Using machine learning to develop smart reflex testing protocols

Matthew McDermott, Anand Dighe, Peter Szolovits, Yuan Luo, Jason Baron*

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

6 Scopus citations

Abstract

Objective: Reflex testing protocols allow clinical laboratories to perform second line diagnostic tests on existing specimens based on the results of initially ordered tests. Reflex testing can support optimal clinical laboratory test ordering and diagnosis. In current clinical practice, reflex testing typically relies on simple "if-then"rules; however, this limits the opportunities for reflex testing since most test ordering decisions involve more complexity than traditional rule-based approaches would allow. Here, using the analyte ferritin as an example, we propose an alternative machine learning-based approach to "smart"reflex testing. Methods: Using deidentified patient data, we developed a machine learning model to predict whether a patient getting CBC testing will also have ferritin testing ordered. We evaluate applications of this model to reflex testing by assessing its performance in comparison to possible rule-based approaches. Results: Our underlying machine learning models performed moderately well in predicting ferritin test ordering (AUC=0.731 in reference to actual ordering) and demonstrated promising potential to underlie key clinical applications. In contrast, none of the many traditionally framed, rule-based, hypothetical reflex protocols we evaluated offered sufficient agreement with actual ordering to be clinically feasible. Using chart review, we further demonstrated that the strategic deployment of our model could avoid important ferritin test ordering errors. Conclusions: Machine learning may provide a foundation for new types of reflex testing with enhanced benefits for clinical diagnosis.

Original languageEnglish (US)
Pages (from-to)416-425
Number of pages10
JournalJournal of the American Medical Informatics Association
Volume31
Issue number2
DOIs
StatePublished - Feb 1 2024

Funding

This work was support by National Library Medicine (grant number R01 LM013337).

Keywords

  • clinical decision support
  • computational pathology
  • ferritin
  • imputation
  • laboratory test ordering
  • machine learning
  • missing data

ASJC Scopus subject areas

  • Health Informatics

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