArticle

Cerebrovascular Disorders
Coronary Disease
Cardiovascular Diseases
Public Health
Mortality

50 GHz electro-optic modulators with BaTiO3 epitaxial thin film platform for short distance optical communications

Liu, Z., Girouard, P., Chen, P., Jeong, Y. K., Ho, S-T. & Wessels, B. W., Jan 3 2018, 2017 5th Berkeley Symposium on Energy Efficient Electronic Systems, E3S 2017 - Proceedings. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-January. p. 1-3 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Light modulators
Epitaxial films
Optical communication
Electrooptical effects
Modulators

50 Years Ago in THE JOURNAL OF PEDIATRICS: Central Nervous System Damage and Hypoglycemia

Chang, J., Jun 1 2018, In : Journal of Pediatrics. 197, 1 p.

Research output: Contribution to journalArticle

Hypoglycemia
Central Nervous System
Hemangioma
Prednisone
Newborn Respiratory Distress Syndrome
Nervous System
Phencyclidine
Episodic Memory
gamma-Aminobutyric Acid
Acetylcholine
Glutamic Acid

6mer seed toxicity in tumor suppressive microRNAs

Gao, Q. Q., Putzbach, W. E., Murmann, A. E., Chen, S., Sarshad, A. A., Peter, J. M., Bartom, E. T., Hafner, M. & Peter, M. E., Dec 1 2018, In : Nature communications. 9, 1, 4504.

Research output: Contribution to journalArticle

MicroRNAs
toxicity
Toxicity
Seed
Tumors
3 Citations

7T MR of intracranial pathology: Preliminary observations and comparisons to 3T and 1.5T

Obusez, E. C., Lowe, M., Oh, S. H., Wang, I., Jennifer Bullen, B., Ruggieri, P., Hill, V., Lockwood, D., Emch, T., Moon, D., Loy, G., Lee, J., Kiczek, M., Manoj Massand, M., Statsevych, V., Stultz, T. & Jones, S. E., Mar 1 2018, In : Neuroimage. 168, p. 459-476 18 p.

Research output: Contribution to journalArticle

Pathology
Signal-To-Noise Ratio
Noise
Brain Concussion
Cerebral Amyloid Angiopathy
4 Citations

90Y radioembolization for locally advanced hepatocellular carcinoma with portal vein thrombosis: Long-term outcomes in a 185-patient cohort

Abouchaleh, N., Gabr, A., Ali, R., Asadi, A. A., Mora, R. A., Kallini, J. R., Mouli, S. K., Riaz, A., Lewandowski, R. J. & Salem, R., Jul 1 2018, In : Journal of Nuclear Medicine. 59, 7, p. 1042-1048 7 p.

Research output: Contribution to journalArticle

Portal Vein
Hepatocellular Carcinoma
Thrombosis
Survival
Bilirubin
6 Citations

99TcO4 remediation by a cationic polymeric network

Li, J., Dai, X., Zhu, L., Xu, C., Zhang, D., Silver, M. A., Li, P., Chen, L., Li, Y., Zuo, D., Zhang, H., Xiao, C., Chen, J., Diwu, J., Farha, O. K., Albrecht-Schmitt, T. E., Chai, Z. & Wang, S., Dec 1 2018, In : Nature communications. 9, 1, 3007.

Research output: Contribution to journalArticle

Remediation
sorption
Anions
Sorption
X-Ray Absorption Spectroscopy
1 Citations

9-ING-41, a small-molecule glycogen synthase kinase-3 inhibitor, is active in neuroblastoma

Ugolkov, A. V., Bondarenko, G. I., Dubrovskyi, O., Berbegall, A. P., Navarro, S., Noguera, R., O'Halloran, T. V., Hendrix, M. J., Giles, F. J. & Mazar, A. P., Sep 1 2018, In : Anti-Cancer Drugs. 29, 8, p. 717-724 8 p.

