TY - GEN
T1 - Sparse regression models of pain perception
AU - Rish, Irina
AU - Cecchi, Guillermo A.
AU - Baliki, Marwan N.
AU - Apkarian, A. Vania
N1 - Funding Information:
Marwan N. Baliki was supported by an anonymous donor; A. Vania Apkarian and experimental work were supported by NIH/NINDS grant NS35115.
PY - 2010
Y1 - 2010
N2 - Discovering brain mechanisms underlying pain perception remains a challenging neuroscientific problem with important practical applications, such as developing better treatments for chronic pain. Herein, we focus on statistical analysis of functional MRI (fMRI) data associated with pain stimuli. While the traditional mass-univariate GLM [8] analysis of pain-related brain activation can miss potentially informative voxel interaction patterns, our approach relies instead on multivariate predictive modeling methods such as sparse regression (LASSO [17] and, more generally, Elastic Net (EN) ([18]) that can learn accurate predictive models of pain and simultaneously discover brain activity patterns (relatively small subsets of voxels) allowing for such predictions. Moreover, we investigate the effect of temporal (time-lagged) information, often ignored in traditional fMRI studies, on the predictive accuracy and on the selection of brain areas relevant to pain perception. We demonstrate that (1) Elastic Net regression can be highly predictive of pain perception, by far outperforming ordinary least-squares (OLS) linear regression; (2) temporal information is very important for pain perception modeling and can significantly increase the prediction accuracy; (3) moreover, regression models that incorporate temporal information discover brain activation patterns undetected by non-temporal models.
AB - Discovering brain mechanisms underlying pain perception remains a challenging neuroscientific problem with important practical applications, such as developing better treatments for chronic pain. Herein, we focus on statistical analysis of functional MRI (fMRI) data associated with pain stimuli. While the traditional mass-univariate GLM [8] analysis of pain-related brain activation can miss potentially informative voxel interaction patterns, our approach relies instead on multivariate predictive modeling methods such as sparse regression (LASSO [17] and, more generally, Elastic Net (EN) ([18]) that can learn accurate predictive models of pain and simultaneously discover brain activity patterns (relatively small subsets of voxels) allowing for such predictions. Moreover, we investigate the effect of temporal (time-lagged) information, often ignored in traditional fMRI studies, on the predictive accuracy and on the selection of brain areas relevant to pain perception. We demonstrate that (1) Elastic Net regression can be highly predictive of pain perception, by far outperforming ordinary least-squares (OLS) linear regression; (2) temporal information is very important for pain perception modeling and can significantly increase the prediction accuracy; (3) moreover, regression models that incorporate temporal information discover brain activation patterns undetected by non-temporal models.
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U2 - 10.1007/978-3-642-15314-3_20
DO - 10.1007/978-3-642-15314-3_20
M3 - Conference contribution
AN - SCOPUS:78249245401
SN - 3642153135
SN - 9783642153136
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 212
EP - 223
BT - Brain Informatics - International Conference, BI 2010, Proceedings
T2 - 2010 International Conference on Brain Informatics, BI 2010
Y2 - 28 August 2010 through 30 August 2010
ER -