Analysis of crystalline and solution states of ligand-free spermidine N-acetyltransferase (SpeG) from escherichia coli

Ekaterina V. Filippova*, Steven Weigand, Olga Kiryukhina, Alan J. Wolfe, Wayne F Anderson

*Corresponding author for this work

Research output: Contribution to journalArticle

Abstract

Spermidine N-acetyltransferase (SpeG) transfers an acetyl group from acetylcoenzyme A to an N-terminal amino group of intracellular spermidine. This acetylation inactivates spermidine, reducing the polyamine toxicity that tends to occur under certain chemical and physical stresses. The structure of the SpeG protein from Vibrio cholerae has been characterized: while the monomer possesses a structural fold similar to those of other Gcn5-related N-acetyltransferase superfamily members, its dodecameric structure remains exceptional. In this paper, structural analyses of SpeG isolated from Escherichia coli are described. Like V. cholerae SpeG, E. coli SpeG forms dodecamers, as revealed by two crystal structures of the ligand-free E. coli SpeG dodecamer determined at 1.75 and 2.9 Å resolution. Although both V. cholerae SpeG and E. coli SpeG can adopt an asymmetric open dodecameric state, solution analysis showed that the oligomeric composition of ligand-free E. coli SpeG differs from that of ligand-free V. cholerae SpeG. Based on these data, it is proposed that the equilibrium balance of SpeG oligomers in the absence of ligands differs from one species to another and thus might be important for SpeG function.

Original languageEnglish (US)
Pages (from-to)545-553
Number of pages9
JournalActa Crystallographica Section D: Structural Biology
Volume75
DOIs
StatePublished - Jun 1 2019

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Vibrio cholerae
Escherichia coli
Ligands
Spermidine
Acetyltransferases
Polyamines
Acetylation
diamine N-acetyltransferase
Proteins

Keywords

  • Escherichia coli
  • GNAT family
  • Polyamine acetylation
  • SpeG
  • Spermidine N-acetyltransferase

ASJC Scopus subject areas

  • Structural Biology

Cite this

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title = "Analysis of crystalline and solution states of ligand-free spermidine N-acetyltransferase (SpeG) from escherichia coli",
abstract = "Spermidine N-acetyltransferase (SpeG) transfers an acetyl group from acetylcoenzyme A to an N-terminal amino group of intracellular spermidine. This acetylation inactivates spermidine, reducing the polyamine toxicity that tends to occur under certain chemical and physical stresses. The structure of the SpeG protein from Vibrio cholerae has been characterized: while the monomer possesses a structural fold similar to those of other Gcn5-related N-acetyltransferase superfamily members, its dodecameric structure remains exceptional. In this paper, structural analyses of SpeG isolated from Escherichia coli are described. Like V. cholerae SpeG, E. coli SpeG forms dodecamers, as revealed by two crystal structures of the ligand-free E. coli SpeG dodecamer determined at 1.75 and 2.9 {\AA} resolution. Although both V. cholerae SpeG and E. coli SpeG can adopt an asymmetric open dodecameric state, solution analysis showed that the oligomeric composition of ligand-free E. coli SpeG differs from that of ligand-free V. cholerae SpeG. Based on these data, it is proposed that the equilibrium balance of SpeG oligomers in the absence of ligands differs from one species to another and thus might be important for SpeG function.",
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Analysis of crystalline and solution states of ligand-free spermidine N-acetyltransferase (SpeG) from escherichia coli. / Filippova, Ekaterina V.; Weigand, Steven; Kiryukhina, Olga; Wolfe, Alan J.; Anderson, Wayne F.

In: Acta Crystallographica Section D: Structural Biology, Vol. 75, 01.06.2019, p. 545-553.

Research output: Contribution to journalArticle

TY - JOUR

T1 - Analysis of crystalline and solution states of ligand-free spermidine N-acetyltransferase (SpeG) from escherichia coli

AU - Filippova, Ekaterina V.

AU - Weigand, Steven

AU - Kiryukhina, Olga

AU - Wolfe, Alan J.

AU - Anderson, Wayne F

PY - 2019/6/1

Y1 - 2019/6/1

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AB - Spermidine N-acetyltransferase (SpeG) transfers an acetyl group from acetylcoenzyme A to an N-terminal amino group of intracellular spermidine. This acetylation inactivates spermidine, reducing the polyamine toxicity that tends to occur under certain chemical and physical stresses. The structure of the SpeG protein from Vibrio cholerae has been characterized: while the monomer possesses a structural fold similar to those of other Gcn5-related N-acetyltransferase superfamily members, its dodecameric structure remains exceptional. In this paper, structural analyses of SpeG isolated from Escherichia coli are described. Like V. cholerae SpeG, E. coli SpeG forms dodecamers, as revealed by two crystal structures of the ligand-free E. coli SpeG dodecamer determined at 1.75 and 2.9 Å resolution. Although both V. cholerae SpeG and E. coli SpeG can adopt an asymmetric open dodecameric state, solution analysis showed that the oligomeric composition of ligand-free E. coli SpeG differs from that of ligand-free V. cholerae SpeG. Based on these data, it is proposed that the equilibrium balance of SpeG oligomers in the absence of ligands differs from one species to another and thus might be important for SpeG function.

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