Research output: Contribution to journalArticle

Glycogen Synthase Kinase 3
Neuroblastoma
irinotecan
Glycogen Synthase Kinases
Heterografts

A 25-Year-Old Male with a Subgaleal Mass

Hakar, M. H., Liu, B. P. & Horbinski, C. M., May 1 2018, In : Brain Pathology. 28, 3, p. 435-436 2 p.

Research output: Contribution to journalComment/debate

150 Citations

AASLD guidelines for the treatment of hepatocellular carcinoma

Heimbach, J. K., Kulik, L. M., Finn, R. S., Sirlin, C. B., Abecassis, M. M., Roberts, L. R., Zhu, A. X., Murad, M. H. & Marrero, J. A., Jan 1 2018, In : Hepatology. 67, 1, p. 358-380 23 p.

Research output: Contribution to journalArticle

Liver Neoplasms
Hepatocellular Carcinoma
Guidelines

Abdominal obesity, sarcopenia, and osteoporosis are associated with frailty in men living with and without HIV

Hawkins, K. L., Zhang, L., Ng, D. K., Althoff, K. N., Palella Jr, F. J., Kingsley, L. A., Jacobson, L. P., Margolick, J. B., Lake, J. E., Brown, T. T. & Erlandson, K. M., Jun 19 2018, In : AIDS. 32, 10, p. 1257-1266 10 p.

Research output: Contribution to journalArticle

Sarcopenia
Abdominal Obesity
Osteoporosis
HIV
Body Composition

Abdominal pain and vomiting in a pancreas transplant recipient

Craig-Schapiro, R., Atiemo, K. & Leventhal, J. R., Sep 1 2018, In : American Journal of Transplantation. 18, 9, p. 2362-2364 3 p.

Research output: Contribution to journalEditorial

Abdominal Pain
Vomiting
Pancreas
Transplant Recipients

A beginner’s guide to analysis of RNA sequencing data

Koch, C. M., Chiu, S. F., Akbarpour, M., Bharat, A., Ridge, K. M., Bartom, E. T. & Winter, D. R., Aug 1 2018, In : American journal of respiratory cell and molecular biology. 59, 2, p. 145-157 13 p.

Research output: Contribution to journalReview article

RNA Sequence Analysis
RNA
Publications
Research Personnel
Bioinformatics

Aberrant activation of non-coding RNA targets of transcriptional elongation complexes contributes to TDP-43 toxicity

Chung, C. Y., Berson, A., Kennerdell, J. R., Sartoris, A., Unger, T., Porta, S., Kim, H. J., Smith, E., Shilatifard, A., Van Deerlin, V., Lee, V. M. Y., Chen-Plotkin, A. & Bonini, N. M., Dec 1 2018, In : Nature communications. 9, 1, 4406.

Research output: Contribution to journalArticle

Untranslated RNA
toxicity
Frontotemporal Dementia
elongation
Toxicity

Aberrant Drp1-mediated mitochondrial division presents in humans with variable outcomes

Whitley, B. N., Lam, C., Cui, H., Haude, K., Bai, R., Escobar, L., Hamilton, A., Brady, L., Tarnopolsky, M. A., Dengle, L., Picker, J., Lincoln, S., Lackner, L. L., Glass, I. A. & Hoppins, S., Nov 1 2018, In : Human molecular genetics. 27, 21, p. 3710-3719 10 p.

Research output: Contribution to journalArticle

Dynamins
Mitochondrial Dynamics
Proteins
Organelles
Mutation

Aberrant expression of glycogen synthase kinase-3β in human breast and head and neck cancer

Ugolkov, A. V., Matsangou, M., Taxter, T. J., O'Halloran, T. V., Cryns, V. L., Giles, F. J. & Mazar, A. P., Nov 1 2018, In : Oncology Letters. 16, 5, p. 6437-6444 8 p.

