Stochastic fluorescence switching of nucleic acids under visible light illumination

Biqin Dong, Luay M. Almassalha, Brian T. Soetikno, John E. Chandler, The Quyen Nguyen, Ben E. Urban, Cheng Sun, Hao F. Zhang, Vadim Backman

Research output: Contribution to journalArticlepeer-review

10 Scopus citations

Abstract

We report detailed characterizations of stochastic fluorescence switching of unmodified nucleic acids under visible light illumination. Although the fluorescent emission from nucleic acids under the visible light illumination has long been overlooked due to their apparent low absorption cross section, our quantitative characterizations reveal the high quantum yield and high photon count in individual fluorescence emission events of nucleic acids at physiological concentrations. Owing to these characteristics, the stochastic fluorescence switching of nucleic acids could be comparable to that of some of the most potent exogenous fluorescence probes for localization-based super-resolution imaging. Therefore, utilizing the principle of single-molecule photon-localization microscopy, native nucleic acids could be ideal candidates for optical label-free super-resolution imaging.

Original languageEnglish (US)
Pages (from-to)7929-7944
Number of pages16
JournalOptics Express
Volume25
Issue number7
DOIs
StatePublished - Apr 3 2017

Funding

National Institutes of Health (NIH) (R24EY022883, DP3DK108248, F30EY026472, U54CA193419, R01CA165309, T32GM008152, T32HL076139); National Science Foundation (NSF) (DBI-1353952, DGE-0824162, CBET-1055379, CBET-1240416, EEC-1530734); Research Catalyst Award by Northwestern McCormick School of Engineering. We thank Dr. Michael R. Wasielewski for the support in photochemistry studies and Dr. Ryan M. Young and Mr. Yilei Wu for their assistance in spectroscopic measurements. We thank the Integrated Molecular Structure Education and Research Center at Northwestern University for mass spectrometry measurements. We thank Dr. Arabela Grigorescu and Theint Aung from the Northwestern University Keck Biophysics Core Facility for their assistance in size exclusion chromatography of polynucleotides.

ASJC Scopus subject areas

  • Atomic and Molecular Physics, and Optics

Fingerprint

Dive into the research topics of 'Stochastic fluorescence switching of nucleic acids under visible light illumination'. Together they form a unique fingerprint.

Cite this