High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study

Bernhard Kainz; Philip Voglreiter; Michael Sereinigg; Iris Wiederstein-Grasser; Ursula Mayrhauser; Sonja Köstenbauer; Mika Pollari; Rostislav Khlebnikov; Matthias Seise; Tuomas Alhonnoro; Yrjö Häme; Daniel Seider; Ronan Flanagan; Claire Bost; Judith Mühl; David O'Neill; Tingying Peng; Stephen Payne; Daniel Rueckert; Dieter Schmalstieg; Michael Moche; Marina Kolesnik; Philipp Stiegler; Rupert H. Portugaller

doi:10.1109/isbi.2014.6867814

High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study

Bernhard Kainz, Philip Voglreiter, Michael Sereinigg, Iris Wiederstein-Grasser, Ursula Mayrhauser, Sonja Köstenbauer, Mika Pollari, Rostislav Khlebnikov, Matthias Seise, Tuomas Alhonnoro, Yrjö Häme, Daniel Seider, Ronan Flanagan, Claire Bost, Judith Mühl, David O'Neill, Tingying Peng, Stephen Payne, Daniel Rueckert, Dieter SchmalstiegMichael Moche, Marina Kolesnik, Philipp Stiegler, Rupert H. Portugaller

Biomedical Engineering

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

3 Scopus citations

Abstract

Data below 1 mm voxel size is getting more and more common in the clinical practice but it is still hard to obtain a consistent collection of such datasets for medical image processing research. With this paper we provide a large collection of Contrast Enhanced (CE) Computed Tomography (CT) data from porcine animal experiments and describe their acquisition procedure and peculiarities. We have acquired three CE-CT phases at the highest available scanner resolution of 57 porcine livers during induced respiratory arrest. These phases capture contrast enhanced hepatic arteries, portal venous veins and hepatic veins. Therefore, we provide scan data that allows for a highly accurate reconstruction of hepatic vessel trees. Several datasets have been acquired during Radio-Frequency Ablation (RFA) experiments. Hence, many datasets show also artificially induced hepatic lesions, which can be used for the evaluation of structure detection methods.

Original language	English (US)
Title of host publication	2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014
Publisher	Institute of Electrical and Electronics Engineers Inc.
Pages	81-84
Number of pages	4
ISBN (Electronic)	9781467319591
DOIs	https://doi.org/10.1109/isbi.2014.6867814
State	Published - Jul 29 2014
Event	2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014 - Beijing, China Duration: Apr 29 2014 → May 2 2014

Publication series

Name	2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014

Other

Other	2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014
Country/Territory	China
City	Beijing
Period	4/29/14 → 5/2/14

Keywords

Contrast enhanced computed tomography
Liver tumor ablation
Porcine study data

ASJC Scopus subject areas

Biomedical Engineering
Radiology Nuclear Medicine and imaging

Access to Document

10.1109/isbi.2014.6867814

Cite this

Kainz, B., Voglreiter, P., Sereinigg, M., Wiederstein-Grasser, I., Mayrhauser, U., Köstenbauer, S., Pollari, M., Khlebnikov, R., Seise, M., Alhonnoro, T., Häme, Y., Seider, D., Flanagan, R., Bost, C., Mühl, J., O'Neill, D., Peng, T., Payne, S., Rueckert, D., ... Portugaller, R. H. (2014). High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study. In 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014 (pp. 81-84). Article 6867814 (2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/isbi.2014.6867814

Kainz, Bernhard ; Voglreiter, Philip ; Sereinigg, Michael et al. / High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study. 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014. Institute of Electrical and Electronics Engineers Inc., 2014. pp. 81-84 (2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014).

@inproceedings{55919cb18a4e41eea3b4c8071b435387,

title = "High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study",

abstract = "Data below 1 mm voxel size is getting more and more common in the clinical practice but it is still hard to obtain a consistent collection of such datasets for medical image processing research. With this paper we provide a large collection of Contrast Enhanced (CE) Computed Tomography (CT) data from porcine animal experiments and describe their acquisition procedure and peculiarities. We have acquired three CE-CT phases at the highest available scanner resolution of 57 porcine livers during induced respiratory arrest. These phases capture contrast enhanced hepatic arteries, portal venous veins and hepatic veins. Therefore, we provide scan data that allows for a highly accurate reconstruction of hepatic vessel trees. Several datasets have been acquired during Radio-Frequency Ablation (RFA) experiments. Hence, many datasets show also artificially induced hepatic lesions, which can be used for the evaluation of structure detection methods.",

keywords = "Contrast enhanced computed tomography, Liver tumor ablation, Porcine study data",

author = "Bernhard Kainz and Philip Voglreiter and Michael Sereinigg and Iris Wiederstein-Grasser and Ursula Mayrhauser and Sonja K{\"o}stenbauer and Mika Pollari and Rostislav Khlebnikov and Matthias Seise and Tuomas Alhonnoro and Yrj{\"o} H{\"a}me and Daniel Seider and Ronan Flanagan and Claire Bost and Judith M{\"u}hl and David O'Neill and Tingying Peng and Stephen Payne and Daniel Rueckert and Dieter Schmalstieg and Michael Moche and Marina Kolesnik and Philipp Stiegler and Portugaller, {Rupert H.}",