Research output: Contribution to journalArticle

Glycogen Synthase Kinases
Head and Neck Neoplasms
Breast Neoplasms
Breast
Protein-Serine-Threonine Kinases

Aberrant Lck signal via CD28 Costimulation augments antigen-specific functionality and tumor control by redirected T cells with PD-1 blockade in humanized mice

Gulati, P., Ruhl, J., Kannan, A., Pircher, M., Schuberth, P., Nytko, K. J., Pruschy, M., Sulser, S., Haefner, M., Jensen, S., Soltermann, A., Jungraithmayr, W., Eisenring, M., Winder, T., Samaras, P., Tabor, A., Stenger, R., Stupp, R., Weder, W., Renner, C. & 2 othersMunz, C. & Petrausch, U., Aug 15 2018, In : Clinical Cancer Research. 24, 16, p. 3981-3993 13 p.

Research output: Contribution to journalArticle

Antigen Receptors
CD28 Antigens
T-Lymphocytes
Antigens
Neoplasms

Aberrant STAT phosphorylation signaling in peripheral blood mononuclear cells from multiple sclerosis patients

MS-EPIC Study Group, Mar 7 2018, In : Journal of Neuroinflammation. 15, 1, 72.

Research output: Contribution to journalArticle

Multiple Sclerosis
Blood Cells
Phosphorylation
Chronic Progressive Multiple Sclerosis
Proteins
Aptitude
stroke
Forearm
Arm
Stroke
1 Citations

Ab Initio Predictions of Double-Layer TiO2-Terminated SrTiO3(001) Surface Reconstructions

Cook, S. & Marks, L., Jan 1 2018, (Accepted/In press) In : Journal of Physical Chemistry C.

Research output: Contribution to journalArticle

Surface reconstruction
Surface structure
predictions
Oxides
Ising model
1 Citations

A Biologically Inspired Approach to Frequency Domain Feature Extraction for EEG Classification

Gursel Ozmen, N., Gumusel, L. & Yang, Y., Jan 1 2018, In : Computational and Mathematical Methods in Medicine. 2018, 9890132.

Research output: Contribution to journalArticle

Imagination
Electroencephalography
Feature Extraction
Frequency Domain
Feature extraction
1 Citations

A bioluminescent and fluorescent orthotopic syngeneic murine model of androgen-dependent and castration-resistant prostate cancer

Anker, J. F., Mok, H., Naseem, A. F., Thumbikat, P. & Abdulkadir, S. A., Mar 6 2018, In : Journal of Visualized Experiments. 2018, 133, e57301.

Research output: Contribution to journalArticle

Urology
Surgery
Androgens
Medicine
Tumors
1 Citations

A biopsychosocial approach to examine Mexican American adolescents' academic achievement and substance use

Qu, Y., Galván, A., Fuligni, A. J. & Telzer, E. H., Apr 1 2018, In : RSF. 4, 4, p. 84-97 14 p.

Research output: Contribution to journalArticle

academic achievement
adolescent
brain
biological factors
psychosocial factors
1 Citations

A blood capillary plexus-derived population of progenitor cells contributes to genesis of the dermal lymphatic vasculature during embryonic development

Pichol-Thievend, C., Betterman, K. L., Liu, X., Ma, W., Skoczylas, R., Lesieur, E., Bos, F. L., Schulte, D., Schulte-Merker, S., Hogan, B. M., Oliver, G., Harvey, N. L. & Francois, M., May 1 2018, In : Development (Cambridge). 145, 10, dev160184.

Research output: Contribution to journalArticle

Embryonic Development
Stem Cells
Endothelial Cells
Skin
Population
1 Citations

Abnormal esophageal acid exposure on high-dose proton pump inhibitor therapy is common in systemic sclerosis patients

Stern, E. K., Carlson, D. A., Falmagne, S., Hoffmann, A. D., Carns, M., Pandolfino, J. E., Hinchcliff, M. & Brenner, D. M., Feb 1 2018, In : Neurogastroenterology and Motility. 30, 2, e13247.

