TY - JOUR
T1 - Enzyme-Directed Functionalization of Designed, Two-Dimensional Protein Lattices
AU - Subramanian, Rohit H.
AU - Suzuki, Yuta
AU - Tallorin, Lorillee
AU - Sahu, Swagat
AU - Thompson, Matthew
AU - Gianneschi, Nathan C.
AU - Burkart, Michael D.
AU - Tezcan, F. Akif
N1 - Funding Information:
Protein design and synthesis, TEM imaging and analysis, and biochemical analyses were supported by the U.S. Department of Energy (Division of Materials Sciences, Office of Basic Energy Sciences, DE-SC0003844). Small molecule and peptide synthesis and characterization of chemically conjugated RIDC3 proteins were supported by AFOSR through a Basic Research Initiative (BRI) grant (FA9550-12-1-0414). R.H.S. was supported by the National Institute of Health Chemical Biology Interfaces Training Grant T32GM112584-01. TEM data were collected at the University of California, San Diego, EM facilities supported by funding to T. S. Baker from the National Institutes of Health (R01-GM033050) and the Agouron Foundation.
Publisher Copyright:
© 2020 American Chemical Society.
PY - 2021/4/6
Y1 - 2021/4/6
N2 - The design and construction of crystalline protein arrays to selectively assemble ordered nanoscale materials have potential applications in sensing, catalysis, and medicine. Whereas numerous designs have been implemented for the bottom-up construction of protein assemblies, the generation of artificial functional materials has been relatively unexplored. Enzyme-directed post-translational modifications are responsible for the functional diversity of the proteome and, thus, could be harnessed to selectively modify artificial protein assemblies. In this study, we describe the use of phosphopantetheinyl transferases (PPTases), a class of enzymes that covalently modify proteins using coenzyme A (CoA), to site-selectively tailor the surface of designed, two-dimensional (2D) protein crystals. We demonstrate that a short peptide (ybbR) or a molecular tag (CoA) can be covalently tethered to 2D arrays to enable enzymatic functionalization using Sfp PPTase. The site-specific modification of two different protein array platforms is facilitated by PPTases to afford both small molecule- and protein-functionalized surfaces with no loss of crystalline order. This work highlights the potential for chemoenzymatic modification of large protein surfaces toward the generation of sophisticated protein platforms reminiscent of the complex landscape of cell surfaces.
AB - The design and construction of crystalline protein arrays to selectively assemble ordered nanoscale materials have potential applications in sensing, catalysis, and medicine. Whereas numerous designs have been implemented for the bottom-up construction of protein assemblies, the generation of artificial functional materials has been relatively unexplored. Enzyme-directed post-translational modifications are responsible for the functional diversity of the proteome and, thus, could be harnessed to selectively modify artificial protein assemblies. In this study, we describe the use of phosphopantetheinyl transferases (PPTases), a class of enzymes that covalently modify proteins using coenzyme A (CoA), to site-selectively tailor the surface of designed, two-dimensional (2D) protein crystals. We demonstrate that a short peptide (ybbR) or a molecular tag (CoA) can be covalently tethered to 2D arrays to enable enzymatic functionalization using Sfp PPTase. The site-specific modification of two different protein array platforms is facilitated by PPTases to afford both small molecule- and protein-functionalized surfaces with no loss of crystalline order. This work highlights the potential for chemoenzymatic modification of large protein surfaces toward the generation of sophisticated protein platforms reminiscent of the complex landscape of cell surfaces.
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U2 - 10.1021/acs.biochem.0c00363
DO - 10.1021/acs.biochem.0c00363
M3 - Article
C2 - 32706243
AN - SCOPUS:85103470147
VL - 60
SP - 1050
EP - 1062
JO - Biochemistry
JF - Biochemistry
SN - 0006-2960
IS - 13
ER -