TY - JOUR
T1 - An Engineered Glutamate in Biosynthetic Models of Heme-Copper Oxidases Drives Complete Product Selectivity by Tuning the Hydrogen-Bonding Network
AU - Petrik, Igor D.
AU - Davydov, Roman
AU - Kahle, Maximilian
AU - Sandoval, Braddock
AU - Dwaraknath, Sudharsan
AU - Adelroth, Pia
AU - Hoffman, Brian
AU - Lu, Yi
N1 - Funding Information:
Research reported in this publication was supported by the National Institute of General Medical Sciences of the National Institutes of Health via Grants R01GM062211 (Y.L.) and R01GM111097 (B.H.).
Funding Information:
The authors thank Dr. Julian Reed for lending a helping hand in various experiments, Dr. Stoyan Toshkov for assistance with γ irradiation, Dr. Howard Robinson for assistance with data collection at NSLS, Drs. Vukica Srajer and Robert Henning for beamline support at BioCARS for spectroscopic screening of oxy crystals, Dr. Vivian Stojanoff for beamline support at SSRL, and Drs. Parisa Hosseinzadeh, Shiliang Tian, and Ilya Denisov for helpful discussion. This research used beamline x29 of the National Synchrotron Light Source, a U.S. Department of Energy (DOE) Office of Science User Facility operated for the DOE Office of Science by Brookhaven National Laboratory under Contract DE-AC02-98CH10886. This research used Life Sciences Collaborative Access Team beamline 21-ID-G at the Advanced Photon Source, a DOE Office of Science User Facility operated for the DOE Office of Science by Argonne National Laboratory under Contract DE-AC02–06CH11357. Use of LS-CAT Sector 21 was supported by the Michigan Economic Development Corp. and the Michigan Technology Tri-Corridor (Grant 085P1000817). Use of the Stanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, is supported by the DOE Office of Science, Office of Basic Energy Sciences, under Contract DE-AC02–76SF00515. The SSRL Structural Molecular Biology Program is supported by the DOE Office of Biological and Environmental Research and by the National Institutes of Health, National Institute of General Medical Sciences (Grant P30GM133894).
Publisher Copyright:
© 2021 American Chemical Society.
PY - 2021/2/2
Y1 - 2021/2/2
N2 - Efficiently carrying out the oxygen reduction reaction (ORR) is critical for many applications in biology and chemistry, such as bioenergetics and fuel cells, respectively. In biology, this reaction is carried out by large, transmembrane oxidases such as heme-copper oxidases (HCOs) and cytochrome bd oxidases. Common to these oxidases is the presence of a glutamate residue next to the active site, but its precise role in regulating the oxidase activity remains unclear. To gain insight into its role, we herein report that incorporation of glutamate next to a designed heme-copper center in two biosynthetic models of HCOs improves O2 binding affinity, facilitates protonation of reaction intermediates, and eliminates release of reactive oxygen species. High-resolution crystal structures of the models revealed extended, water-mediated hydrogen-bonding networks involving the glutamate. Electron paramagnetic resonance of the cryoreduced oxy-ferrous centers at cryogenic temperature followed by thermal annealing allowed observation of the key hydroperoxo intermediate that can be attributed to the hydrogen-bonding network. By demonstrating these important roles of glutamate in oxygen reduction biochemistry, this work offers deeper insights into its role in native oxidases, which may guide the design of more efficient artificial ORR enzymes or catalysts for applications such as fuel cells.
AB - Efficiently carrying out the oxygen reduction reaction (ORR) is critical for many applications in biology and chemistry, such as bioenergetics and fuel cells, respectively. In biology, this reaction is carried out by large, transmembrane oxidases such as heme-copper oxidases (HCOs) and cytochrome bd oxidases. Common to these oxidases is the presence of a glutamate residue next to the active site, but its precise role in regulating the oxidase activity remains unclear. To gain insight into its role, we herein report that incorporation of glutamate next to a designed heme-copper center in two biosynthetic models of HCOs improves O2 binding affinity, facilitates protonation of reaction intermediates, and eliminates release of reactive oxygen species. High-resolution crystal structures of the models revealed extended, water-mediated hydrogen-bonding networks involving the glutamate. Electron paramagnetic resonance of the cryoreduced oxy-ferrous centers at cryogenic temperature followed by thermal annealing allowed observation of the key hydroperoxo intermediate that can be attributed to the hydrogen-bonding network. By demonstrating these important roles of glutamate in oxygen reduction biochemistry, this work offers deeper insights into its role in native oxidases, which may guide the design of more efficient artificial ORR enzymes or catalysts for applications such as fuel cells.
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U2 - 10.1021/acs.biochem.0c00852
DO - 10.1021/acs.biochem.0c00852
M3 - Article
C2 - 33464878
AN - SCOPUS:85100262241
SN - 0006-2960
VL - 60
SP - 346
EP - 355
JO - Biochemistry
JF - Biochemistry
IS - 4
ER -