TY - JOUR
T1 - Deep learning–based artificial intelligence model for identifying swallow types in esophageal high-resolution manometry
AU - Kou, Wenjun
AU - Galal, Galal Osama
AU - Klug, Matthew William
AU - Mukhin, Vladislav
AU - Carlson, Dustin Allan
AU - Etemadi, Mozziyar
AU - Kahrilas, Peter J.
AU - Pandolfino, John E.
N1 - Funding Information:
This work was supported by P01 DK117824 (JEP) from the Public Health service. In addition, this work was made possible by a grant from the Northwestern Digestive Health Foundation and gifts from Joe and Nives Rizza and The Todd and Renee Schilling Charitable Fund.
Publisher Copyright:
© 2021 John Wiley & Sons Ltd
PY - 2021
Y1 - 2021
N2 - Background: This study aimed to build and evaluate a deep learning, artificial intelligence (AI) model to automatically classify swallow types based on raw data from esophageal high-resolution manometry (HRM). Methods: HRM studies on patients with no history of esophageal surgery were collected including 1,741 studies with 26,115 swallows labeled by swallow type (normal, hypercontractile, weak-fragmented, failed, and premature) by an expert interpreter per the Chicago Classification. The dataset was stratified and split into train/validation/test datasets for model development. Long short-term memory (LSTM), a type of deep-learning AI model, was trained and evaluated. The overall performance and detailed per-swallow type performance were analyzed. The interpretations of the supine swallows in a single study were further used to generate an overall classification of peristalsis. Key Results: The LSTM model for swallow type yielded accuracies from the train/validation/test datasets of 0.86/0.81/0.83. The model's interpretation for study-level classification of peristalsis yielded accuracy of 0.88 in the test dataset. Among model misclassification, 535/698 (77%) swallows and 25/35 (71%) studies were to adjacent categories, for example, normal to weak or normal to ineffective, respectively. Conclusions and Inferences: A deep-learning AI model can automatically and accurately identify the Chicago Classification swallow types and peristalsis classification from raw HRM data. While future work to refine this model and incorporate overall manometric diagnoses are needed, this study demonstrates the role that AI will serve in the interpretation and classification of esophageal HRM studies.
AB - Background: This study aimed to build and evaluate a deep learning, artificial intelligence (AI) model to automatically classify swallow types based on raw data from esophageal high-resolution manometry (HRM). Methods: HRM studies on patients with no history of esophageal surgery were collected including 1,741 studies with 26,115 swallows labeled by swallow type (normal, hypercontractile, weak-fragmented, failed, and premature) by an expert interpreter per the Chicago Classification. The dataset was stratified and split into train/validation/test datasets for model development. Long short-term memory (LSTM), a type of deep-learning AI model, was trained and evaluated. The overall performance and detailed per-swallow type performance were analyzed. The interpretations of the supine swallows in a single study were further used to generate an overall classification of peristalsis. Key Results: The LSTM model for swallow type yielded accuracies from the train/validation/test datasets of 0.86/0.81/0.83. The model's interpretation for study-level classification of peristalsis yielded accuracy of 0.88 in the test dataset. Among model misclassification, 535/698 (77%) swallows and 25/35 (71%) studies were to adjacent categories, for example, normal to weak or normal to ineffective, respectively. Conclusions and Inferences: A deep-learning AI model can automatically and accurately identify the Chicago Classification swallow types and peristalsis classification from raw HRM data. While future work to refine this model and incorporate overall manometric diagnoses are needed, this study demonstrates the role that AI will serve in the interpretation and classification of esophageal HRM studies.
KW - esophageal peristalsis
KW - high-resolution manometry
KW - machine learning
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U2 - 10.1111/nmo.14290
DO - 10.1111/nmo.14290
M3 - Article
C2 - 34709712
AN - SCOPUS:85117933695
JO - Neurogastroenterology and Motility
JF - Neurogastroenterology and Motility
SN - 1350-1925
ER -