Abstract
Influenza A virus M2 (A/M2) forms a homotetrameric proton selective channel in the viral membrane. It has been the drug target of antiviral drugs such as amantadine and rimantadine. However, most of the current virulent influenza A viruses carry drug-resistant mutations alongside the drug binding site, such as S31N, V27A, and L26F, etc., each of which might be dominant in a given flu season. Among these mutations, the V27A mutation was prevalent among transmissible viruses under drug selection pressure. Until now, V27A has not been successfully targeted by small molecule inhibitors, despite years of extensive medicinal chemistry research efforts and high throughput screening. Guided by molecular dynamics (MD) simulation of drug binding and the influence of drug binding on the dynamics of A/M2 from earlier experimental studies, we designed a series of potent spirane amine inhibitors targeting not only WT, but also both A/M2-27A and L26F mutants with IC 50s similar to that seen for amantadine's inhibition of the WT channel. The potencies of these inhibitors were further demonstrated in experimental binding and plaque reduction assays. These results demonstrate the power of MD simulations to probe the mechanism of drug binding as well as the ability to guide design of inhibitors of targets that had previously appeared to be undruggable.
Original language | English (US) |
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Pages (from-to) | 12834-12841 |
Number of pages | 8 |
Journal | Journal of the American Chemical Society |
Volume | 133 |
Issue number | 32 |
DOIs | |
State | Published - Aug 17 2011 |
ASJC Scopus subject areas
- General Chemistry
- Biochemistry
- Catalysis
- Colloid and Surface Chemistry
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CCDC 824269: Experimental Crystal Structure Determination
Wang, J. (Creator), Ma, C. (Creator), Fiorin, G. (Creator), Carnevale, V. (Creator), Wang, T. (Creator), Hu, F. (Creator), Lamb, R. A. (Creator), Pinto, L. H. (Creator), Hong, M. (Creator), Klein, M. L. (Creator) & Degrado, W. F. (Contributor), Cambridge Crystallographic Data Centre, 2011
DOI: 10.5517/ccwnqbk, http://www.ccdc.cam.ac.uk/services/structure_request?id=doi:10.5517/ccwnqbk&sid=DataCite
Dataset