TY - JOUR
T1 - Phosphoproteomic and transcriptomic analyses reveal multiple functions for Aspergillus nidulans MpkA independent of cell wall stress
AU - Chelius, Cynthia L.
AU - Ribeiro, Liliane F.C.
AU - Huso, Walker
AU - Kumar, Jyothi
AU - Lincoln, Stephen
AU - Tran, Bao
AU - Goo, Young Ah
AU - Srivastava, Ranjan
AU - Harris, Steven D.
AU - Marten, Mark R.
N1 - Funding Information:
This work was supported by the National Science Foundation (Awards 1517309 , 1517133 , and 151690 ). The UNMC DNA Sequencing Core Facility receives partial support from the Nebraska Research Network In Functional Genomics NE-INBRE P20GM103427-14 , The Molecular Biology of Neurosensory Systems CoBRE P30GM110768 , The Fred & Pamela Buffett Cancer Center – P30CA036727 , The Center for Root and Rhizobiome Innovation (CRRI) 36-5150-2085-20 , and the Nebraska Research Initiative .
Publisher Copyright:
© 2019 Elsevier Inc.
PY - 2019/4
Y1 - 2019/4
N2 - The protein kinase MpkA plays a prominent role in the cell wall integrity signaling (CWIS) pathway, acting as the terminal MAPK activating expression of genes which encode cell wall biosynthetic enzymes and other repair functions. Numerous studies focus on MpkA function during cell wall perturbation. Here, we focus on the role MpkA plays outside of cell wall stress, during steady state growth. In an effort to seek other, as yet unknown, connections to this pathway, an mpkA deletion mutant (ΔmpkA) was subjected to phosphoproteomic and transcriptomic analysis. When compared to the control (isogenic parent of ΔmpkA), there is strong evidence suggesting MpkA is involved with maintaining cell wall strength, branching regulation, and the iron starvation pathway, among others. Particle-size analysis during shake flask growth revealed ΔmpkA mycelia were about 4 times smaller than the control strain and more than 90 cell wall related genes show significantly altered expression levels. The deletion mutant had a significantly higher branching rate than the control and phosphoproteomic results show putative branching-regulation proteins, such as CotA, LagA, and Cdc24, have a significantly different level of phosphorylation. When grown in iron limited conditions, ΔmpkA had no difference in growth rate or production of siderophores, whereas the control strain showed decreased growth rate and increased siderophore production. Transcriptomic data revealed over 25 iron related genes with altered transcript levels. Results suggest MpkA is involved with regulation of broad cellular functions in the absence of stress.
AB - The protein kinase MpkA plays a prominent role in the cell wall integrity signaling (CWIS) pathway, acting as the terminal MAPK activating expression of genes which encode cell wall biosynthetic enzymes and other repair functions. Numerous studies focus on MpkA function during cell wall perturbation. Here, we focus on the role MpkA plays outside of cell wall stress, during steady state growth. In an effort to seek other, as yet unknown, connections to this pathway, an mpkA deletion mutant (ΔmpkA) was subjected to phosphoproteomic and transcriptomic analysis. When compared to the control (isogenic parent of ΔmpkA), there is strong evidence suggesting MpkA is involved with maintaining cell wall strength, branching regulation, and the iron starvation pathway, among others. Particle-size analysis during shake flask growth revealed ΔmpkA mycelia were about 4 times smaller than the control strain and more than 90 cell wall related genes show significantly altered expression levels. The deletion mutant had a significantly higher branching rate than the control and phosphoproteomic results show putative branching-regulation proteins, such as CotA, LagA, and Cdc24, have a significantly different level of phosphorylation. When grown in iron limited conditions, ΔmpkA had no difference in growth rate or production of siderophores, whereas the control strain showed decreased growth rate and increased siderophore production. Transcriptomic data revealed over 25 iron related genes with altered transcript levels. Results suggest MpkA is involved with regulation of broad cellular functions in the absence of stress.
KW - Aspergillus nidulans
KW - Branching
KW - Cell wall
KW - Iron regulation
KW - MpkA
KW - Multi-omics
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U2 - 10.1016/j.fgb.2019.01.003
DO - 10.1016/j.fgb.2019.01.003
M3 - Article
C2 - 30639305
AN - SCOPUS:85060138750
SN - 1087-1845
VL - 125
SP - 1
EP - 12
JO - Fungal Genetics and Biology
JF - Fungal Genetics and Biology
ER -