Abstract
Several genes of the dopaminergic and glutamatergic neurotransmitter systems have been found to be associated with alcohol disease and related intermediate phenotypes. Here, we evaluated genetic variants of the catechol-O-methyltransferase (COMT) and the metabotropic glutamate receptor 3 (mGluR3) genes in alcohol-dependent patients and their association with volumetric measurements of brain structures. By combined analysis of imaging data and genotyping results, large numbers of variables are produced that overstrain conventional statistical methods based on tests for group differences. Limitations in assessment of epistatic effects and multiple testing problems are encountered. Therefore, we introduce a novel method for detecting associations between a set of genetic markers and phenotypical measurements based on machine learning techniques. Hippocampal volume was found to be associated with epistatic effects of the COMT-mGluR3 genes in alcohol-dependent patients but not in controls. These data are in line with prior studies supporting a role for dopamine-glutamate interaction in modulation of alcohol disease.
Original language | English (US) |
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Pages (from-to) | 126-136 |
Number of pages | 11 |
Journal | Biological Psychology |
Volume | 79 |
Issue number | 1 |
DOIs | |
State | Published - Sep 2008 |
Funding
We are grateful to all patients and control subjects for their study participation. We also thank Anne Beck for assistance with the figure design. This work was funded by the Bernstein Center for Computational Neuroscience Berlin (BMBF grant 01GQ0411) and the Deutsche Forschungsgemeinschaft (He 2597-4-3). Quantitative phenotype information from the MGH Phenotype–Genotype Project was supported by a grant (DABK39-03-C-0098) from the Office of National Drug Control Policy, Counterdrug Technology Assessment Center (ONDCP-CTAC), Washington, DC.
Keywords
- Alcohol addiction
- COMT
- Dopamine
- Glutamate
- Hippocampal volume
- Machine learning
- P-SVM
- Variable selection
- mGluR3
ASJC Scopus subject areas
- Neuropsychology and Physiological Psychology
- General Neuroscience