TY - GEN
T1 - Brain Tumor Survival Prediction Using Radiomics Features
AU - Yousaf, Sobia
AU - Anwar, Syed Muhammad
AU - RaviPrakash, Harish
AU - Bagci, Ulas
N1 - Publisher Copyright:
© 2020, Springer Nature Switzerland AG.
PY - 2020
Y1 - 2020
N2 - Surgery planning in patients diagnosed with brain tumor is dependent on their survival prognosis. A poor prognosis might demand for a more aggressive treatment and therapy plan, while a favorable prognosis might enable a less risky surgery plan. Thus, accurate survival prognosis is an important step in treatment planning. Recently, deep learning approaches have been used extensively for brain tumor segmentation followed by the use of deep features for prognosis. However, radiomics-based studies have shown more promise using engineered/hand-crafted features. In this paper, we propose a three-step approach for multi-class survival prognosis. In the first stage, we extract image slices corresponding to tumor regions from multiple magnetic resonance image modalities. We then extract radiomic features from these 2D slices. Finally, we train machine learning classifiers to perform the classification. We evaluate our proposed approach on the publicly available BraTS 2019 data and achieve an accuracy of 76.5% and precision of 74.3% using the random forest classifier, which to the best of our knowledge are the highest reported results yet. Further, we identify the most important features that contribute in improving the prediction.
AB - Surgery planning in patients diagnosed with brain tumor is dependent on their survival prognosis. A poor prognosis might demand for a more aggressive treatment and therapy plan, while a favorable prognosis might enable a less risky surgery plan. Thus, accurate survival prognosis is an important step in treatment planning. Recently, deep learning approaches have been used extensively for brain tumor segmentation followed by the use of deep features for prognosis. However, radiomics-based studies have shown more promise using engineered/hand-crafted features. In this paper, we propose a three-step approach for multi-class survival prognosis. In the first stage, we extract image slices corresponding to tumor regions from multiple magnetic resonance image modalities. We then extract radiomic features from these 2D slices. Finally, we train machine learning classifiers to perform the classification. We evaluate our proposed approach on the publicly available BraTS 2019 data and achieve an accuracy of 76.5% and precision of 74.3% using the random forest classifier, which to the best of our knowledge are the highest reported results yet. Further, we identify the most important features that contribute in improving the prediction.
UR - http://www.scopus.com/inward/record.url?scp=85101572091&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85101572091&partnerID=8YFLogxK
U2 - 10.1007/978-3-030-66843-3_28
DO - 10.1007/978-3-030-66843-3_28
M3 - Conference contribution
AN - SCOPUS:85101572091
SN - 9783030668426
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 284
EP - 293
BT - Machine Learning in Clinical Neuroimaging and Radiogenomics in Neuro-oncology - 3rd International Workshop, MLCN 2020, and Second International Workshop, RNO-AI 2020, Held in Conjunction with MICCAI 2020, Proceedings
A2 - Kia, Seyed Mostafa
A2 - Mohy-ud-Din, Hassan
A2 - Abdulkadir, Ahmed
A2 - Bass, Cher
A2 - Habes, Mohamad
A2 - Rondina, Jane Maryam
A2 - Tax, Chantal
A2 - Wang, Hongzhi
A2 - Wolfers, Thomas
A2 - Rathore, Saima
A2 - Ingalhalikar, Madhura
PB - Springer Science and Business Media Deutschland GmbH
T2 - 3rd International Workshop on Machine Learning in Clinical Neuroimaging, MLCN 2020, and 2nd International Workshop on Radiogenomics in Neuro-oncology, RNO-AI 2020, held in conjunction with MICCAI 2020
Y2 - 4 October 2020 through 8 October 2020
ER -