TY - GEN
T1 - Combining Attention-Based Multiple Instance Learning and Gaussian Processes for CT Hemorrhage Detection
AU - Wu, Yunan
AU - Schmidt, Arne
AU - Hernández-Sánchez, Enrique
AU - Molina, Rafael
AU - Katsaggelos, Aggelos K.
N1 - Funding Information:
Keywords: Attention-based multiple instance learning · Variational Gaussian processes · CT hemorrhage detection This work has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Sk lodowska Curie grant agreement No 860627 (CLARIFY Project) and also from the Spanish Ministry of Science and Innovation under project PID2019-105142RB-C22.
Publisher Copyright:
© 2021, Springer Nature Switzerland AG.
PY - 2021
Y1 - 2021
N2 - Intracranial hemorrhage (ICH) is a life-threatening emergency with high rates of mortality and morbidity. Rapid and accurate detection of ICH is crucial for patients to get a timely treatment. In order to achieve the automatic diagnosis of ICH, most deep learning models rely on huge amounts of slice labels for training. Unfortunately, the manual annotation of CT slices by radiologists is time-consuming and costly. To diagnose ICH, in this work, we propose to use an attention-based multiple instance learning (Att-MIL) approach implemented through the combination of an attention-based convolutional neural network (Att-CNN) and a variational Gaussian process for multiple instance learning (VGPMIL). Only labels at scan-level are necessary for training. Our method (a) trains the model using scan labels and assigns each slice with an attention weight, which can be used to provide slice-level predictions, and (b) uses the VGPMIL model based on low-dimensional features extracted by the Att-CNN to obtain improved predictions both at slice and scan levels. To analyze the performance of the proposed approach, our model has been trained on 1150 scans from an RSNA dataset and evaluated on 490 scans from an external CQ500 dataset. Our method outperforms other methods using the same scan-level training and is able to achieve comparable or even better results than other methods relying on slice-level annotations.
AB - Intracranial hemorrhage (ICH) is a life-threatening emergency with high rates of mortality and morbidity. Rapid and accurate detection of ICH is crucial for patients to get a timely treatment. In order to achieve the automatic diagnosis of ICH, most deep learning models rely on huge amounts of slice labels for training. Unfortunately, the manual annotation of CT slices by radiologists is time-consuming and costly. To diagnose ICH, in this work, we propose to use an attention-based multiple instance learning (Att-MIL) approach implemented through the combination of an attention-based convolutional neural network (Att-CNN) and a variational Gaussian process for multiple instance learning (VGPMIL). Only labels at scan-level are necessary for training. Our method (a) trains the model using scan labels and assigns each slice with an attention weight, which can be used to provide slice-level predictions, and (b) uses the VGPMIL model based on low-dimensional features extracted by the Att-CNN to obtain improved predictions both at slice and scan levels. To analyze the performance of the proposed approach, our model has been trained on 1150 scans from an RSNA dataset and evaluated on 490 scans from an external CQ500 dataset. Our method outperforms other methods using the same scan-level training and is able to achieve comparable or even better results than other methods relying on slice-level annotations.
KW - Attention-based multiple instance learning
KW - CT hemorrhage detection
KW - Variational Gaussian processes
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U2 - 10.1007/978-3-030-87196-3_54
DO - 10.1007/978-3-030-87196-3_54
M3 - Conference contribution
AN - SCOPUS:85116425141
SN - 9783030871956
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 582
EP - 591
BT - Medical Image Computing and Computer Assisted Intervention – MICCAI 2021 - 24th International Conference, Proceedings
A2 - de Bruijne, Marleen
A2 - Cattin, Philippe C.
A2 - Cotin, Stéphane
A2 - Padoy, Nicolas
A2 - Speidel, Stefanie
A2 - Zheng, Yefeng
A2 - Essert, Caroline
PB - Springer Science and Business Media Deutschland GmbH
T2 - 24th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2021
Y2 - 27 September 2021 through 1 October 2021
ER -