TY - JOUR
T1 - The Human Proteoform Atlas
T2 - A FAIR community resource for experimentally derived proteoforms
AU - Hollas, Michael A.R.
AU - Robey, Matthew T.
AU - Fellers, Ryan T.
AU - Leduc, Richard D.
AU - Thomas, Paul M.
AU - Kelleher, Neil L.
N1 - Publisher Copyright:
© 2022 The Author(s). Published by Oxford University Press on behalf of Nucleic Acids Research.
PY - 2022/1/7
Y1 - 2022/1/7
N2 - The Human Proteoform Atlas (HPfA) is a web-based repository of experimentally verified human proteoforms on-line at http://human-proteoform-atlas.org and is a direct descendant of the Consortium of Top-Down Proteomics' (CTDP) Proteoform Atlas. Proteoforms are the specific forms of protein molecules expressed by our cells and include the unique combination of post-translational modifications (PTMs), alternative splicing and other sources of variation deriving from a specific gene. The HPfA uses a FAIR system to assign persistent identifiers to proteoforms which allows for redundancy calling and tracking from prior and future studies in the growing community of proteoform biology and measurement. The HPfA is organized around open ontologies and enables flexible classification of proteoforms. To achieve this, a public registry of experimentally verified proteoforms was also created. Submission of new proteoforms can be processed through email [email protected], and future iterations of these proteoform atlases will help to organize and assign function to proteoforms, their PTMs and their complexes in the years ahead.
AB - The Human Proteoform Atlas (HPfA) is a web-based repository of experimentally verified human proteoforms on-line at http://human-proteoform-atlas.org and is a direct descendant of the Consortium of Top-Down Proteomics' (CTDP) Proteoform Atlas. Proteoforms are the specific forms of protein molecules expressed by our cells and include the unique combination of post-translational modifications (PTMs), alternative splicing and other sources of variation deriving from a specific gene. The HPfA uses a FAIR system to assign persistent identifiers to proteoforms which allows for redundancy calling and tracking from prior and future studies in the growing community of proteoform biology and measurement. The HPfA is organized around open ontologies and enables flexible classification of proteoforms. To achieve this, a public registry of experimentally verified proteoforms was also created. Submission of new proteoforms can be processed through email [email protected], and future iterations of these proteoform atlases will help to organize and assign function to proteoforms, their PTMs and their complexes in the years ahead.
UR - http://www.scopus.com/inward/record.url?scp=85123229676&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85123229676&partnerID=8YFLogxK
U2 - 10.1093/nar/gkab1086
DO - 10.1093/nar/gkab1086
M3 - Article
C2 - 34986596
AN - SCOPUS:85123229676
SN - 0305-1048
VL - 50
SP - D526-D533
JO - Nucleic acids research
JF - Nucleic acids research
IS - D1
ER -