Research output: Contribution to journalArticle

Systemic Scleroderma
Proton Pump Inhibitors
Acids
Electric Impedance
Therapeutics
7 Citations

Abnormal scar identification with sphericalnucleic-acid technology

Yeo, D. C., Wiraja, C., Paller, A., Mirkin, C. A. & Xu, C., Apr 1 2018, In : Nature Biomedical Engineering. 2, 4, p. 227-238 12 p.

Research output: Contribution to journalArticle

Connective Tissue Growth Factor
Fibroblasts
Cicatrix
Skin
Technology

A bootstrap method for constructing pointwise and uniform confidence bands for conditional quantile funtions

Horowitz, J. L. & Krishnamurthy, A., Oct 1 2018, In : Statistica Sinica. 28, 4, p. 2609-2632 24 p.

Research output: Contribution to journalArticle

Conditional Quantiles
Confidence Bands
Bootstrap Method
Quantile Function
Bandwidth

A boundary layer approach to creeping waves

Matkowsky, B. J., Dec 1 2018, In : Applied Mathematics Letters. 86, p. 320-325 6 p.

Research output: Contribution to journalArticle

Boundary Layer
Boundary layers
Eigenvalues and eigenfunctions
Eigenfunctions
Wavelength

About Convention and Grammar

Glanzberg, M., 2018, Beyond Semantics and Pragmatics. Preyer, G. (ed.). Oxford University Press

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Citations

Above and beyond Watson and Crick: Guanine Quadruplex Structures and Microbes

Seifert, H., Sep 8 2018, In : Annual Review of Microbiology. 72, p. 49-69 21 p.

Research output: Contribution to journalReview article

G-Quadruplexes
Molecular Medicine
Nucleic Acid Conformation
Viral Structures
Eukaryota

Abrupt Thermal Shock of (NH4)2Mo3S13 Leads to Ultrafast Synthesis of Porous Ensembles of MoS2 Nanocrystals for High Gain Photodetectors

Islam, S. M., Sangwan, V. K., Li, Y., Kang, J., Zhang, X., He, Y., Zhao, J., Murthy, A., Ma, S., Dravid, V. P., Hersam, M. & Kanatzidis, M., Nov 7 2018, In : ACS Applied Materials and Interfaces. 10, 44, p. 38193-38200 8 p.

Research output: Contribution to journalArticle

Thermal shock
Photodetectors
Nanocrystals
Composite films
Nanoparticles
2 Citations

Absence of Nanostructuring in NaPbmSbTem+2: Solid Solutions with High Thermoelectric Performance in the Intermediate Temperature Regime

Slade, T. J., Grovogui, J. A., Hao, S., Bailey, T. P., Ma, R., Hua, X., Guéguen, A., Uher, C., Wolverton, C. M., Dravid, V. P. & Kanatzidis, M., Jun 6 2018, In : Journal of the American Chemical Society. 140, 22, p. 7021-7031 11 p.

Research output: Contribution to journalArticle

Spark plasma sintering
Solid solutions
Ingots
Temperature
Hot Temperature

Absolute neutrophil count as a diagnostic guide for the use of MRI in the workup of suspected appendicitis in children

Corkum, K. S., Oyetunji, T. A., Grabowski, J. E., Rigsby, C. K. & Lautz, T. B., Jan 1 2018, (Accepted/In press) In : Journal of Pediatric Surgery.

Research output: Contribution to journalArticle

Appendicitis
Neutrophils
Magnetic Resonance Imaging
Sensitivity and Specificity

Absorbed dose kernel and self-shielding calculations for a novel radiopaque glass microsphere for transarterial radioembolization

Church, C., Mawko, G., Archambault, J. P., Lewandowski, R. J., Liu, D., Kehoe, S., Boyd, D., Abraham, R. & Syme, A., Feb 1 2018, In : Medical Physics. 45, 2, p. 934-942 9 p.

