Efficient pairwise statistical significance estimation for local sequence alignment using GPU

Keyphrases

• Graphics Processing Unit 100%
• Pairwise Statistical Significance 100%
• Local Sequence Alignment 100%
• Statistical Significance Estimation 100%
• Bioinformatics Methods 16%
• Occupancy 16%
• Data Access 16%
• Performance Evaluation 16%
• Memory Access 16%
• Intel 16%
• Sequence Data 16%
• Estimation Algorithms 16%
• Performance Bottleneck 16%
• Access Characteristics 16%
• Global Memory 16%
• Tile-based 16%
• Number of Threads 16%
• Memory Access Pattern 16%
• NVIDIA 16%
• Sequence Homologs 16%
• Multi-pair 16%
• Optimized Implementation 16%

Computer Science

• Sequence Alignment 100%
• Graphics Processing Unit 100%
• Performance Evaluation 16%
• Estimation Algorithm 16%
• Data Access 16%
• Memory Access 16%
• Performance Bottleneck 16%
• Memory Access Pattern 16%
• Contiguous Memory 16%
• Experimental Result 16%
• Bioinformatics 16%