Translocation of polymers out of confined geometries

Erik Luijten*, Angelo Cacciuto

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

2 Scopus citations

Abstract

We consider the free energy of confinement for a flexible self-avoiding polymer inside a spherical cavity. Accurate numerical calculations allow us to arbitrate between competing scaling predictions. We find that, for moderate confinement, the free energy exhibits a power-law dependence on cavity size that is different from what is observed for planar and cylindrical confinement. At high monomer concentrations, crossover to another scaling regime occurs. One of the consequences of these findings is a new prediction for the escape time of a polymer from a spherical confinement. By means of additional simulations, we confirm that the translocation time can be described by a scaling law that exhibits a nonlinear dependence on the degree of polymerization that is sensitive to the nature of the confining geometry. The geometry dependence contradicts earlier predictions but is in quantitative agreement with findings for the free energy of confinement.

Original languageEnglish (US)
Pages (from-to)150-153
Number of pages4
JournalComputer Physics Communications
Volume177
Issue number1-2 SPEC. ISS.
DOIs
StatePublished - Jul 2007

Keywords

  • Confinement
  • Polymers
  • Translocation

ASJC Scopus subject areas

  • Hardware and Architecture
  • Physics and Astronomy(all)

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