TY - JOUR
T1 - Machine learning classification of chronic traumatic brain injury using diffusion tensor imaging and NODDI
T2 - A replication and extension study
AU - Maurer, J. Michael
AU - Harenski, Keith A.
AU - Paul, Subhadip
AU - Vergara, Victor M.
AU - Stephenson, David D.
AU - Gullapalli, Aparna R.
AU - Anderson, Nathaniel E.
AU - Clarke, Gerard J.B.
AU - Nyalakanti, Prashanth K.
AU - Harenski, Carla L.
AU - Decety, Jean
AU - Mayer, Andrew R.
AU - Arciniegas, David B.
AU - Calhoun, Vince D.
AU - Parrish, Todd B.
AU - Kiehl, Kent A.
N1 - Publisher Copyright:
© 2023 The Authors
PY - 2023/3
Y1 - 2023/3
N2 - Individuals with acute and chronic traumatic brain injury (TBI) are associated with unique white matter (WM) structural abnormalities, including fractional anisotropy (FA) differences. Our research group previously used FA as a feature in a linear support vector machine (SVM) pattern classifier, observing high classification between individuals with and without acute TBI (i.e., an area under the curve [AUC] value of 75.50%). However, it is not known whether FA could similarly classify between individuals with and without history of chronic TBI. Here, we attempted to replicate our previous work with a new sample, investigating whether FA could similarly classify between incarcerated men with (n = 80) and without (n = 80) self-reported history of chronic TBI. Additionally, given limitations associated with FA, including underestimation of FA values in WM tracts containing crossing fibers, we extended upon our previous study by incorporating neurite orientation dispersion and density imaging (NODDI) metrics, including orientation dispersion (ODI) and isotropic volume (Viso). A linear SVM based classification approach, similar to our previous study, was incorporated here to classify between individuals with and without self-reported chronic TBI using FA and NODDI metrics as separate features. Overall classification rates were similar when incorporating FA and NODDI ODI metrics as features (AUC: 82.50%). Additionally, NODDI-based metrics provided the highest sensitivity (ODI: 85.00%) and specificity (Viso: 82.50%) rates. The current study serves as a replication and extension of our previous study, observing that multiple diffusion MRI metrics can reliably classify between individuals with and without self-reported history of chronic TBI.
AB - Individuals with acute and chronic traumatic brain injury (TBI) are associated with unique white matter (WM) structural abnormalities, including fractional anisotropy (FA) differences. Our research group previously used FA as a feature in a linear support vector machine (SVM) pattern classifier, observing high classification between individuals with and without acute TBI (i.e., an area under the curve [AUC] value of 75.50%). However, it is not known whether FA could similarly classify between individuals with and without history of chronic TBI. Here, we attempted to replicate our previous work with a new sample, investigating whether FA could similarly classify between incarcerated men with (n = 80) and without (n = 80) self-reported history of chronic TBI. Additionally, given limitations associated with FA, including underestimation of FA values in WM tracts containing crossing fibers, we extended upon our previous study by incorporating neurite orientation dispersion and density imaging (NODDI) metrics, including orientation dispersion (ODI) and isotropic volume (Viso). A linear SVM based classification approach, similar to our previous study, was incorporated here to classify between individuals with and without self-reported chronic TBI using FA and NODDI metrics as separate features. Overall classification rates were similar when incorporating FA and NODDI ODI metrics as features (AUC: 82.50%). Additionally, NODDI-based metrics provided the highest sensitivity (ODI: 85.00%) and specificity (Viso: 82.50%) rates. The current study serves as a replication and extension of our previous study, observing that multiple diffusion MRI metrics can reliably classify between individuals with and without self-reported history of chronic TBI.
KW - Fractional anisotropy
KW - Machine learning
KW - NODDI
KW - Pattern classifier
KW - Replication study
KW - Traumatic brain injury
UR - http://www.scopus.com/inward/record.url?scp=85149600733&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85149600733&partnerID=8YFLogxK
U2 - 10.1016/j.ynirp.2023.100157
DO - 10.1016/j.ynirp.2023.100157
M3 - Article
C2 - 37169013
AN - SCOPUS:85149600733
SN - 2666-9560
VL - 3
JO - Neuroimage: Reports
JF - Neuroimage: Reports
IS - 1
M1 - 100157
ER -