Predictors of global methylation levels in blood DNA of healthy subjects: A combined analysis

Zhong Zheng Zhu, Lifang Hou, Valentina Bollati, Letizia Tarantini, Barbara Marinelli, Laura Cantone, Allen S. Yang, Pantel Vokonas, Jolanta Lissowska, Silvia Fustinoni, Angela C. Pesatori, Matteo Bonzini, Pietro Apostoli, Giovanni Costa, Pier Alberto Bertazzi, Wong Ho Chow, Joel Schwartz, Andrea Baccarelli*

*Corresponding author for this work

Research output: Contribution to journalArticle

153 Scopus citations

Abstract

Background: Estimates of global DNA methylation from repetitive DNA elements, such as Alu and LINE-1, have been increasingly used in epidemiological investigations because of their relative low-cost, high-throughput and quantitative results. Nevertheless, determinants of these methylation measures in healthy individuals are still largely unknown. The aim of this study was to examine whether age, gender, smoking habits, alcohol drinking and body mass index (BMI) are associated with Alu or LINE-1 methylation levels in blood leucocyte DNA of healthy individuals. Methods: Individual data from five studies including a total of 1465 healthy subjects were combined. DNA methylation was quantified by PCR-pyrosequencing. Results: Age [β = -0.011% of 5-methyl-cytosine (%5mC)/year, 95% confidence interval (CI) -0.020 to -0.001%5mC/year] and alcohol drinking (β = -0.214, 95% CI -0.415 to -0.013) were inversely associated with Alu methylation. Compared with females, males had lower Alu methylation (β = -0.385, 95% CI -0.665 to -0.104) and higher LINE-1 methylation (β = 0.796, 95% CI 0.261 to 1.330). No associations were found with smoking or BMI. Percent neutrophils and lymphocytes in blood counts exhibited a positive (β = 0.036, 95% CI 0.010 to 0.061) and negative (β = -0.038, 95% CI -0.065 to -0.012) association with LINE-1 methylation, respectively. Conclusions: Global methylation measures in blood DNA vary in relation with certain host and lifestyle characteristics, including age, gender, alcohol drinking and white blood cell counts. These findings need to be considered in designing epidemiological investigations aimed at identifying associations between DNA methylation and health outcomes. Published by Oxford University Press on behalf of the International Epidemiological Association

Original languageEnglish (US)
Article numberdyq154
Pages (from-to)126-139
Number of pages14
JournalInternational journal of epidemiology
Volume41
Issue number1
DOIs
StatePublished - Feb 2012

Keywords

  • Blood
  • DNA methylation
  • Epigenetics
  • Meta-analysis
  • Repetitive elements

ASJC Scopus subject areas

  • Epidemiology

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    Zhu, Z. Z., Hou, L., Bollati, V., Tarantini, L., Marinelli, B., Cantone, L., Yang, A. S., Vokonas, P., Lissowska, J., Fustinoni, S., Pesatori, A. C., Bonzini, M., Apostoli, P., Costa, G., Bertazzi, P. A., Chow, W. H., Schwartz, J., & Baccarelli, A. (2012). Predictors of global methylation levels in blood DNA of healthy subjects: A combined analysis. International journal of epidemiology, 41(1), 126-139. [dyq154]. https://doi.org/10.1093/ije/dyq154