15N detection harnesses the slow relaxation property of nitrogen: Delivering enhanced resolution for intrinsically disordered proteins

Sandeep Chhabra, Patrick Fischer, Koh Takeuchi, Abhinav Dubey, Joshua J. Ziarek, Andras Boeszoermenyi, Daniel Mathieu, Wolfgang Bermel, Norman E. Davey, Gerhard Wagner*, Haribabu Arthanari

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

41 Scopus citations

Abstract

Studies over the past decade have highlighted the functional significance of intrinsically disordered proteins (IDPs). Due to conformational heterogeneity and inherent dynamics, structural studies of IDPs have relied mostly on NMR spectroscopy, despite IDPs having characteristics that make them challenging to study using traditional 1H-detected biomolecular NMR techniques. Here, we develop a suite of 3D 15N-detected experiments that take advantage of the slower transverse relaxation property of 15N nuclei, the associated narrower linewidth, and the greater chemical shift dispersion compared with those of 1H and 13C resonances. The six 3D experiments described here start with aliphatic 1H magnetization to take advantage of its higher initial polarization, and are broadly applicable for backbone assignment of proteins that are disordered, dynamic, or have unfavorable amide proton exchange rates. Using these experiments, backbone resonance assignments were completed for the unstructured regulatory domain (residues 131–294) of the human transcription factor nuclear factor of activated T cells (NFATC2), which includes 28 proline residues located in functionally important serine–proline (SP) repeats. The complete assignment of the NFATC2 regulatory domain enabled us to study phosphorylation of NFAT by kinase PKA and phosphorylation-dependent binding of chaperone protein 14-3-3 to NFAT, providing mechanistic insight on how 14-3-3 regulates NFAT nuclear translocation.

Original languageEnglish (US)
Pages (from-to)E1710-E1719
JournalProceedings of the National Academy of Sciences of the United States of America
Volume115
Issue number8
DOIs
StatePublished - Feb 20 2018

Funding

ACKNOWLEDGMENTS. We thank Kendra E. Leigh for the insightful discussions regarding the work presented here. This work was supported by NIH Grants GM047467 and AI03758 (to G.W.). S.C. acknowledges National Health and Medical Research Council Australia for the C. J. Martin Fellowship. H.A. acknowledges funding from Claudia Adams Barr Program for Innovative Cancer Research. J.J.Z. was supported by NIH Grant K99 GM115814. A.B. thanks Fonds zur Förderung der Wissenschaftlichen Forschung (Project J3872-B21) for support. Maintenance of some of the instruments used for this research was supported by NIH Grant EB002026. Funding was also provided by Japan Science and Technology Agency, Precursory Research for Embryonic Science and Technology (Grant JPMJPR14L5, to K.T.). We thank Kendra E. Leigh for the insightful discussions regarding the work presented here. This work was supported by NIH Grants GM047467 and AI03758 (to G.W.). S.C. acknowledges National Health and Medical Research Council Australia for the C. J. Martin Fellowship. H.A. acknowledges funding from Claudia Adams Barr Program for Innovative Cancer Research. J.J.Z. was supported by NIH Grant K99 GM115814. A.B. thanks Fonds zur Förderung der Wissenschaftlichen Forschung (Project J3872-B21) for support. Maintenance of some of the instruments used for this research was supported by NIH Grant EB002026. Funding was also provided by Japan Science and Technology Agency, Precursory Research for Embryonic Science and Technology (Grant JPMJPR14L5, to K.T.).

Keywords

  • 15N detection
  • IDP
  • NFAT
  • NMR resonance assignment
  • Nuclear localization

ASJC Scopus subject areas

  • General

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