Research output: Contribution to journalArticle

Microspheres
Glass
Radioisotopes
Neutrons
Radiometry
1 Citations

A C6orf10/LOC101929163 locus is associated with age of onset in C9orf72 carriers

Zhang, M., Ferrari, R., Tartaglia, M. C., Keith, J., Surace, E. I., Wolf, U., Sato, C., Grinberg, M., Liang, Y., Xi, Z., Dupont, K., McGoldrick, P., Weichert, A., McKeever, P. M., Schneider, R., McCorkindale, M. D., Manzoni, C., Rademakers, R., Graff-Radford, N. R., Dickson, D. W. & 60 othersParisi, J. E., Boeve, B. F., Petersen, R. C., Miller, B. L., Seeley, W. W., Van Swieten, J. C., Van Rooij, J., Pijnenburg, Y., Van Der Zee, J., Van Broeckhoven, C., Le Ber, I., Van Deerlin, V., Suh, E. R., Rohrer, J. D., Mead, S., Graff, C., Öijerstedt, L., Pickering-Brown, S., Rollinson, S., Rossi, G., Tagliavini, F., Brooks, W. S., Dobson-Stone, C., Halliday, G. M., Hodges, J. R., Piguet, O., Binetti, G., Benussi, L., Ghidoni, R., Nacmias, B., Sorbi, S., Bruni, A. C., Galimberti, D., Scarpini, E., Rainero, I., Rubino, E., Clarimon, J., Lleó, A., Ruiz, A., Hernández, I., Pastor, P., Diez-Fairen, M., Borroni, B., Pasquier, F., Deramecourt, V., Lebouvier, T., Perneczky, R., Diehl-Schmid, J., Grafman, J. H., Huey, E. D., Mayeux, R., Nalls, M. A., Hernandez, D., Singleton, A., Momeni, P., Zeng, Z., Hardy, J., Robertson, J., Zinman, L. & Rogaeva, E., Oct 1 2018, In : Brain. 141, 10, p. 2895-2907 13 p.

Research output: Contribution to journalArticle

Age of Onset
DNA Methylation
HLA-DRB1 Chains
Alleles
Single Nucleotide Polymorphism

Academic advising and student affairs working together to improve first-year experience of engineering students

Bacon, K. K., Birdwell, J. A., Brown, O., DeCosta, E., Freeman, R. W., Roldan, W., Gentry, K. L. & Pokryfky, A. R., Jun 23 2018, In : ASEE Annual Conference and Exposition, Conference Proceedings. 2018-June

Research output: Contribution to journalConference article

Students
1 Citations

Academic information on Twitter: A user survey

Mohammadi, E., Thelwall, M., Kwasny, M. J. & Holmes, K., May 1 2018, In : PloS one. 13, 5, e0197265.

Research output: Contribution to journalReview article

Social sciences
Social Sciences
Occupations
Publications
Motivation

A call to action—The transplant recipient's expectation of precision in transplant medicine

Wiebe, C., Roitberg-Tambur, A. & Nickerson, P. W., Jan 1 2018, (Accepted/In press) In : American Journal of Transplantation.

Research output: Contribution to journalArticle

Medicine
Transplants
Transplant Recipients
5 Citations

A Carcinogen-induced mouse model recapitulates the molecular alterations of human muscle invasive bladder cancer

Fantini, D., Glaser, A. P., Rimar, K. J., Wang, Y., Schipma, M. J., Varghese, N., Rademaker, A. W., Behdad, A., Yellapa, A., Yu, Y., Sze, C. C. L., Wang, L., Zhao, Z., Crawford, S. E., Hu, D., Licht, J. D., Collings, C. K., Bartom, E. T., Theodorescu, D., Shilatifard, A. & 1 othersMeeks, J. J., Apr 1 2018, In : Oncogene. 37, 14, p. 1911-1925 15 p.