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year = "2014",

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doi = "10.1109/isbi.2014.6867814",

language = "English (US)",

series = "2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014",

publisher = "Institute of Electrical and Electronics Engineers Inc.",

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Kainz, B, Voglreiter, P, Sereinigg, M, Wiederstein-Grasser, I, Mayrhauser, U, Köstenbauer, S, Pollari, M, Khlebnikov, R, Seise, M, Alhonnoro, T, Häme, Y, Seider, D, Flanagan, R, Bost, C, Mühl, J, O'Neill, D, Peng, T, Payne, S, Rueckert, D, Schmalstieg, D, Moche, M, Kolesnik, M, Stiegler, P & Portugaller, RH 2014, High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study. in 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014., 6867814, 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014, Institute of Electrical and Electronics Engineers Inc., pp. 81-84, 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014, Beijing, China, 4/29/14. https://doi.org/10.1109/isbi.2014.6867814

High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study. / Kainz, Bernhard; Voglreiter, Philip; Sereinigg, Michael et al.
2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014. Institute of Electrical and Electronics Engineers Inc., 2014. p. 81-84 6867814 (2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

TY - GEN

T1 - High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study

AU - Kainz, Bernhard

AU - Voglreiter, Philip

AU - Sereinigg, Michael

AU - Wiederstein-Grasser, Iris

AU - Mayrhauser, Ursula

AU - Köstenbauer, Sonja

AU - Pollari, Mika

AU - Khlebnikov, Rostislav

AU - Seise, Matthias

AU - Alhonnoro, Tuomas

AU - Häme, Yrjö

AU - Seider, Daniel

AU - Flanagan, Ronan

AU - Bost, Claire

AU - Mühl, Judith

AU - O'Neill, David

AU - Peng, Tingying

AU - Payne, Stephen

AU - Rueckert, Daniel

AU - Schmalstieg, Dieter

AU - Moche, Michael

AU - Kolesnik, Marina

AU - Stiegler, Philipp

AU - Portugaller, Rupert H.

PY - 2014/7/29

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N2 - Data below 1 mm voxel size is getting more and more common in the clinical practice but it is still hard to obtain a consistent collection of such datasets for medical image processing research. With this paper we provide a large collection of Contrast Enhanced (CE) Computed Tomography (CT) data from porcine animal experiments and describe their acquisition procedure and peculiarities. We have acquired three CE-CT phases at the highest available scanner resolution of 57 porcine livers during induced respiratory arrest. These phases capture contrast enhanced hepatic arteries, portal venous veins and hepatic veins. Therefore, we provide scan data that allows for a highly accurate reconstruction of hepatic vessel trees. Several datasets have been acquired during Radio-Frequency Ablation (RFA) experiments. Hence, many datasets show also artificially induced hepatic lesions, which can be used for the evaluation of structure detection methods.

AB - Data below 1 mm voxel size is getting more and more common in the clinical practice but it is still hard to obtain a consistent collection of such datasets for medical image processing research. With this paper we provide a large collection of Contrast Enhanced (CE) Computed Tomography (CT) data from porcine animal experiments and describe their acquisition procedure and peculiarities. We have acquired three CE-CT phases at the highest available scanner resolution of 57 porcine livers during induced respiratory arrest. These phases capture contrast enhanced hepatic arteries, portal venous veins and hepatic veins. Therefore, we provide scan data that allows for a highly accurate reconstruction of hepatic vessel trees. Several datasets have been acquired during Radio-Frequency Ablation (RFA) experiments. Hence, many datasets show also artificially induced hepatic lesions, which can be used for the evaluation of structure detection methods.

KW - Contrast enhanced computed tomography

KW - Liver tumor ablation

KW - Porcine study data

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M3 - Conference contribution

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T3 - 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014

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BT - 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014

PB - Institute of Electrical and Electronics Engineers Inc.

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Kainz B, Voglreiter P, Sereinigg M, Wiederstein-Grasser I, Mayrhauser U, Köstenbauer S et al. High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study. In 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014. Institute of Electrical and Electronics Engineers Inc. 2014. p. 81-84. 6867814. (2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014). doi: 10.1109/isbi.2014.6867814

High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study

Abstract

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Keywords

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