Research output: Contribution to journalArticle

Molecular Models
Urinary Bladder Neoplasms
Carcinogens
Muscles
Neoplasms
1 Citations

A case of atypical hemolytic uremic syndrome in a second renal transplant

Zwang, N. A., Ho, B., Kanwar, Y. S., Lewis, B., Cusick, M., Friedewald, J. J. & Gallon, L., Feb 1 2018, In : Journal of Nephrology. 31, 1, p. 165-172 8 p.

Research output: Contribution to journalArticle

Allografts
Transplants
Kidney
Acute Kidney Injury
Renal Insufficiency

A Case of Metastatic Biliary Tract Cancer Diagnosed Through Identification of an IDH1 Mutation

Kamath, S. D., Lin, X. & Kalyan, A., Jan 1 2018, (Accepted/In press) In : Oncologist.

Research output: Contribution to journalArticle

Biliary Tract Neoplasms
Mutation
Adenocarcinoma
Neoplasms
Paraffin

A Case of Reverse Pelvic Congestion Syndrome?

Bondarev, S., Gupta, S. A. & Resnick, S. A., Nov 1 2018, In : Journal of Vascular and Interventional Radiology. 29, 11, 1 p.

Research output: Contribution to journalArticle

A case study evaluating the portability of an executable computable phenotype algorithm across multiple institutions and electronic health record environments

Pacheco, J. A., Rasmussen, L. V., Kiefer, R. C., Campion, T. R., Speltz, P., Carroll, R. J., Stallings, S. C., Mo, H., Ahuja, M., Jiang, G., LaRose, E. R., Peissig, P. L., Shang, N., Benoit, B., Gainer, V. S., Borthwick, K., Jackson, K. L., Sharma, A., Wu, A. Y., Kho, A. N. & 4 othersRoden, D. M., Pathak, J., Denny, J. C. & Thompson, W. K., Nov 1 2018, In : Journal of the American Medical Informatics Association : JAMIA. 25, 11, p. 1540-1546 7 p.

Research output: Contribution to journalArticle

Electronic Health Records
Phenotype
Genomics
Prostatic Hyperplasia

ACC/AATS/AHA/ASE/EACTS/HVS/SCA/SCAI/SCCT/SCMR/STS 2017 Appropriate use criteria for the treatment of patients with severe aortic stenosis: A report of the American College of Cardiology Appropriate Use Criteria Task Force, American Association for Thoracic Surgery, American Heart Association, American Society of Echocardiography, European Association for Cardio-Thoracic Surgery, Heart Valve Society, Society of Cardiovascular Anesthesiologists, Society for Cardiovascular Angiography and Interventions, Society of Cardiovascular Computed Tomography, Society for Cardiovascular Magnetic Resonance, and Society of Thoracic Surgeons

Bonow, R. O., Brown, A. S., Gillam, L. D., Kapadia, S. R., Kavinsky, C. J., Lindman, B. R., Mack, M. J., Thourani, V. H., Dehmer, G. J., Beaver, T. M., Bradley, S. M., Carabello, B. A., Desai, M. Y., George, I., Green, P., Holmes, D. R., Johnston, D., Leipsic, J., Mick, S. L., Passeri, J. J. & 22 othersPiana, R. N., Reichek, N., Ruiz, C. E., Taub, C. C., Thomas, J. D., Turi, Z. G., Doherty, J. U., Bailey, S. R., Bhave, N. M., Daugherty, S. L., Dean, L. S., Duvernoy, C. S., Hendel, R. C., Kramer, C. M., Lindsay, B. D., Manning, W. J., Mehrotra, P., Patel, M. R., Sachdeva, R., Wann, L. S., Winchester, D. E. & Allen, J. M., Feb 1 2018, In : European Journal of Cardio-thoracic Surgery. 53, 2, p. 306-308 3 p., ezx410.

Research output: Contribution to journalArticle

Heart Valves
Aortic Valve Stenosis
Advisory Committees
Tomography
Aortic Valve